| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is ygfQ [H]
Identifier: 91212262
GI number: 91212262
Start: 3205788
End: 3207155
Strand: Direct
Name: ygfQ [H]
Synonym: UTI89_C3269
Alternate gene names: 91212262
Gene position: 3205788-3207155 (Clockwise)
Preceding gene: 91212261
Following gene: 91212265
Centisome position: 63.28
GC content: 53.14
Gene sequence:
>1368_bases ATGTCTGGAGACATCCTACAAACACCGGACGCACCAAAGCCACAGGGCGCGCTGGATAATTATTTTAAAATTACCGCTCG TGGCAGTACCGTTCGTCAGGAAGTACTGGCTGGCTTAACGACCTTTCTGGCCATGGTTTATTCCGTTATCGTCGTTCCGG GAATGCTGGGCAAAGCAGGTTTTCCTCCCGCAGCTGTGTTTGTTGCCACCTGTCTGGTCGCGGGCTTCGGCTCGTTGCTG ATGGGGTTATGGGCCAATTTGCCAATGGCGATTGGTTGCGCTATTTCCTTGACGGCGTTTACCGCATTCAGTCTGGTACT CGGGCAACAAATTAGCGTTCCTGTCGCACTGGGCGCAGTCTTTCTGATGGGCGTCATCTTCACCGCTATTTCCGTAACCG GTGTGCGTACCTGGATCTTACGTAATTTGCCGATGGGGATCGCTCACGGTACAGGTATCGGTATCGGCCTGTTTCTGCTG CTGATTGCTGCTAACGGTGTGGGAATGGTTATAAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCCTTTACCTC CTTCCCGGTGATGATGAGCTTACTGGGGCTGGCGGTCATCTTCGGTCTGGAAAAGTGCCGCGTACCCGGCGGGATCTTGT TGGTGATTATTGCAATTTCGATCATCGGCTTAATCTTTGACCCAGCGGTGAAGTACCACGGTCTGGTGGCGATGCCAAGC CTGACTGGCGAAGATGGTAAGTCTCTGATTTTCAGCCTCGATATTATGGGCGCACTCCAGCCAACTGTACTTCCGAGTGT ACTGGCATTGGTGATGACCGCAGTGTTCGACGCCACTGGCACCATCCGTGCCGTCGCCGGTCAGGCGAATTTGTTGGATA AAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGACTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCA GCGCCCGCGGCGGTTTATATCGAATCAGCGGCAGGAACCGCCGCCGGGGGGAAAACCGGTTTAACCGCAACCGTGGTTGG TGTGTTGTTCCTGATGATTCTGTTTTTATCACCGTTATCGTTTCTGATCCCCGGTTATGCCACAGCTCCCGCACTGATGT ACGTGGGTTTGCTGATGTTAAGCAACGTCTCGAAGCTGGATTTCAACGATTTTATTGACGCAATGGCTGGCCTGGTGTGT GCCGTGTTCATCGTTCTGACTTGTAATATCGTTACCGGTATTATGCTGGGCTTTGTAACACTGGTGGTGGGTCGCGTCTT TGCGCGCGAATGGCAAAAGCTGAATATTGGTACGGTGATCATTACTGCCGCACTGGTCGCGTTTTACGCGGGTGGTTGGG CAATCTAA
Upstream 100 bases:
>100_bases TGGGCGATGACCGTTCGATCTACCGCACCTACGTTGATGGTCGTCTGGTGTACGAACGCAACTAATAATAAAACTTTAAC ATCCTCGTGAGGACATCATT
Downstream 100 bases:
>100_bases TAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCACAGAGGATTCTCACTGCTGGCAACAATACGCTGCTGGCGGAC TCGCCTGAGTTCTCTTTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 455; Mature: 454
Protein sequence:
>455_residues MSGDILQTPDAPKPQGALDNYFKITARGSTVRQEVLAGLTTFLAMVYSVIVVPGMLGKAGFPPAAVFVATCLVAGFGSLL MGLWANLPMAIGCAISLTAFTAFSLVLGQQISVPVALGAVFLMGVIFTAISVTGVRTWILRNLPMGIAHGTGIGIGLFLL LIAANGVGMVIKNPIEGLPVALGAFTSFPVMMSLLGLAVIFGLEKCRVPGGILLVIIAISIIGLIFDPAVKYHGLVAMPS LTGEDGKSLIFSLDIMGALQPTVLPSVLALVMTAVFDATGTIRAVAGQANLLDKDNQIINGGKALTSDSVSSIFSGLVGA APAAVYIESAAGTAAGGKTGLTATVVGVLFLMILFLSPLSFLIPGYATAPALMYVGLLMLSNVSKLDFNDFIDAMAGLVC AVFIVLTCNIVTGIMLGFVTLVVGRVFAREWQKLNIGTVIITAALVAFYAGGWAI
Sequences:
>Translated_455_residues MSGDILQTPDAPKPQGALDNYFKITARGSTVRQEVLAGLTTFLAMVYSVIVVPGMLGKAGFPPAAVFVATCLVAGFGSLL MGLWANLPMAIGCAISLTAFTAFSLVLGQQISVPVALGAVFLMGVIFTAISVTGVRTWILRNLPMGIAHGTGIGIGLFLL LIAANGVGMVIKNPIEGLPVALGAFTSFPVMMSLLGLAVIFGLEKCRVPGGILLVIIAISIIGLIFDPAVKYHGLVAMPS LTGEDGKSLIFSLDIMGALQPTVLPSVLALVMTAVFDATGTIRAVAGQANLLDKDNQIINGGKALTSDSVSSIFSGLVGA APAAVYIESAAGTAAGGKTGLTATVVGVLFLMILFLSPLSFLIPGYATAPALMYVGLLMLSNVSKLDFNDFIDAMAGLVC AVFIVLTCNIVTGIMLGFVTLVVGRVFAREWQKLNIGTVIITAALVAFYAGGWAI >Mature_454_residues SGDILQTPDAPKPQGALDNYFKITARGSTVRQEVLAGLTTFLAMVYSVIVVPGMLGKAGFPPAAVFVATCLVAGFGSLLM GLWANLPMAIGCAISLTAFTAFSLVLGQQISVPVALGAVFLMGVIFTAISVTGVRTWILRNLPMGIAHGTGIGIGLFLLL IAANGVGMVIKNPIEGLPVALGAFTSFPVMMSLLGLAVIFGLEKCRVPGGILLVIIAISIIGLIFDPAVKYHGLVAMPSL TGEDGKSLIFSLDIMGALQPTVLPSVLALVMTAVFDATGTIRAVAGQANLLDKDNQIINGGKALTSDSVSSIFSGLVGAA PAAVYIESAAGTAAGGKTGLTATVVGVLFLMILFLSPLSFLIPGYATAPALMYVGLLMLSNVSKLDFNDFIDAMAGLVCA VFIVLTCNIVTGIMLGFVTLVVGRVFAREWQKLNIGTVIITAALVAFYAGGWAI
Specific function: Unknown
COG id: COG2252
COG function: function code R; Permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]
Homologues:
Organism=Escherichia coli, GI48994909, Length=455, Percent_Identity=99.5604395604396, Blast_Score=879, Evalue=0.0, Organism=Escherichia coli, GI1790499, Length=450, Percent_Identity=82.4444444444444, Blast_Score=726, Evalue=0.0, Organism=Escherichia coli, GI87082309, Length=447, Percent_Identity=37.1364653243848, Blast_Score=275, Evalue=5e-75, Organism=Escherichia coli, GI1790150, Length=435, Percent_Identity=35.632183908046, Blast_Score=250, Evalue=2e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006043 [H]
Pfam domain/function: PF00860 Xan_ur_permease [H]
EC number: NA
Molecular weight: Translated: 46805; Mature: 46674
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGDILQTPDAPKPQGALDNYFKITARGSTVRQEVLAGLTTFLAMVYSVIVVPGMLGKAG CCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC FPPAAVFVATCLVAGFGSLLMGLWANLPMAIGCAISLTAFTAFSLVLGQQISVPVALGAV CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH FLMGVIFTAISVTGVRTWILRNLPMGIAHGTGIGIGLFLLLIAANGVGMVIKNPIEGLPV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCH ALGAFTSFPVMMSLLGLAVIFGLEKCRVPGGILLVIIAISIIGLIFDPAVKYHGLVAMPS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECC LTGEDGKSLIFSLDIMGALQPTVLPSVLALVMTAVFDATGTIRAVAGQANLLDKDNQIIN CCCCCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCEEC GGKALTSDSVSSIFSGLVGAAPAAVYIESAAGTAAGGKTGLTATVVGVLFLMILFLSPLS CCCCCCHHHHHHHHHHHHHCCCHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH FLIPGYATAPALMYVGLLMLSNVSKLDFNDFIDAMAGLVCAVFIVLTCNIVTGIMLGFVT HHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVVGRVFAREWQKLNIGTVIITAALVAFYAGGWAI HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SGDILQTPDAPKPQGALDNYFKITARGSTVRQEVLAGLTTFLAMVYSVIVVPGMLGKAG CCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC FPPAAVFVATCLVAGFGSLLMGLWANLPMAIGCAISLTAFTAFSLVLGQQISVPVALGAV CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH FLMGVIFTAISVTGVRTWILRNLPMGIAHGTGIGIGLFLLLIAANGVGMVIKNPIEGLPV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCH ALGAFTSFPVMMSLLGLAVIFGLEKCRVPGGILLVIIAISIIGLIFDPAVKYHGLVAMPS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECC LTGEDGKSLIFSLDIMGALQPTVLPSVLALVMTAVFDATGTIRAVAGQANLLDKDNQIIN CCCCCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCEEC GGKALTSDSVSSIFSGLVGAAPAAVYIESAAGTAAGGKTGLTATVVGVLFLMILFLSPLS CCCCCCHHHHHHHHHHHHHCCCHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH FLIPGYATAPALMYVGLLMLSNVSKLDFNDFIDAMAGLVCAVFIVLTCNIVTGIMLGFVT HHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVVGRVFAREWQKLNIGTVIITAALVAFYAGGWAI HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]