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The map label for this gene is xerC [H]

Identifier: 91781471

GI number: 91781471

Start: 104965

End: 105888

Strand: Reverse

Name: xerC [H]

Synonym: Bxe_A4375

Alternate gene names: 91781471

Gene position: 105888-104965 (Counterclockwise)

Preceding gene: 91781472

Following gene: 91781470

Centisome position: 2.16

GC content: 68.18

Gene sequence:

>924_bases
GTGACCGCCGCCGACCCGATCGCCGCCTATCTGTCGAATCTCGAACACGAGCGGCGGCTCTCGGCGCATACGCTGCGCGG
CTACACCCACGAACTGGAAGAACTCAAGCTGCTGGCCAAAGGCCGGCCGCTCGAAAGCCTGAGCGCCGTGGACATTCGCG
GCGCCGTTTCACGGGCGCACGCAGGCGGCCTGACGGCGCGCTCGATCAGCCACCGCCTCTCGGCATGGCGCGCGTTTTAT
CGCTGGCTCGCCGGCCGCGTCGATCTGCCGGCCAATCCGGTCGCGACCGTGCGCGCGCCGAAGCAGCCCAAAACGCTGCC
CAAAGCACTTTCCGTCGACGACGCCACGCGTCTGATGGAGAGCCCGCCCGCTGCATCGCCCGAAGGTTTGCGCGATCACG
CCATGCTCGAACTGTTTTACTCGTCGGGCCTGCGTCTCGCGGAACTGGTCGGCCTCGACGCCCGTTTCGCCGATGCCGAT
GGCTACCGCTCCGCCGGCTGGATCAAGCTCGACTCGGCTGAAGTCGAAGTGCTCGGCAAAGGCAACCGGCGCCGCGTCGT
GCCGGTCGGCAGCAAGGCGCTGGAAGCCTTGGCCGCCTGGCTCGCGGTCCGCGACCAGATGGTGAAGCACGATCCGCATC
CGCTGTTCCTGTCGGCGCGCGGCAATCGCCTGTCACCGAACGTGGTGCGCGAGCGCGTAAAGCGCGCGGCGCTGGTCGCC
GGCATTCCCGCCAACGTGCATCCGCACGTGCTGCGGCATTCGTTCGCCACGCACGTGCTGCAGTCGAGCGGCGATCTGCG
CGCGGTGCAGGAGCTGCTCGGCCACGCCAGCATCACCGCCACGCAGGTCTACACCGCGCTCGATTTCCAGCATCTCGCGC
ACGTCTACGATCAGGCGCATCCGCGCGCCAAGAAACGCGACTGA

Upstream 100 bases:

>100_bases
TCCTCACCCAGATCGGCGCGCTGGCAAGCGCCGCGCTGAGCCGTCTGCTGCCGCGCTAAGCGGCGCTCCACTCAGCGCCA
GCCGCTCAAAAAAGCCCACC

Downstream 100 bases:

>100_bases
CGCCGCGACGCGAGTCGCGGCGTACGGTCTCCGCCTTCGCTTTACCTGCCGCGCGCGCCGAGCCGCGCGGCCCATTGCTC
ACTCTGACCACCCTGATGAA

Product: site-specific tyrosine recombinase XerC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MTAADPIAAYLSNLEHERRLSAHTLRGYTHELEELKLLAKGRPLESLSAVDIRGAVSRAHAGGLTARSISHRLSAWRAFY
RWLAGRVDLPANPVATVRAPKQPKTLPKALSVDDATRLMESPPAASPEGLRDHAMLELFYSSGLRLAELVGLDARFADAD
GYRSAGWIKLDSAEVEVLGKGNRRRVVPVGSKALEALAAWLAVRDQMVKHDPHPLFLSARGNRLSPNVVRERVKRAALVA
GIPANVHPHVLRHSFATHVLQSSGDLRAVQELLGHASITATQVYTALDFQHLAHVYDQAHPRAKKRD

Sequences:

>Translated_307_residues
MTAADPIAAYLSNLEHERRLSAHTLRGYTHELEELKLLAKGRPLESLSAVDIRGAVSRAHAGGLTARSISHRLSAWRAFY
RWLAGRVDLPANPVATVRAPKQPKTLPKALSVDDATRLMESPPAASPEGLRDHAMLELFYSSGLRLAELVGLDARFADAD
GYRSAGWIKLDSAEVEVLGKGNRRRVVPVGSKALEALAAWLAVRDQMVKHDPHPLFLSARGNRLSPNVVRERVKRAALVA
GIPANVHPHVLRHSFATHVLQSSGDLRAVQELLGHASITATQVYTALDFQHLAHVYDQAHPRAKKRD
>Mature_306_residues
TAADPIAAYLSNLEHERRLSAHTLRGYTHELEELKLLAKGRPLESLSAVDIRGAVSRAHAGGLTARSISHRLSAWRAFYR
WLAGRVDLPANPVATVRAPKQPKTLPKALSVDDATRLMESPPAASPEGLRDHAMLELFYSSGLRLAELVGLDARFADADG
YRSAGWIKLDSAEVEVLGKGNRRRVVPVGSKALEALAAWLAVRDQMVKHDPHPLFLSARGNRLSPNVVRERVKRAALVAG
IPANVHPHVLRHSFATHVLQSSGDLRAVQELLGHASITATQVYTALDFQHLAHVYDQAHPRAKKRD

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: COG4973

COG function: function code L; Site-specific recombinase XerC

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790244, Length=302, Percent_Identity=46.3576158940397, Blast_Score=247, Evalue=7e-67,
Organism=Escherichia coli, GI1789261, Length=302, Percent_Identity=35.7615894039735, Blast_Score=160, Evalue=7e-41,
Organism=Escherichia coli, GI1790767, Length=178, Percent_Identity=28.6516853932584, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1790768, Length=182, Percent_Identity=28.021978021978, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109
- InterPro:   IPR004107
- InterPro:   IPR011931 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 33651; Mature: 33520

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAADPIAAYLSNLEHERRLSAHTLRGYTHELEELKLLAKGRPLESLSAVDIRGAVSRAH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
AGGLTARSISHRLSAWRAFYRWLAGRVDLPANPVATVRAPKQPKTLPKALSVDDATRLME
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCHHHCCHHHHHHHHC
SPPAASPEGLRDHAMLELFYSSGLRLAELVGLDARFADADGYRSAGWIKLDSAEVEVLGK
CCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCEECCCCCCCCCCEEEECCCCEEEECC
GNRRRVVPVGSKALEALAAWLAVRDQMVKHDPHPLFLSARGNRLSPNVVRERVKRAALVA
CCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHH
GIPANVHPHVLRHSFATHVLQSSGDLRAVQELLGHASITATQVYTALDFQHLAHVYDQAH
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
PRAKKRD
CCCCCCC
>Mature Secondary Structure 
TAADPIAAYLSNLEHERRLSAHTLRGYTHELEELKLLAKGRPLESLSAVDIRGAVSRAH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
AGGLTARSISHRLSAWRAFYRWLAGRVDLPANPVATVRAPKQPKTLPKALSVDDATRLME
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCHHHCCHHHHHHHHC
SPPAASPEGLRDHAMLELFYSSGLRLAELVGLDARFADADGYRSAGWIKLDSAEVEVLGK
CCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCEECCCCCCCCCCEEEECCCCEEEECC
GNRRRVVPVGSKALEALAAWLAVRDQMVKHDPHPLFLSARGNRLSPNVVRERVKRAALVA
CCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHH
GIPANVHPHVLRHSFATHVLQSSGDLRAVQELLGHASITATQVYTALDFQHLAHVYDQAH
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
PRAKKRD
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA