| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91781545
Identifier: 91781545
GI number: 91781545
Start: 188514
End: 189086
Strand: Direct
Name: 91781545
Synonym: Bxe_A4300
Alternate gene names: NA
Gene position: 188514-189086 (Clockwise)
Preceding gene: 91781543
Following gene: 91781546
Centisome position: 3.85
GC content: 63.53
Gene sequence:
>573_bases ATGGCCCGTCCCAAGAGCGAAGACAAACGTAATGCCATTCTTGCTGCTGCGGCGCAGGTCATCGCCGAGCAGGGGCTGGG CGCGCCCACCTCGCGCATCGCCAGGGTGGCGGGTGTGGCGGAAGGAACGCTGTTTACGTACTTCGACAATAAAGACGATC TGCTGAACGTCCTGTATCTCGACATCAAGGGCGAACTGCGGGAGGTAATGATGACGGCTTATCCCAGGCGCGCAGGCGTG CGCGAGCGCGTGCAACACGTGTGGAACCGCTTTGTCGACTGGGGCGTCGCGCAACCGCACAAGCGCCGCGCTATGGCGCA GCTCGCCGTGTCGGAACGCCTGACCGACCATACGCGCTCGGCAGGCATGCAGTCGTTCGCCGACATCAACGCGATGATTC AGGCGAGCGTCGCGAGCGGCGCATTGCGGGATCATCCGCCGGCATTCCTGTCGGCGATCATGGGCGCTCTGGCGGAAACG ACCATGGACTTCATCGCTCGGGAACCGGCTAACGCCGAGCGCTACCGCCAGGCGGGTTTCGACGCGTTCTGGAATGCGAT CGCGCGTCATTAA
Upstream 100 bases:
>100_bases TAGCGCGGCGCGAACGTGTACATAAACGCTTGAACGCAGTTTTGTTTGTGGCTATGATTGAGCAATCACTCATTTATGGT TCGAGATCGAACCGATCTGC
Downstream 100 bases:
>100_bases TTTTTTTGTCACGTTAATGAGTGATTACTTGCTCAACTAAACTGAAGGAGTGAACGATGGCTAAGGTCTGGCTGGTTACC GGCAGCGCCCGCGGACTCGG
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; Regulatory Protein; Regulatory Protein TetR; Transcriptional Regulator Tetr Family; TetR Family Transcriptional Regulator Member; TetR-Family Transcriptional Regulator; Transcriptional Regulator TetR
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MARPKSEDKRNAILAAAAQVIAEQGLGAPTSRIARVAGVAEGTLFTYFDNKDDLLNVLYLDIKGELREVMMTAYPRRAGV RERVQHVWNRFVDWGVAQPHKRRAMAQLAVSERLTDHTRSAGMQSFADINAMIQASVASGALRDHPPAFLSAIMGALAET TMDFIAREPANAERYRQAGFDAFWNAIARH
Sequences:
>Translated_190_residues MARPKSEDKRNAILAAAAQVIAEQGLGAPTSRIARVAGVAEGTLFTYFDNKDDLLNVLYLDIKGELREVMMTAYPRRAGV RERVQHVWNRFVDWGVAQPHKRRAMAQLAVSERLTDHTRSAGMQSFADINAMIQASVASGALRDHPPAFLSAIMGALAET TMDFIAREPANAERYRQAGFDAFWNAIARH >Mature_189_residues ARPKSEDKRNAILAAAAQVIAEQGLGAPTSRIARVAGVAEGTLFTYFDNKDDLLNVLYLDIKGELREVMMTAYPRRAGVR ERVQHVWNRFVDWGVAQPHKRRAMAQLAVSERLTDHTRSAGMQSFADINAMIQASVASGALRDHPPAFLSAIMGALAETT MDFIAREPANAERYRQAGFDAFWNAIARH
Specific function: Unknown
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21040; Mature: 20909
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPKSEDKRNAILAAAAQVIAEQGLGAPTSRIARVAGVAEGTLFTYFDNKDDLLNVLYL CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHH DIKGELREVMMTAYPRRAGVRERVQHVWNRFVDWGVAQPHKRRAMAQLAVSERLTDHTRS HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH AGMQSFADINAMIQASVASGALRDHPPAFLSAIMGALAETTMDFIAREPANAERYRQAGF HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCH DAFWNAIARH HHHHHHHHCC >Mature Secondary Structure ARPKSEDKRNAILAAAAQVIAEQGLGAPTSRIARVAGVAEGTLFTYFDNKDDLLNVLYL CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHH DIKGELREVMMTAYPRRAGVRERVQHVWNRFVDWGVAQPHKRRAMAQLAVSERLTDHTRS HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH AGMQSFADINAMIQASVASGALRDHPPAFLSAIMGALAETTMDFIAREPANAERYRQAGF HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCH DAFWNAIARH HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA