Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is ybfA [H]

Identifier: 91781689

GI number: 91781689

Start: 338359

End: 339285

Strand: Reverse

Name: ybfA [H]

Synonym: Bxe_A4157

Alternate gene names: 91781689

Gene position: 339285-338359 (Counterclockwise)

Preceding gene: 91781696

Following gene: 91781686

Centisome position: 6.93

GC content: 66.34

Gene sequence:

>927_bases
TTGACCGATTCCGAGGCGCGGCGGCGTGCTCAGGCCGTCCGCCATTTCAACCGCTTCTACGCCCAGCACATTGGCGCACT
CCACGAGCATCTGGCAAAGAGCGCCTTCTCACTCACAGAGGTGCGCGTGCTGCACGAACTCCACCGGGGGCGCGCGCAAA
CCGCCTCGGTGCTCGGGCGCGCCCTCGGTCTCGACAGCGGTTATCTCAGCCGCCTGTTGACCAGTTTCGAACGACGCAAT
CTGATCACGCGCCGCCCGTCCGACACCGACGCGCGCCAATCGCTGATCGCGCTCACGGACAACGGCTACGCCGCCTACGC
GCCGCTCGATACCGCGGCGATCGAAGAAGTGTCGACGCTGCTCGCCGGACTCTCGCCGCTCTCGCAGGATCAGTTGATCG
CTGCGATGAAAGTGATCGAACGGCTACTCGGGACCGAGCCCAGGCACGAACTCGTGACGCTCCGCCAGCCGCGCGCGGGC
GAATGCGGCTGGCTCGTGTATCGGCAGGCGCAGTGGTTCGCCGCGCAATACGGCTGGGATCAGTCGTTTGAAGGATTGCT
CGCGCGAATCGTCGCCGATTACACGCAACGCAACGATCCGCTGCGGGAGATGTGCTGGGTGGCCGAGCAGGAAGGCGTGG
TGGTCGGCTCGGTCTGCATCGTCGGAGTGTCGACGACGGTGGCGGGCGTGCGGCTCCTGTGGGTGGAGCCGGACGTGCAG
CGTTTGGGGATCGGCAGCCAGTTGTTGAGCGAATGCATGCGCTTCGCAAGGCGCGCGGGCTATACCAAGCTCACGCTGAC
AACGGCCACCTCGCTGGAACAACCACGGCGCCTGTGCGAGCGCGCCGGCTTCAGGCTTGCCAGCGCAGCGGCTGAGCGCC
GCTTCGGCCGGGACCTGACGATCGAGCGATGGGAGCTGGATCTGTAG

Upstream 100 bases:

>100_bases
CCACTTCAATCGGGCCCTTGCTGGAGCGGCTTTTGCAAAGGGGGGCGTTCCAATATAGTGCTGGGTAGCAAGCCACAAAA
ATTCCCCCGGGGAGCAGCAT

Downstream 100 bases:

>100_bases
AAAAGCGTCGCGGCTTAAAACGACGGCACCACCGAGCCCTTGAACTGCGTCTTGATGAACTGGCGCACGTCTTCCGACTG
ATACGCGGCAACCAGCTTCC

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MTDSEARRRAQAVRHFNRFYAQHIGALHEHLAKSAFSLTEVRVLHELHRGRAQTASVLGRALGLDSGYLSRLLTSFERRN
LITRRPSDTDARQSLIALTDNGYAAYAPLDTAAIEEVSTLLAGLSPLSQDQLIAAMKVIERLLGTEPRHELVTLRQPRAG
ECGWLVYRQAQWFAAQYGWDQSFEGLLARIVADYTQRNDPLREMCWVAEQEGVVVGSVCIVGVSTTVAGVRLLWVEPDVQ
RLGIGSQLLSECMRFARRAGYTKLTLTTATSLEQPRRLCERAGFRLASAAAERRFGRDLTIERWELDL

Sequences:

>Translated_308_residues
MTDSEARRRAQAVRHFNRFYAQHIGALHEHLAKSAFSLTEVRVLHELHRGRAQTASVLGRALGLDSGYLSRLLTSFERRN
LITRRPSDTDARQSLIALTDNGYAAYAPLDTAAIEEVSTLLAGLSPLSQDQLIAAMKVIERLLGTEPRHELVTLRQPRAG
ECGWLVYRQAQWFAAQYGWDQSFEGLLARIVADYTQRNDPLREMCWVAEQEGVVVGSVCIVGVSTTVAGVRLLWVEPDVQ
RLGIGSQLLSECMRFARRAGYTKLTLTTATSLEQPRRLCERAGFRLASAAAERRFGRDLTIERWELDL
>Mature_307_residues
TDSEARRRAQAVRHFNRFYAQHIGALHEHLAKSAFSLTEVRVLHELHRGRAQTASVLGRALGLDSGYLSRLLTSFERRNL
ITRRPSDTDARQSLIALTDNGYAAYAPLDTAAIEEVSTLLAGLSPLSQDQLIAAMKVIERLLGTEPRHELVTLRQPRAGE
CGWLVYRQAQWFAAQYGWDQSFEGLLARIVADYTQRNDPLREMCWVAEQEGVVVGSVCIVGVSTTVAGVRLLWVEPDVQR
LGIGSQLLSECMRFARRAGYTKLTLTTATSLEQPRRLCERAGFRLASAAAERRFGRDLTIERWELDL

Specific function: Putative DNA-binding acetyltransferase (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181
- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00583 Acetyltransf_1; PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 34581; Mature: 34450

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDSEARRRAQAVRHFNRFYAQHIGALHEHLAKSAFSLTEVRVLHELHRGRAQTASVLGR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
ALGLDSGYLSRLLTSFERRNLITRRPSDTDARQSLIALTDNGYAAYAPLDTAAIEEVSTL
HHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHEEEEECCCEEEECCCCHHHHHHHHHH
LAGLSPLSQDQLIAAMKVIERLLGTEPRHELVTLRQPRAGECGWLVYRQAQWFAAQYGWD
HHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEECCCCCCCCHHHHHHHHHHHHHHCCCC
QSFEGLLARIVADYTQRNDPLREMCWVAEQEGVVVGSVCIVGVSTTVAGVRLLWVEPDVQ
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCEEEEEECCCHH
RLGIGSQLLSECMRFARRAGYTKLTLTTATSLEQPRRLCERAGFRLASAAAERRFGRDLT
HHCCCHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC
IERWELDL
EEECCCCC
>Mature Secondary Structure 
TDSEARRRAQAVRHFNRFYAQHIGALHEHLAKSAFSLTEVRVLHELHRGRAQTASVLGR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
ALGLDSGYLSRLLTSFERRNLITRRPSDTDARQSLIALTDNGYAAYAPLDTAAIEEVSTL
HHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHEEEEECCCEEEECCCCHHHHHHHHHH
LAGLSPLSQDQLIAAMKVIERLLGTEPRHELVTLRQPRAGECGWLVYRQAQWFAAQYGWD
HHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEECCCCCCCCHHHHHHHHHHHHHHCCCC
QSFEGLLARIVADYTQRNDPLREMCWVAEQEGVVVGSVCIVGVSTTVAGVRLLWVEPDVQ
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCEEEEEECCCHH
RLGIGSQLLSECMRFARRAGYTKLTLTTATSLEQPRRLCERAGFRLASAAAERRFGRDLT
HHCCCHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC
IERWELDL
EEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]