| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91781520
Identifier: 91781520
GI number: 91781520
Start: 162732
End: 163748
Strand: Direct
Name: 91781520
Synonym: Bxe_A4326
Alternate gene names: NA
Gene position: 162732-163748 (Clockwise)
Preceding gene: 91781519
Following gene: 91781523
Centisome position: 3.32
GC content: 57.82
Gene sequence:
>1017_bases GTGACCACTGTGACCCGTTCGTTCGACGACGCATGGCGCCGCTGGATTGCCGAGAATCTGCTGCTCGACGCACCGCCCTC CGCGCTGCATGGCGCACTGCTCGGCCACGGTTTCGATGCGGCCGATGTCACGCGAGAAATCGAAGCGGCGCTCGCGAGTC CTTATTTTCACGGCGCTGCGCGCTTGCGCAATCGTTTGCGTAAGCGTGAATGGATTTTGTCGGTGTATAGCGAACTGAAT CGCATGCGCGCGGCGAGCGGTGTGATCGAACGGTGCGAACGCTTATCGCGCGATGCGTTCTTTGAGCAGTATTACTTTCA GAACCGGCCAGTCATTATCACCGGCGCATTCGATTTCTGGCCTGCGTGTTCGCGTTGGAATTGGGACTATCTTCGCCGGC AGTGCGGCGATTGCGAAGTGGAAGTGCAGTTCGGCCGCGAGTCGGATGCGAATTACGAAATCAATCAACCCAGGCTCACG CGCATGATGCGCTTTGCCGATTATGTCGATCTAGTCGAGCAGCGCGGCCCGACAAACGATTTCTATATGACCGCCAATAA CACCTCGCGCAATCGCGCGGCGCTCGCGGCGTTATGGTCCGATGTGCCGCCAATCGACGCCTATCTGGATGCCGCGTCGC CCGACACCGGTTTCTTCTGGATGGGACCGGCCGGAACAAAGACGCCGTTTCACCATGACCTGACCAACAATTTCATGGCG CAGGTGATCGGCCGCAAACACATCAAACTCGTGCCGCTGTCCGATACGCCGTATATGGCGAACCACCTGCATTGCTATTC GCGAGTGGACGGCGGTGCGATCGACTTCGACAGTTTCCCGTCGATGCGGCAGGCGCAATTGATCGAGTGCACGCTCGCGC CAGGCGAACTGCTGTTTCTGCCTGTCGGCTGGTGGCATTACGTGGAAGGAATTGACGCATCGGTGACGATGACGTTTACC AATTTTCTTCGCAGCAACGATTTCTCGCGTCGCTACGATACGTATCACGAACTATGA
Upstream 100 bases:
>100_bases TGGTCAGGAAGGCACGCGCGCCGCGAGGTTCGCGTGCCTTTTTCTTTGCCGATTCGTTTTGTGAATCTTTCTTGCCGATC CGCATTGTTCGGAGAATGCC
Downstream 100 bases:
>100_bases CGTGCGGTTGAATGGAGCGCCGCGCTGAAGCGTCGCGGTCGGAATGCGATGCTGGAGGTGAGAAGCGTCGTGAATCGGCT AGAAGTGGCGCAAAGCGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: Transcription Factor Jumonji; JmjC Domain-Containing Protein; Transcription Factor Jumonji Domain-Containing Protein; Transcription Factor Jumonji Jmjc DomaiN-Containing Protein; JmjC Domain Protein; Amidohydrolase; Transcription Factor Jumonji JmjC; JmjC-Domain Protein; JmjC Domain-Containing; Transcription Factor Jumonji JmjC Protein; Peptide-Aspartate Beta-Dioxygenase
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MTTVTRSFDDAWRRWIAENLLLDAPPSALHGALLGHGFDAADVTREIEAALASPYFHGAARLRNRLRKREWILSVYSELN RMRAASGVIERCERLSRDAFFEQYYFQNRPVIITGAFDFWPACSRWNWDYLRRQCGDCEVEVQFGRESDANYEINQPRLT RMMRFADYVDLVEQRGPTNDFYMTANNTSRNRAALAALWSDVPPIDAYLDAASPDTGFFWMGPAGTKTPFHHDLTNNFMA QVIGRKHIKLVPLSDTPYMANHLHCYSRVDGGAIDFDSFPSMRQAQLIECTLAPGELLFLPVGWWHYVEGIDASVTMTFT NFLRSNDFSRRYDTYHEL
Sequences:
>Translated_338_residues MTTVTRSFDDAWRRWIAENLLLDAPPSALHGALLGHGFDAADVTREIEAALASPYFHGAARLRNRLRKREWILSVYSELN RMRAASGVIERCERLSRDAFFEQYYFQNRPVIITGAFDFWPACSRWNWDYLRRQCGDCEVEVQFGRESDANYEINQPRLT RMMRFADYVDLVEQRGPTNDFYMTANNTSRNRAALAALWSDVPPIDAYLDAASPDTGFFWMGPAGTKTPFHHDLTNNFMA QVIGRKHIKLVPLSDTPYMANHLHCYSRVDGGAIDFDSFPSMRQAQLIECTLAPGELLFLPVGWWHYVEGIDASVTMTFT NFLRSNDFSRRYDTYHEL >Mature_337_residues TTVTRSFDDAWRRWIAENLLLDAPPSALHGALLGHGFDAADVTREIEAALASPYFHGAARLRNRLRKREWILSVYSELNR MRAASGVIERCERLSRDAFFEQYYFQNRPVIITGAFDFWPACSRWNWDYLRRQCGDCEVEVQFGRESDANYEINQPRLTR MMRFADYVDLVEQRGPTNDFYMTANNTSRNRAALAALWSDVPPIDAYLDAASPDTGFFWMGPAGTKTPFHHDLTNNFMAQ VIGRKHIKLVPLSDTPYMANHLHCYSRVDGGAIDFDSFPSMRQAQLIECTLAPGELLFLPVGWWHYVEGIDASVTMTFTN FLRSNDFSRRYDTYHEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI223942014, Length=237, Percent_Identity=30.379746835443, Blast_Score=122, Evalue=6e-28, Organism=Homo sapiens, GI223942018, Length=238, Percent_Identity=30.2521008403361, Blast_Score=121, Evalue=9e-28, Organism=Homo sapiens, GI167860114, Length=273, Percent_Identity=25.6410256410256, Blast_Score=92, Evalue=8e-19, Organism=Homo sapiens, GI148596936, Length=269, Percent_Identity=26.3940520446097, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI21314714, Length=242, Percent_Identity=26.8595041322314, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI89242134, Length=233, Percent_Identity=23.6051502145923, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI4826914, Length=201, Percent_Identity=25.8706467661692, Blast_Score=66, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17557716, Length=256, Percent_Identity=24.21875, Blast_Score=78, Evalue=7e-15, Organism=Drosophila melanogaster, GI281365404, Length=245, Percent_Identity=25.7142857142857, Blast_Score=92, Evalue=7e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38972; Mature: 38841
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVTRSFDDAWRRWIAENLLLDAPPSALHGALLGHGFDAADVTREIEAALASPYFHGAA CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHH RLRNRLRKREWILSVYSELNRMRAASGVIERCERLSRDAFFEQYYFQNRPVIITGAFDFW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHC PACSRWNWDYLRRQCGDCEVEVQFGRESDANYEINQPRLTRMMRFADYVDLVEQRGPTND CCCCCCCHHHHHHHCCCCEEEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCC FYMTANNTSRNRAALAALWSDVPPIDAYLDAASPDTGFFWMGPAGTKTPFHHDLTNNFMA EEEEECCCCCHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEECCCCCCCCCCHHHHHHHHH QVIGRKHIKLVPLSDTPYMANHLHCYSRVDGGAIDFDSFPSMRQAQLIECTLAPGELLFL HHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCEECCCCCCCCCHHHEEEEEECCCCEEEE PVGWWHYVEGIDASVTMTFTNFLRSNDFSRRYDTYHEL ECCHHHHHCCCCCEEEHHHHHHHHCCCCHHHHHHHHCC >Mature Secondary Structure TTVTRSFDDAWRRWIAENLLLDAPPSALHGALLGHGFDAADVTREIEAALASPYFHGAA CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHH RLRNRLRKREWILSVYSELNRMRAASGVIERCERLSRDAFFEQYYFQNRPVIITGAFDFW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHC PACSRWNWDYLRRQCGDCEVEVQFGRESDANYEINQPRLTRMMRFADYVDLVEQRGPTND CCCCCCCHHHHHHHCCCCEEEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCC FYMTANNTSRNRAALAALWSDVPPIDAYLDAASPDTGFFWMGPAGTKTPFHHDLTNNFMA EEEEECCCCCHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEECCCCCCCCCCHHHHHHHHH QVIGRKHIKLVPLSDTPYMANHLHCYSRVDGGAIDFDSFPSMRQAQLIECTLAPGELLFL HHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCEECCCCCCCCCHHHEEEEEECCCCEEEE PVGWWHYVEGIDASVTMTFTNFLRSNDFSRRYDTYHEL ECCHHHHHCCCCCEEEHHHHHHHHCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA