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The map label for this gene is 91781685

Identifier: 91781685

GI number: 91781685

Start: 334198

End: 334815

Strand: Direct

Name: 91781685

Synonym: Bxe_A4161

Alternate gene names: NA

Gene position: 334198-334815 (Clockwise)

Preceding gene: 91781684

Following gene: 91781687

Centisome position: 6.83

GC content: 63.43

Gene sequence:

>618_bases
ATGCTCAAAAACCGCTTCGCGCGTACGGCGCGTGCTGCCGTGATAGCCTGCGCGCTCGGCGGCGCCTTGCTGGTGGCGGG
CTGCGGCAAGCAGCCGCCGGCGTTCCAGAATCTCGACATCACCGGCAATACGCAATTCGCGAGCAACTTCTCGTTGCCCG
ACACGTCCGGTCACATCCGCACAATGGCGGACTACAAAGGCAAGGTGGTGGTGCTGTTCTTCGGCTACACGCATTGCCCG
GATGTTTGTCCGACCACGATGGCCGAGCTCTCGCAGGCGTTGCAGCAACTCGGCCCGGAAGACGCGAAGCGCGTGCAGGT
GCTGTTCGTCACCGTCGATCCCGAGCGTGATACGCCGGCCTTGCTCGCGCAATACGTGCCGGCGTTCAACCCGACGTTCG
TCGGCTTGCGGCCGGCCGATCAGGCGCAACTCACCAGGATCACGAAAGACTTCCGCGTCTACTACGCGAAGGTGCCGGGC
AAGACACCTGACAGCTACACAATGGACCACACGGCAGCGAGCTACGTGTTCGACACGGACGGCAAGCTGCGTCTGTTCGC
CCGTGACGGCCAGGGCGCAACGCCGTGGGTTCACGATATCAAGCTGCTGCTCGACTGA

Upstream 100 bases:

>100_bases
GCGCGCAAGACTTTCCGTTATTCGATCGTCTATCTCTCGCTGCTGTTTGCGGCGCTGCTGATCGACCACTATGCGCGCGT
CCTGATCGGCGCGTAATACC

Downstream 100 bases:

>100_bases
CGCACCGACCCGTGCGGGCCGTGTCACATCACGCGCCCGCTTTCAACGCCCCTCGCTTTACCACGCTCAAGCCGGAATCG
GCAGATTCAATCCCGCCGCA

Product: electron transport protein SCO1/SenC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MLKNRFARTARAAVIACALGGALLVAGCGKQPPAFQNLDITGNTQFASNFSLPDTSGHIRTMADYKGKVVVLFFGYTHCP
DVCPTTMAELSQALQQLGPEDAKRVQVLFVTVDPERDTPALLAQYVPAFNPTFVGLRPADQAQLTRITKDFRVYYAKVPG
KTPDSYTMDHTAASYVFDTDGKLRLFARDGQGATPWVHDIKLLLD

Sequences:

>Translated_205_residues
MLKNRFARTARAAVIACALGGALLVAGCGKQPPAFQNLDITGNTQFASNFSLPDTSGHIRTMADYKGKVVVLFFGYTHCP
DVCPTTMAELSQALQQLGPEDAKRVQVLFVTVDPERDTPALLAQYVPAFNPTFVGLRPADQAQLTRITKDFRVYYAKVPG
KTPDSYTMDHTAASYVFDTDGKLRLFARDGQGATPWVHDIKLLLD
>Mature_205_residues
MLKNRFARTARAAVIACALGGALLVAGCGKQPPAFQNLDITGNTQFASNFSLPDTSGHIRTMADYKGKVVVLFFGYTHCP
DVCPTTMAELSQALQQLGPEDAKRVQVLFVTVDPERDTPALLAQYVPAFNPTFVGLRPADQAQLTRITKDFRVYYAKVPG
KTPDSYTMDHTAASYVFDTDGKLRLFARDGQGATPWVHDIKLLLD

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SCO1/2 family [H]

Homologues:

Organism=Homo sapiens, GI281182727, Length=134, Percent_Identity=39.5522388059701, Blast_Score=109, Evalue=1e-24,
Organism=Homo sapiens, GI281182722, Length=134, Percent_Identity=39.5522388059701, Blast_Score=109, Evalue=1e-24,
Organism=Homo sapiens, GI281182716, Length=134, Percent_Identity=39.5522388059701, Blast_Score=109, Evalue=1e-24,
Organism=Homo sapiens, GI153791313, Length=134, Percent_Identity=39.5522388059701, Blast_Score=109, Evalue=1e-24,
Organism=Homo sapiens, GI4759068, Length=181, Percent_Identity=30.939226519337, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17531419, Length=145, Percent_Identity=28.9655172413793, Blast_Score=93, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6319498, Length=143, Percent_Identity=32.8671328671329, Blast_Score=101, Evalue=8e-23,
Organism=Saccharomyces cerevisiae, GI6319511, Length=143, Percent_Identity=32.1678321678322, Blast_Score=93, Evalue=4e-20,
Organism=Drosophila melanogaster, GI19920710, Length=143, Percent_Identity=33.5664335664336, Blast_Score=109, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003782
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF02630 SCO1-SenC [H]

EC number: NA

Molecular weight: Translated: 22429; Mature: 22429

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNRFARTARAAVIACALGGALLVAGCGKQPPAFQNLDITGNTQFASNFSLPDTSGHIR
CCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCEE
TMADYKGKVVVLFFGYTHCPDVCPTTMAELSQALQQLGPEDAKRVQVLFVTVDPERDTPA
EEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCHH
LLAQYVPAFNPTFVGLRPADQAQLTRITKDFRVYYAKVPGKTPDSYTMDHTAASYVFDTD
HHHHHCCCCCCEEEECCCCCHHHHHHHHHEEEEEEEECCCCCCCCCEECCCCEEEEEECC
GKLRLFARDGQGATPWVHDIKLLLD
CCEEEEEECCCCCCCHHHHEEEECC
>Mature Secondary Structure
MLKNRFARTARAAVIACALGGALLVAGCGKQPPAFQNLDITGNTQFASNFSLPDTSGHIR
CCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCEE
TMADYKGKVVVLFFGYTHCPDVCPTTMAELSQALQQLGPEDAKRVQVLFVTVDPERDTPA
EEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCHH
LLAQYVPAFNPTFVGLRPADQAQLTRITKDFRVYYAKVPGKTPDSYTMDHTAASYVFDTD
HHHHHCCCCCCEEEECCCCCHHHHHHHHHEEEEEEEECCCCCCCCCEECCCCEEEEEECC
GKLRLFARDGQGATPWVHDIKLLLD
CCEEEEEECCCCCCCHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA