| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is osmY [H]
Identifier: 91214090
GI number: 91214090
Start: 5035264
End: 5035947
Strand: Direct
Name: osmY [H]
Synonym: UTI89_C5145
Alternate gene names: 91214090
Gene position: 5035264-5035947 (Clockwise)
Preceding gene: 91214089
Following gene: 91214091
Centisome position: 99.4
GC content: 50.29
Gene sequence:
>684_bases GTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGAGCAAACATACAGGAATAAATCGAT GACTATGACAAGACTGAAGATTTCGAAAACTCTGCTGGCTGTAATGTTGACCTCTGCCGTCGCGACCGGCTCTGCCTACG CAGAAAACAACGCGCAGACTACCAATGAAAGCGCAGGGCAAAAAGTCGATAGCTCTATGAATAAAGTCGGTAATTTCATG GATGACAGCGCCATCACCGCGAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTCAA AACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCTCAGGCCGAAGAGGCGGTGAAAGTGGCGAAAG GTGTTGAGGGCGTGACCTCTGTCAGCGACAAACTGCACGTTCGCGACGCTAAAGAAGGCTCTGTGAAAGGCTACGCGGGT GACACCGCCACTACCAGTGAAATCAAAGCCAAACTGCTGGCAGATGACATTGTCCCTTCCCGTCATGTGAAAGTTGAAAC CACCGATGGCGTGGTCCAGCTCTCCGGTACCGTAGATTCTCAGGCACAGAGCGACCGTGCTGAAAGTATCGCCAAAGCGG TAGATGGTGTGAAAAGCGTTAAAAATGATCTGAAAACTAAGTAA
Upstream 100 bases:
>100_bases ATTGTCATTCTACCGATATTAATAACTGATTCAGAGGCTGTAATGGTCGTTATTCATCACCCATCGCTTTTGTGATGGCG ACCATTGACTTCTGTAGAGG
Downstream 100 bases:
>100_bases TTCGTCGTAATTCGACCTCCCGAACTTTGTCGGGAGGCGCGATGTGCACCACACTAAAAATATCGCATTGAGTGATTTTC ACGCTCATATCAAGCGGTGA
Product: periplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MKSLPIQQCNLVLPGSNYEQTYRNKSMTMTRLKISKTLLAVMLTSAVATGSAYAENNAQTTNESAGQKVDSSMNKVGNFM DDSAITAKVKAALVDHDNIKSTDISVKTDQKVVTLSGFVESQAQAEEAVKVAKGVEGVTSVSDKLHVRDAKEGSVKGYAG DTATTSEIKAKLLADDIVPSRHVKVETTDGVVQLSGTVDSQAQSDRAESIAKAVDGVKSVKNDLKTK
Sequences:
>Translated_227_residues MKSLPIQQCNLVLPGSNYEQTYRNKSMTMTRLKISKTLLAVMLTSAVATGSAYAENNAQTTNESAGQKVDSSMNKVGNFM DDSAITAKVKAALVDHDNIKSTDISVKTDQKVVTLSGFVESQAQAEEAVKVAKGVEGVTSVSDKLHVRDAKEGSVKGYAG DTATTSEIKAKLLADDIVPSRHVKVETTDGVVQLSGTVDSQAQSDRAESIAKAVDGVKSVKNDLKTK >Mature_227_residues MKSLPIQQCNLVLPGSNYEQTYRNKSMTMTRLKISKTLLAVMLTSAVATGSAYAENNAQTTNESAGQKVDSSMNKVGNFM DDSAITAKVKAALVDHDNIKSTDISVKTDQKVVTLSGFVESQAQAEEAVKVAKGVEGVTSVSDKLHVRDAKEGSVKGYAG DTATTSEIKAKLLADDIVPSRHVKVETTDGVVQLSGTVDSQAQSDRAESIAKAVDGVKSVKNDLKTK
Specific function: Unknown
COG id: COG2823
COG function: function code R; Predicted periplasmic or secreted lipoprotein
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 BON domains [H]
Homologues:
Organism=Escherichia coli, GI1790836, Length=201, Percent_Identity=100, Blast_Score=394, Evalue=1e-111,
Paralogues:
None
Copy number: 2960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 780 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 160 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 80 Molecules/Cell In: Stati
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007055 - InterPro: IPR014004 [H]
Pfam domain/function: PF04972 BON [H]
EC number: NA
Molecular weight: Translated: 24068; Mature: 24068
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: PS50914 BON
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLPIQQCNLVLPGSNYEQTYRNKSMTMTRLKISKTLLAVMLTSAVATGSAYAENNAQT CCCCCCCCCCEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCC TNESAGQKVDSSMNKVGNFMDDSAITAKVKAALVDHDNIKSTDISVKTDQKVVTLSGFVE CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEEHHHHH SQAQAEEAVKVAKGVEGVTSVSDKLHVRDAKEGSVKGYAGDTATTSEIKAKLLADDIVPS HHHHHHHHHHHHHCCCHHHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC RHVKVETTDGVVQLSGTVDSQAQSDRAESIAKAVDGVKSVKNDLKTK CCEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKSLPIQQCNLVLPGSNYEQTYRNKSMTMTRLKISKTLLAVMLTSAVATGSAYAENNAQT CCCCCCCCCCEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCC TNESAGQKVDSSMNKVGNFMDDSAITAKVKAALVDHDNIKSTDISVKTDQKVVTLSGFVE CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEEHHHHH SQAQAEEAVKVAKGVEGVTSVSDKLHVRDAKEGSVKGYAGDTATTSEIKAKLLADDIVPS HHHHHHHHHHHHHCCCHHHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC RHVKVETTDGVVQLSGTVDSQAQSDRAESIAKAVDGVKSVKNDLKTK CCEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]