| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is pckG [H]
Identifier: 91781424
GI number: 91781424
Start: 53941
End: 55797
Strand: Direct
Name: pckG [H]
Synonym: Bxe_A4422
Alternate gene names: 91781424
Gene position: 53941-55797 (Clockwise)
Preceding gene: 91781422
Following gene: 91781426
Centisome position: 1.1
GC content: 64.4
Gene sequence:
>1857_bases ATGAACCATCCCTCATTCGAAGGGCAGCCCACTATCGAGGCGCCCGCGTGGGTCAAAAACCGAAAACTGGTCGACTGGGT GCAGCGCGTCGCCGCCATGACCAAGCCGGACAGAATCGTCTGGTGCGACGGCTCACAGGAGGAATACGACCGGCTTTGCG CGCAGATGGTCGAGGCGGGCACCCTCAAAAAACTCAACCCCGCGAAGCGTCCCAACTCCTATCTGGCATGGTCTGACCCG TCCGACGTGGCGCGCGTCGAAGATCGCACCTTCATCTGTTCGCAGCAGCGAGAGGACGCGGGCCCCACCAACAACTGGGT CGCCCCGGCCGAGATGCGCTCGACGCTCGGCGGCCTGTTCGAAGGCGCCATGCGCGGCCGCACCATGTATGTGGTGCCGT TTTCGATGGGGCCACTCGGTTCGCCGATTGCGCACATCGGCGTGGAACTGAGCGACAGCCCGTACGTGGTCACCAACATG CGCATCATGACGCGCATGGGCCGCAAGGTGTACGACGTGCTGGGCGAAGACGGCGAGTTCGTGCCGTGCGTCCACTCCGT GGGCGCACCGCTCGCGGCGGGCGAAAAAGACGTGCCGTGGCCGTGCAACGCAACCAAATACATCGTCCACTTTCCGGAAT CGCGCGAAATCTGGAGCTATGGCTCGGGCTACGGCGGCAATGCGCTACTCGGCAAGAAGTGTTTCGCGCTGCGCATCGCC TCGACTATGGGCCGCGACGAAGGCTGGCTGGCCGAGCACATGCTGATTCTCGGCGTGACCTCGCCGGAAGGCCGCAAGCA TCATGTGGCGGCGGCGTTTCCGTCGGCGTGCGGCAAGACCAACTTTGCGATGCTGATTCCGCCGGAAGGCCTGAACGGCT GGAAAATCTCCACGATCGGCGACGATATCGCGTGGATCAAACCGGGCAAGGACGGCCGCCTGTATGCGATCAATCCGGAA GCCGGCTACTTCGGCGTGGCGCCGGGCACGAGCGAAAAGACCAACTTCAACGCAATGGCCACGTTGAAGGAAAACGTGAT CTTCACGAACGTCGCGCTGACCGACGACGGCGACGTCTGGTGGGAAGGCATGACCGACGAACCGCCGGCGCACCTGATCG ACTGGCAGGGCAAGGACTGGACGCCGGCCGGCGCGAAGCAAAGCGGCCGCAAGGCGGCGCACCCGAACGCGCGCTTTACG GCGCCGGCCTCGCAATGCCCGTCTATCGACGCCGACTGGGAAAACCCGGCGGGCGTCGCGATCGACGCGTTCATCTTCGG CGGACGCCGTTCCACCACCGTGCCGCTCGTCACCGAAGCGCGCAACTGGGTGGAAGGCGTCTACATGGCGGCGACTATGG GCTCGGAGACCACCGCCGCCGCCGCCGGCCAGCAGGGCGTGGTGCGCCGCGACCCGTTCGCGATGCTGCCGTTCTGCGGC TACAACATGAGCGACTACTTCGGTCACTGGCTGAAAACGGGCGAGCGTCTGGAGCAACTCGGCGCGAAGCTGCCGAAAAT CTTCTGCGTCAACTGGTTTCGCAAGGGCGCGGACGGCAAGTTCGTCTGGCCGGGCTTCGGCGAGAACATGCGGGTGCTGA GCTGGATGGTCGGCCGGGTCGAAGGCTCTGCTCAAGGTGCGGAACATGCATTCGGCGTGTCGCCTCACTATGAGGACATC GACTGGAGCGGGCTGAATTTCAGCCGCGAGCAGTTTGAGCAGGTGATTTCCGTGGATGACGCCGCCTGGCGCGACGAACT CGCCCTGCACGCCGAGCTGTTTGACACATTGCAACACGGCTTGCCGCCGGCGCTAACCCAGGCCAAACGCACACTCGAAG GAAAACTCGCCGCCTGA
Upstream 100 bases:
>100_bases GGGTGGCAGGAACCCCGGCGTGAAGAATTGAACGCCTCTCGCATGCAGCGTCGCTGGGCTTGTACCGTTTTTTTATTGCT TTCAAAACGGAGACAAGTCG
Downstream 100 bases:
>100_bases TCAGGTGAGTATTCACTTCGCATGAAGAACCGCCTTCGGGCGGTTTTCTTTTGGTGCCGACAGCTTGGCGATTTTTTCTG ATTCCGCAACGCCAACGCGA
Product: phosphoenolpyruvate carboxykinase
Products: NA
Alternate protein names: PEP carboxykinase; PEPCK; Phosphoenolpyruvate carboxylase [H]
Number of amino acids: Translated: 618; Mature: 618
Protein sequence:
>618_residues MNHPSFEGQPTIEAPAWVKNRKLVDWVQRVAAMTKPDRIVWCDGSQEEYDRLCAQMVEAGTLKKLNPAKRPNSYLAWSDP SDVARVEDRTFICSQQREDAGPTNNWVAPAEMRSTLGGLFEGAMRGRTMYVVPFSMGPLGSPIAHIGVELSDSPYVVTNM RIMTRMGRKVYDVLGEDGEFVPCVHSVGAPLAAGEKDVPWPCNATKYIVHFPESREIWSYGSGYGGNALLGKKCFALRIA STMGRDEGWLAEHMLILGVTSPEGRKHHVAAAFPSACGKTNFAMLIPPEGLNGWKISTIGDDIAWIKPGKDGRLYAINPE AGYFGVAPGTSEKTNFNAMATLKENVIFTNVALTDDGDVWWEGMTDEPPAHLIDWQGKDWTPAGAKQSGRKAAHPNARFT APASQCPSIDADWENPAGVAIDAFIFGGRRSTTVPLVTEARNWVEGVYMAATMGSETTAAAAGQQGVVRRDPFAMLPFCG YNMSDYFGHWLKTGERLEQLGAKLPKIFCVNWFRKGADGKFVWPGFGENMRVLSWMVGRVEGSAQGAEHAFGVSPHYEDI DWSGLNFSREQFEQVISVDDAAWRDELALHAELFDTLQHGLPPALTQAKRTLEGKLAA
Sequences:
>Translated_618_residues MNHPSFEGQPTIEAPAWVKNRKLVDWVQRVAAMTKPDRIVWCDGSQEEYDRLCAQMVEAGTLKKLNPAKRPNSYLAWSDP SDVARVEDRTFICSQQREDAGPTNNWVAPAEMRSTLGGLFEGAMRGRTMYVVPFSMGPLGSPIAHIGVELSDSPYVVTNM RIMTRMGRKVYDVLGEDGEFVPCVHSVGAPLAAGEKDVPWPCNATKYIVHFPESREIWSYGSGYGGNALLGKKCFALRIA STMGRDEGWLAEHMLILGVTSPEGRKHHVAAAFPSACGKTNFAMLIPPEGLNGWKISTIGDDIAWIKPGKDGRLYAINPE AGYFGVAPGTSEKTNFNAMATLKENVIFTNVALTDDGDVWWEGMTDEPPAHLIDWQGKDWTPAGAKQSGRKAAHPNARFT APASQCPSIDADWENPAGVAIDAFIFGGRRSTTVPLVTEARNWVEGVYMAATMGSETTAAAAGQQGVVRRDPFAMLPFCG YNMSDYFGHWLKTGERLEQLGAKLPKIFCVNWFRKGADGKFVWPGFGENMRVLSWMVGRVEGSAQGAEHAFGVSPHYEDI DWSGLNFSREQFEQVISVDDAAWRDELALHAELFDTLQHGLPPALTQAKRTLEGKLAA >Mature_618_residues MNHPSFEGQPTIEAPAWVKNRKLVDWVQRVAAMTKPDRIVWCDGSQEEYDRLCAQMVEAGTLKKLNPAKRPNSYLAWSDP SDVARVEDRTFICSQQREDAGPTNNWVAPAEMRSTLGGLFEGAMRGRTMYVVPFSMGPLGSPIAHIGVELSDSPYVVTNM RIMTRMGRKVYDVLGEDGEFVPCVHSVGAPLAAGEKDVPWPCNATKYIVHFPESREIWSYGSGYGGNALLGKKCFALRIA STMGRDEGWLAEHMLILGVTSPEGRKHHVAAAFPSACGKTNFAMLIPPEGLNGWKISTIGDDIAWIKPGKDGRLYAINPE AGYFGVAPGTSEKTNFNAMATLKENVIFTNVALTDDGDVWWEGMTDEPPAHLIDWQGKDWTPAGAKQSGRKAAHPNARFT APASQCPSIDADWENPAGVAIDAFIFGGRRSTTVPLVTEARNWVEGVYMAATMGSETTAAAAGQQGVVRRDPFAMLPFCG YNMSDYFGHWLKTGERLEQLGAKLPKIFCVNWFRKGADGKFVWPGFGENMRVLSWMVGRVEGSAQGAEHAFGVSPHYEDI DWSGLNFSREQFEQVISVDDAAWRDELALHAELFDTLQHGLPPALTQAKRTLEGKLAA
Specific function: Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle [H]
COG id: COG1274
COG function: function code C; Phosphoenolpyruvate carboxykinase (GTP)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoenolpyruvate carboxykinase [GTP] family [H]
Homologues:
Organism=Homo sapiens, GI187281517, Length=607, Percent_Identity=50.2471169686985, Blast_Score=586, Evalue=1e-167, Organism=Homo sapiens, GI66346721, Length=606, Percent_Identity=50.4950495049505, Blast_Score=570, Evalue=1e-162, Organism=Homo sapiens, GI66346723, Length=371, Percent_Identity=54.4474393530997, Blast_Score=390, Evalue=1e-108, Organism=Caenorhabditis elegans, GI17555492, Length=645, Percent_Identity=48.062015503876, Blast_Score=554, Evalue=1e-158, Organism=Caenorhabditis elegans, GI71989645, Length=580, Percent_Identity=49.1379310344828, Blast_Score=550, Evalue=1e-156, Organism=Caenorhabditis elegans, GI71989658, Length=580, Percent_Identity=49.1379310344828, Blast_Score=548, Evalue=1e-156, Organism=Caenorhabditis elegans, GI32564411, Length=579, Percent_Identity=50.9499136442142, Blast_Score=545, Evalue=1e-155, Organism=Caenorhabditis elegans, GI71989653, Length=576, Percent_Identity=49.3055555555556, Blast_Score=545, Evalue=1e-155, Organism=Caenorhabditis elegans, GI32564407, Length=531, Percent_Identity=51.4124293785311, Blast_Score=504, Evalue=1e-143, Organism=Caenorhabditis elegans, GI71989649, Length=491, Percent_Identity=51.7311608961303, Blast_Score=489, Evalue=1e-138, Organism=Caenorhabditis elegans, GI32564409, Length=377, Percent_Identity=48.2758620689655, Blast_Score=321, Evalue=7e-88, Organism=Caenorhabditis elegans, GI17540956, Length=523, Percent_Identity=25.8126195028681, Blast_Score=169, Evalue=4e-42, Organism=Drosophila melanogaster, GI24655085, Length=605, Percent_Identity=50.2479338842975, Blast_Score=579, Evalue=1e-165, Organism=Drosophila melanogaster, GI24655082, Length=607, Percent_Identity=48.9291598023064, Blast_Score=566, Evalue=1e-161, Organism=Drosophila melanogaster, GI161077226, Length=576, Percent_Identity=50.1736111111111, Blast_Score=546, Evalue=1e-155, Organism=Drosophila melanogaster, GI24655088, Length=510, Percent_Identity=52.156862745098, Blast_Score=507, Evalue=1e-144,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018091 - InterPro: IPR013035 - InterPro: IPR008209 - InterPro: IPR008210 [H]
Pfam domain/function: PF00821 PEPCK [H]
EC number: =4.1.1.32 [H]
Molecular weight: Translated: 67868; Mature: 67868
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: PS00505 PEPCK_GTP ; PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHPSFEGQPTIEAPAWVKNRKLVDWVQRVAAMTKPDRIVWCDGSQEEYDRLCAQMVEAG CCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCC TLKKLNPAKRPNSYLAWSDPSDVARVEDRTFICSQQREDAGPTNNWVAPAEMRSTLGGLF CCCCCCCCCCCCCEEEECCCCHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH EGAMRGRTMYVVPFSMGPLGSPIAHIGVELSDSPYVVTNMRIMTRMGRKVYDVLGEDGEF HHHHCCCEEEEEEECCCCCCCCHHHEEEEECCCCEEEEHHHHHHHHHHHHHHHHCCCCCE VPCVHSVGAPLAAGEKDVPWPCNATKYIVHFPESREIWSYGSGYGGNALLGKKCFALRIA EHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHCCCCCCCCCCHHCCHHHHHHHH STMGRDEGWLAEHMLILGVTSPEGRKHHVAAAFPSACGKTNFAMLIPPEGLNGWKISTIG HHCCCCCCHHEEEEEEEEECCCCCCCEEEEEECHHHCCCCCEEEEECCCCCCCEEEEECC DDIAWIKPGKDGRLYAINPEAGYFGVAPGTSEKTNFNAMATLKENVIFTNVALTDDGDVW CCEEEECCCCCCEEEEECCCCCEEECCCCCCCCCCCCEEEEEECCEEEEEEEEECCCCEE WEGMTDEPPAHLIDWQGKDWTPAGAKQSGRKAAHPNARFTAPASQCPSIDADWENPAGVA ECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEECCHHHCCCCCCCCCCCCCEE IDAFIFGGRRSTTVPLVTEARNWVEGVYMAATMGSETTAAAAGQQGVVRRDPFAMLPFCG EEEEEECCCCCCCCEEHHHHHHHHHHEEEEEECCCCHHHHHCCCCCCEECCCCEECCCCC YNMSDYFGHWLKTGERLEQLGAKLPKIFCVNWFRKGADGKFVWPGFGENMRVLSWMVGRV CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHCCCCCCEECCCCCCCHHHHHHHHHHC EGSAQGAEHAFGVSPHYEDIDWSGLNFSREQFEQVISVDDAAWRDELALHAELFDTLQHG CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC LPPALTQAKRTLEGKLAA CCHHHHHHHHHHCCCCCC >Mature Secondary Structure MNHPSFEGQPTIEAPAWVKNRKLVDWVQRVAAMTKPDRIVWCDGSQEEYDRLCAQMVEAG CCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCC TLKKLNPAKRPNSYLAWSDPSDVARVEDRTFICSQQREDAGPTNNWVAPAEMRSTLGGLF CCCCCCCCCCCCCEEEECCCCHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH EGAMRGRTMYVVPFSMGPLGSPIAHIGVELSDSPYVVTNMRIMTRMGRKVYDVLGEDGEF HHHHCCCEEEEEEECCCCCCCCHHHEEEEECCCCEEEEHHHHHHHHHHHHHHHHCCCCCE VPCVHSVGAPLAAGEKDVPWPCNATKYIVHFPESREIWSYGSGYGGNALLGKKCFALRIA EHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHCCCCCCCCCCHHCCHHHHHHHH STMGRDEGWLAEHMLILGVTSPEGRKHHVAAAFPSACGKTNFAMLIPPEGLNGWKISTIG HHCCCCCCHHEEEEEEEEECCCCCCCEEEEEECHHHCCCCCEEEEECCCCCCCEEEEECC DDIAWIKPGKDGRLYAINPEAGYFGVAPGTSEKTNFNAMATLKENVIFTNVALTDDGDVW CCEEEECCCCCCEEEEECCCCCEEECCCCCCCCCCCCEEEEEECCEEEEEEEEECCCCEE WEGMTDEPPAHLIDWQGKDWTPAGAKQSGRKAAHPNARFTAPASQCPSIDADWENPAGVA ECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEECCHHHCCCCCCCCCCCCCEE IDAFIFGGRRSTTVPLVTEARNWVEGVYMAATMGSETTAAAAGQQGVVRRDPFAMLPFCG EEEEEECCCCCCCCEEHHHHHHHHHHEEEEEECCCCHHHHHCCCCCCEECCCCEECCCCC YNMSDYFGHWLKTGERLEQLGAKLPKIFCVNWFRKGADGKFVWPGFGENMRVLSWMVGRV CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHCCCCCCEECCCCCCCHHHHHHHHHHC EGSAQGAEHAFGVSPHYEDIDWSGLNFSREQFEQVISVDDAAWRDELALHAELFDTLQHG CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC LPPALTQAKRTLEGKLAA CCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA