| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is 91781523
Identifier: 91781523
GI number: 91781523
Start: 167182
End: 167835
Strand: Direct
Name: 91781523
Synonym: Bxe_A4323
Alternate gene names: NA
Gene position: 167182-167835 (Clockwise)
Preceding gene: 91781520
Following gene: 91781525
Centisome position: 3.41
GC content: 63.91
Gene sequence:
>654_bases TTGAACATTCCCGCTCACGCCCCGCTGCATCTGCTGCACACGGCCGCCGTCGGCACGCTCGCCACTCACGCTCGGCAGCC GGAAGGCTTTCCTTATCCGTCCGTGCTGCCGTTTGCACCGGACCCGCAGCATCGTCCGACGATCCTGGTGAGCCGGCTCG CCGAGCATACCCATAACCTGCACGCCGACCCGCGCGCCGGTTTTCTGGCAGTCGACGCCCCCGACGGCGACGTGCTGAGC GGCCAGCGCGTCACGCTGCTCGGCACCTTCGAACCGATCGACCCGACGCCCGAGGTCGTGCAACGCTATCTGCGCTACCA CCCGGACGCGGAGCGCTATCTGGTGCTCGGCGACTTCACGTTCTGGGCGATGCGGCTCGAACGGCTGCGCTATATCGGCG GTTTCGGCGCAATGGGATGGCTGGATGGCGCGGAACTCGATCTATTGCCGCCACTCGCTTTCGATGAAGAGAACGCACTC ATCGCCCAATTCGCCGGCCATGCCGAAGGAATTCACCTACTGGGCGCCGACCGATATGGCGCGGATCTGAAAGTGAACGG AGTGCGAAGCCGTTTTGTCTTCGACGACGCGAAACTCAATATCGGGAACCTGCGCGCGGCGCTCGAAGATTGCATGCAGC GCTACGCTAATTAG
Upstream 100 bases:
>100_bases TCGGCTCAGCTCAGCTCGGCTCAGCTTGACCGGACTGGCCTCGCGCGGCGTGCTTGCCGCTTTTCTATGATTCGCCGCAG ATCTGTGAAGGAGCACACAC
Downstream 100 bases:
>100_bases CGCTTTTAGCGCTGTTTTGGGGAAAACGCTCATGCGTAATAACGCGACAAACGCCCGTAGCAATAAGCTACGACCGTTCA GATGCAAGCTTTCATGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: Heme Iron Utilization Protein; Pyridoxamine 5-Phosphate Oxidase-Like Protein; Pyridoxamine 5prime-Phosphate Oxidase-Related Protein; Pyridoxamine Oxidase Protein; FMN Flavoprotein; Pyridoxamine 5-Phosphate Oxidase
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MNIPAHAPLHLLHTAAVGTLATHARQPEGFPYPSVLPFAPDPQHRPTILVSRLAEHTHNLHADPRAGFLAVDAPDGDVLS GQRVTLLGTFEPIDPTPEVVQRYLRYHPDAERYLVLGDFTFWAMRLERLRYIGGFGAMGWLDGAELDLLPPLAFDEENAL IAQFAGHAEGIHLLGADRYGADLKVNGVRSRFVFDDAKLNIGNLRAALEDCMQRYAN
Sequences:
>Translated_217_residues MNIPAHAPLHLLHTAAVGTLATHARQPEGFPYPSVLPFAPDPQHRPTILVSRLAEHTHNLHADPRAGFLAVDAPDGDVLS GQRVTLLGTFEPIDPTPEVVQRYLRYHPDAERYLVLGDFTFWAMRLERLRYIGGFGAMGWLDGAELDLLPPLAFDEENAL IAQFAGHAEGIHLLGADRYGADLKVNGVRSRFVFDDAKLNIGNLRAALEDCMQRYAN >Mature_217_residues MNIPAHAPLHLLHTAAVGTLATHARQPEGFPYPSVLPFAPDPQHRPTILVSRLAEHTHNLHADPRAGFLAVDAPDGDVLS GQRVTLLGTFEPIDPTPEVVQRYLRYHPDAERYLVLGDFTFWAMRLERLRYIGGFGAMGWLDGAELDLLPPLAFDEENAL IAQFAGHAEGIHLLGADRYGADLKVNGVRSRFVFDDAKLNIGNLRAALEDCMQRYAN
Specific function: Unknown
COG id: COG0748
COG function: function code P; Putative heme iron utilization protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23992; Mature: 23992
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIPAHAPLHLLHTAAVGTLATHARQPEGFPYPSVLPFAPDPQHRPTILVSRLAEHTHNL CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC HADPRAGFLAVDAPDGDVLSGQRVTLLGTFEPIDPTPEVVQRYLRYHPDAERYLVLGDFT CCCCCCCEEEEECCCCCEECCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECHH FWAMRLERLRYIGGFGAMGWLDGAELDLLPPLAFDEENALIAQFAGHAEGIHLLGADRYG HHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCEEEECCCCCCCEEEEECCCCC ADLKVNGVRSRFVFDDAKLNIGNLRAALEDCMQRYAN CCEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNIPAHAPLHLLHTAAVGTLATHARQPEGFPYPSVLPFAPDPQHRPTILVSRLAEHTHNL CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC HADPRAGFLAVDAPDGDVLSGQRVTLLGTFEPIDPTPEVVQRYLRYHPDAERYLVLGDFT CCCCCCCEEEEECCCCCEECCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECHH FWAMRLERLRYIGGFGAMGWLDGAELDLLPPLAFDEENALIAQFAGHAEGIHLLGADRYG HHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCEEEECCCCCCCEEEEECCCCC ADLKVNGVRSRFVFDDAKLNIGNLRAALEDCMQRYAN CCEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA