| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91781422
Identifier: 91781422
GI number: 91781422
Start: 51583
End: 52461
Strand: Direct
Name: 91781422
Synonym: Bxe_A4424
Alternate gene names: NA
Gene position: 51583-52461 (Clockwise)
Preceding gene: 91781421
Following gene: 91781424
Centisome position: 1.05
GC content: 65.64
Gene sequence:
>879_bases ATGTTCGATCAGGTCGTATTCGCCGGCGGCGGCAATCGCTGCTGGTGGCAGGCGGGTTTCTGGGACGTGGTGCAGCCGGA GTTGCGGATCCGGCCGCGCGTCATCACCGGCATTTCGGCCGGCGCCGCCACCGCGTGCATGCTCTACACGCGCGATTCCG ACTGGGTCATGCGCTATTACGAGGACGCGCTACGCCACAACACCCGCAACGCTTACTGGGGCAATCTGTTGCGGGGCGAA TCGGTGTTTCCGCATTACCGCATCTATCGTCAGGCGCTGCTCGACATCTACGGCGAGAAGTTTTCGACGCTCGCCGACGC GCCGGAAATCCGCATCGGCGTGTCGCATCTGCCGCGCTGGCTCGGTGCGCGCAGCGCGGTGGCCGCTGGCCTGATCGCGT ACAACATCGAAAAGTACGTGCGTAAGACGCTGCATCCCACGCTCGGTCAGACGCTCGGCTTTCATCCTGAATTCGTGCGC GCGCAGGACTGCGCAAGCGTCGAGGATCTGGCGGATCTGATCCTGCAATCGTCGAGTACGCCGCCCTTCACGCCGGTTCT CCGACGCAACGGCCGGCCGGTACTGGACGGCGGGATGGTCGACAACGTGCCGGTCGGCGCGCTCGACGCCGAGGCGCCGG GCTACGTGCTGGTGATGGTCACGCGCCTCTATCCTCGTCCGCAGATGTTCGTCGTGCCGCACGGCGTGCAGCAACGGCTC TATGTGCAGCCGTCGCGCAAGGTGCCGATTTCCAGCTGGGATTACACGAGTCCCTCGCAGATGGTTCACGCGTACAACCT CGGCCGCGCGGACGGCGAGACCTTCCTCGAACGCGTGCCCGATCTGCTGGAAGCCGGCGCCCACGAAGCGGCGCGCTGA
Upstream 100 bases:
>100_bases CTGTTCGACGAATCCGGCAACATGGCCGTCCACGCCACCACGACCTACGCACTGCTCGACTAGAACGGGCCACAAGAGCC GCATAAGAGGAAAAATCAGG
Downstream 100 bases:
>100_bases ATCGCGCACACGGCGCGGCGCGAAACCACACGGCGACGAGCGGCGCGCCCGCGGCAACGCGCTCGCCAAAGAAAGAGCCG GGCGCTTAGCGTCGGCGGCC
Product: putative patatin-like phospholipase protein
Products: NA
Alternate protein names: Patatin-Like Phospholipase; PatatiN-Like Phospholipase; Patatin-Like Phospholipase Family Protein
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MFDQVVFAGGGNRCWWQAGFWDVVQPELRIRPRVITGISAGAATACMLYTRDSDWVMRYYEDALRHNTRNAYWGNLLRGE SVFPHYRIYRQALLDIYGEKFSTLADAPEIRIGVSHLPRWLGARSAVAAGLIAYNIEKYVRKTLHPTLGQTLGFHPEFVR AQDCASVEDLADLILQSSSTPPFTPVLRRNGRPVLDGGMVDNVPVGALDAEAPGYVLVMVTRLYPRPQMFVVPHGVQQRL YVQPSRKVPISSWDYTSPSQMVHAYNLGRADGETFLERVPDLLEAGAHEAAR
Sequences:
>Translated_292_residues MFDQVVFAGGGNRCWWQAGFWDVVQPELRIRPRVITGISAGAATACMLYTRDSDWVMRYYEDALRHNTRNAYWGNLLRGE SVFPHYRIYRQALLDIYGEKFSTLADAPEIRIGVSHLPRWLGARSAVAAGLIAYNIEKYVRKTLHPTLGQTLGFHPEFVR AQDCASVEDLADLILQSSSTPPFTPVLRRNGRPVLDGGMVDNVPVGALDAEAPGYVLVMVTRLYPRPQMFVVPHGVQQRL YVQPSRKVPISSWDYTSPSQMVHAYNLGRADGETFLERVPDLLEAGAHEAAR >Mature_292_residues MFDQVVFAGGGNRCWWQAGFWDVVQPELRIRPRVITGISAGAATACMLYTRDSDWVMRYYEDALRHNTRNAYWGNLLRGE SVFPHYRIYRQALLDIYGEKFSTLADAPEIRIGVSHLPRWLGARSAVAAGLIAYNIEKYVRKTLHPTLGQTLGFHPEFVR AQDCASVEDLADLILQSSSTPPFTPVLRRNGRPVLDGGMVDNVPVGALDAEAPGYVLVMVTRLYPRPQMFVVPHGVQQRL YVQPSRKVPISSWDYTSPSQMVHAYNLGRADGETFLERVPDLLEAGAHEAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32789; Mature: 32789
Theoretical pI: Translated: 8.08; Mature: 8.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDQVVFAGGGNRCWWQAGFWDVVQPELRIRPRVITGISAGAATACMLYTRDSDWVMRYY CCCCEEEECCCCEEEEECCCHHHCCCCCEECCEEEECCCCCCCEEEEEEECCCHHHHHHH EDALRHNTRNAYWGNLLRGESVFPHYRIYRQALLDIYGEKFSTLADAPEIRIGVSHLPRW HHHHHCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHH LGARSAVAAGLIAYNIEKYVRKTLHPTLGQTLGFHPEFVRAQDCASVEDLADLILQSSST HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHCCCC PPFTPVLRRNGRPVLDGGMVDNVPVGALDAEAPGYVLVMVTRLYPRPQMFVVPHGVQQRL CCCCHHHHCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEEHHCCCCCEEEECCCCCCEE YVQPSRKVPISSWDYTSPSQMVHAYNLGRADGETFLERVPDLLEAGAHEAAR EECCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHCCC >Mature Secondary Structure MFDQVVFAGGGNRCWWQAGFWDVVQPELRIRPRVITGISAGAATACMLYTRDSDWVMRYY CCCCEEEECCCCEEEEECCCHHHCCCCCEECCEEEECCCCCCCEEEEEEECCCHHHHHHH EDALRHNTRNAYWGNLLRGESVFPHYRIYRQALLDIYGEKFSTLADAPEIRIGVSHLPRW HHHHHCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHH LGARSAVAAGLIAYNIEKYVRKTLHPTLGQTLGFHPEFVRAQDCASVEDLADLILQSSST HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHCCCC PPFTPVLRRNGRPVLDGGMVDNVPVGALDAEAPGYVLVMVTRLYPRPQMFVVPHGVQQRL CCCCHHHHCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEEHHCCCCCEEEECCCCCCEE YVQPSRKVPISSWDYTSPSQMVHAYNLGRADGETFLERVPDLLEAGAHEAAR EECCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA