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The map label for this gene is rsmD [H]

Identifier: 91781707

GI number: 91781707

Start: 358883

End: 359497

Strand: Direct

Name: rsmD [H]

Synonym: Bxe_A4139

Alternate gene names: 91781707

Gene position: 358883-359497 (Clockwise)

Preceding gene: 91781705

Following gene: 91781708

Centisome position: 7.33

GC content: 66.02

Gene sequence:

>615_bases
ATGCCCCGTTCCGCACCTTCGCGCGCCCAAGGCGCTTCATCCAAAGGCGGCAAGCCGCACGCCATCCGTATCATAGGCGG
CGACTGGAAACGCACGCCGCTGCCCGTGCTCGATCTCGACGGCTTGCGCCCCACGCCCGATCGCGTGCGCGAGACGCTAT
TCAACTGGCTCGGCCAGAATCTGGAGGGCCAGCGCTGTCTCGATCTGTTCGCCGGCAGCGGCGCGCTCGGCTTCGAGGCG
GCGTCGCGCGGCGCGGCCCGGGTATTGATGGTGGAGCGCAATGCGCGGGCCGCCGGCCAGTTGCGCGCCAACCAGGAACG
CCTGTCGGCGCGCACGATCGAAATCGCTGAAGCCGACGGTTTGCGCCTTGCCGCGAGTCTCGCGCCCGGATCGTTCGACG
TGGTGTTTCTCGACCCGCCGTTCGGCACGGATCTGCTCGGCAAAGCCCTTGCGCTGGCGGCGCCGCTAGTGAGCGCTAAC
GGATTTCTGTATGTGGAAGCGGGAGAGGCGCTCGAACTCGAGGGTAACGAGACGCTCGCCGGCTGGGAAATCGTGCGGCA
AGGTAAAGCGGGCGCTGTCCACTTTCATTTGCTGCAGCGCGAAAATAAGGAATAA

Upstream 100 bases:

>100_bases
GAACGGCCAGGCTGGACGCGCGGCGTCGCTGTGGTAACGTTGGCGCTCCGGCCCTCACGTATCGACGTCGCGGGCGCTTT
CAAAACGTAATCGAAACTGC

Downstream 100 bases:

>100_bases
TGCGCGTTCCAAAACAAGCGCCGGGCGGTTTGCCGTCACGCGCGCGGTCGGTGCCAAATGCGTCGCGTGGACGCTTTGAC
GTGCCCTTTGTCTGAAGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA m2G966 methyltransferase; rRNA (guanine-N(2)-)-methyltransferase [H]

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MPRSAPSRAQGASSKGGKPHAIRIIGGDWKRTPLPVLDLDGLRPTPDRVRETLFNWLGQNLEGQRCLDLFAGSGALGFEA
ASRGAARVLMVERNARAAGQLRANQERLSARTIEIAEADGLRLAASLAPGSFDVVFLDPPFGTDLLGKALALAAPLVSAN
GFLYVEAGEALELEGNETLAGWEIVRQGKAGAVHFHLLQRENKE

Sequences:

>Translated_204_residues
MPRSAPSRAQGASSKGGKPHAIRIIGGDWKRTPLPVLDLDGLRPTPDRVRETLFNWLGQNLEGQRCLDLFAGSGALGFEA
ASRGAARVLMVERNARAAGQLRANQERLSARTIEIAEADGLRLAASLAPGSFDVVFLDPPFGTDLLGKALALAAPLVSAN
GFLYVEAGEALELEGNETLAGWEIVRQGKAGAVHFHLLQRENKE
>Mature_203_residues
PRSAPSRAQGASSKGGKPHAIRIIGGDWKRTPLPVLDLDGLRPTPDRVRETLFNWLGQNLEGQRCLDLFAGSGALGFEAA
SRGAARVLMVERNARAAGQLRANQERLSARTIEIAEADGLRLAASLAPGSFDVVFLDPPFGTDLLGKALALAAPLVSANG
FLYVEAGEALELEGNETLAGWEIVRQGKAGAVHFHLLQRENKE

Specific function: Specifically methylates the guanosine in position 966 of 16S rRNA in the assembled 30S particle [H]

COG id: COG0742

COG function: function code L; N6-adenine-specific methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmD family [H]

Homologues:

Organism=Escherichia coli, GI1789875, Length=184, Percent_Identity=42.3913043478261, Blast_Score=123, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR004398 [H]

Pfam domain/function: PF03602 Cons_hypoth95 [H]

EC number: =2.1.1.171 [H]

Molecular weight: Translated: 21772; Mature: 21641

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRSAPSRAQGASSKGGKPHAIRIIGGDWKRTPLPVLDLDGLRPTPDRVRETLFNWLGQN
CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCC
LEGQRCLDLFAGSGALGFEAASRGAARVLMVERNARAAGQLRANQERLSARTIEIAEADG
CCCHHHHHHHCCCCCCCHHHCCCCCEEEEEEECCCCCHHHHHCCHHHHHHEEEEEECCCC
LRLAASLAPGSFDVVFLDPPFGTDLLGKALALAAPLVSANGFLYVEAGEALELEGNETLA
EEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCEEH
GWEIVRQGKAGAVHFHLLQRENKE
HHHHHHCCCCCEEEEEEEECCCCC
>Mature Secondary Structure 
PRSAPSRAQGASSKGGKPHAIRIIGGDWKRTPLPVLDLDGLRPTPDRVRETLFNWLGQN
CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCC
LEGQRCLDLFAGSGALGFEAASRGAARVLMVERNARAAGQLRANQERLSARTIEIAEADG
CCCHHHHHHHCCCCCCCHHHCCCCCEEEEEEECCCCCHHHHHCCHHHHHHEEEEEECCCC
LRLAASLAPGSFDVVFLDPPFGTDLLGKALALAAPLVSANGFLYVEAGEALELEGNETLA
EEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCEEH
GWEIVRQGKAGAVHFHLLQRENKE
HHHHHHCCCCCEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]