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The map label for this gene is ygfO [H]

Identifier: 91212260

GI number: 91212260

Start: 3202961

End: 3204418

Strand: Direct

Name: ygfO [H]

Synonym: UTI89_C3267

Alternate gene names: 91212260

Gene position: 3202961-3204418 (Clockwise)

Preceding gene: 91212259

Following gene: 91212261

Centisome position: 63.23

GC content: 48.08

Gene sequence:

>1458_bases
GTGGGAATTTATTTTACTAATTCAGATGATCAAATTTACTTTAAAAGGAGTGAAGGGATGTCTGATATAAACCATGCAGG
TTCTGACCTTATATTTGAACTGGAGGATCGCCCTCCCTTTCATCAGGCTCTCGTAGGTGCCATTACCCATCTGTTGGCAA
TTTTCGTTCCGATGGTAACCCCCGCGTTAATCGTGGGTGCGGCCTTACAGCTTTCCGCTGAAACAACTGCCTATCTTGTT
TCTATGGCGATGATCGCCTCTGGTATTGGTACCTGGTTACAAGTAAACCGCTACGGCATCGTCGGTTCTGGTTTACTTTC
AATTCAGTCAGTCAATTTTTCATTTGTTACGGTCATGATTGCGCTGGGCAGCAGCATGAAAAGCGACGGTTTTCACGAAG
AGTTAATCATGTCGTCGCTCCTCGGCGTCTCCTTCGTTGGCGCATTTCTGGTTGTCGGCTCTTCTTTTATCCTGCCCTAT
TTACGTCGGGTTATTACGCCTACCGTCAGCGGCATTGTGGTGCTGATGATCGGCTTAAGCCTGATTAAAGTCGGCATTAT
TGATTTTGGTGGAGGATTTGCAGCCAAAAGCAGCGGTACGTTCGGCAATTACGAACATCTCGGCGTTGGCTTATTGGTTT
TGATTGTGGTGATCGGCTTTAACTGCTGCCGCAGTCCGTTGCTACGCATGGGTGGGATCGCCATTGGGCTATGTGTCGGC
TATATCGCATCGTTATGCCTGGGCATGGTGGATTTCAGCAGTATGCGCAATTTGCCGTTAATCACCATCCCGCATCCGTT
CAAATACGGCTTTAGTTTTAGCTTCCATCAGTTCCTGGTGGTTGGCACGATTTATCTGCTTAGCGTGCTGGAAGCTGTCG
GCGATATCACCGCCACGGCAATGGTTTCCCGCCGTCCCATTCAGGGGGAAGAGTATCAGTCCCGACTGAAAGGCGGCGTG
CTGGCAGATGGTCTGGTTTCTGTTATCGCCTCCGCTGTCGGTTCATTACCATTAACCACGTTTGCGCAAAATAATGGGGT
TATTCAGATGACTGGCGTCGCTTCACGTTATGTCGGGCGAACCATCGCGGTAATGCTGGTTATCCTCGGCTTATTTCCGA
TGATTGGCGGCTTTTTTACGACCATTCCCTCGGCAGTTCTGGGAGGCGCAATGACGTTGATGTTTTCCATGATTGCCATC
GCAGGGATTCGCATCATCATCACCAACGGTTTAAAGCGCCGAGAAACACTTATTGTCGCCACTTCTTTAGGTTTAGGACT
TGGCGTCTCCTACGATCCCGAAATTTTTAAAATATTGCCAGCCTCTATTTATGTATTAGTTGAAAACCCTATTTGTGCTG
GCGGGTTAACTGCGATTTTATTAAATATTATCCTCCCTGGTGGCTACCGACAGGAAAACGTTCTGCCTGGTATTACCTCA
GCGGAAGAGATGGATTAA

Upstream 100 bases:

>100_bases
ATGGCCGCTTCGGCGGCCTGTTTCTCTGTTTGAACGATGACTAAATAGTGACTGCGAAAATGAGATAAGCCGTTCTCAAG
GCGTCCTGCGCCCCAAATTC

Downstream 100 bases:

>100_bases
CAGTAAAGGAGTCAATGATGTCAGGAGAACACACGTTAAAAGCGGTACGAGGCAGTTTTATTGATGTCACCCGTACGGTC
GATAACCCGGAAGAAATTGC

Product: putative transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 485; Mature: 484

Protein sequence:

>485_residues
MGIYFTNSDDQIYFKRSEGMSDINHAGSDLIFELEDRPPFHQALVGAITHLLAIFVPMVTPALIVGAALQLSAETTAYLV
SMAMIASGIGTWLQVNRYGIVGSGLLSIQSVNFSFVTVMIALGSSMKSDGFHEELIMSSLLGVSFVGAFLVVGSSFILPY
LRRVITPTVSGIVVLMIGLSLIKVGIIDFGGGFAAKSSGTFGNYEHLGVGLLVLIVVIGFNCCRSPLLRMGGIAIGLCVG
YIASLCLGMVDFSSMRNLPLITIPHPFKYGFSFSFHQFLVVGTIYLLSVLEAVGDITATAMVSRRPIQGEEYQSRLKGGV
LADGLVSVIASAVGSLPLTTFAQNNGVIQMTGVASRYVGRTIAVMLVILGLFPMIGGFFTTIPSAVLGGAMTLMFSMIAI
AGIRIIITNGLKRRETLIVATSLGLGLGVSYDPEIFKILPASIYVLVENPICAGGLTAILLNIILPGGYRQENVLPGITS
AEEMD

Sequences:

>Translated_485_residues
MGIYFTNSDDQIYFKRSEGMSDINHAGSDLIFELEDRPPFHQALVGAITHLLAIFVPMVTPALIVGAALQLSAETTAYLV
SMAMIASGIGTWLQVNRYGIVGSGLLSIQSVNFSFVTVMIALGSSMKSDGFHEELIMSSLLGVSFVGAFLVVGSSFILPY
LRRVITPTVSGIVVLMIGLSLIKVGIIDFGGGFAAKSSGTFGNYEHLGVGLLVLIVVIGFNCCRSPLLRMGGIAIGLCVG
YIASLCLGMVDFSSMRNLPLITIPHPFKYGFSFSFHQFLVVGTIYLLSVLEAVGDITATAMVSRRPIQGEEYQSRLKGGV
LADGLVSVIASAVGSLPLTTFAQNNGVIQMTGVASRYVGRTIAVMLVILGLFPMIGGFFTTIPSAVLGGAMTLMFSMIAI
AGIRIIITNGLKRRETLIVATSLGLGLGVSYDPEIFKILPASIYVLVENPICAGGLTAILLNIILPGGYRQENVLPGITS
AEEMD
>Mature_484_residues
GIYFTNSDDQIYFKRSEGMSDINHAGSDLIFELEDRPPFHQALVGAITHLLAIFVPMVTPALIVGAALQLSAETTAYLVS
MAMIASGIGTWLQVNRYGIVGSGLLSIQSVNFSFVTVMIALGSSMKSDGFHEELIMSSLLGVSFVGAFLVVGSSFILPYL
RRVITPTVSGIVVLMIGLSLIKVGIIDFGGGFAAKSSGTFGNYEHLGVGLLVLIVVIGFNCCRSPLLRMGGIAIGLCVGY
IASLCLGMVDFSSMRNLPLITIPHPFKYGFSFSFHQFLVVGTIYLLSVLEAVGDITATAMVSRRPIQGEEYQSRLKGGVL
ADGLVSVIASAVGSLPLTTFAQNNGVIQMTGVASRYVGRTIAVMLVILGLFPMIGGFFTTIPSAVLGGAMTLMFSMIAIA
GIRIIITNGLKRRETLIVATSLGLGLGVSYDPEIFKILPASIYVLVENPICAGGLTAILLNIILPGGYRQENVLPGITSA
EEMD

Specific function: Specific, proton motive force-dependent high-affinity transporter for xanthine [H]

COG id: COG2233

COG function: function code F; Xanthine/uracil permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xanthine/uracil permease family. Nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) subfamily [H]

Homologues:

Organism=Escherichia coli, GI87082178, Length=466, Percent_Identity=100, Blast_Score=914, Evalue=0.0,
Organism=Escherichia coli, GI1790087, Length=456, Percent_Identity=44.2982456140351, Blast_Score=358, Evalue=1e-100,
Organism=Escherichia coli, GI87082181, Length=465, Percent_Identity=26.8817204301075, Blast_Score=144, Evalue=1e-35,
Organism=Escherichia coli, GI87081818, Length=407, Percent_Identity=27.027027027027, Blast_Score=92, Evalue=8e-20,
Organism=Escherichia coli, GI1788843, Length=409, Percent_Identity=25.9168704156479, Blast_Score=72, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17558856, Length=497, Percent_Identity=24.9496981891348, Blast_Score=85, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17542260, Length=231, Percent_Identity=26.4069264069264, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71993493, Length=231, Percent_Identity=26.4069264069264, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17541904, Length=263, Percent_Identity=25.4752851711027, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017588
- InterPro:   IPR006042
- InterPro:   IPR006043 [H]

Pfam domain/function: PF00860 Xan_ur_permease [H]

EC number: NA

Molecular weight: Translated: 51363; Mature: 51231

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: PS01116 XANTH_URACIL_PERMASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIYFTNSDDQIYFKRSEGMSDINHAGSDLIFELEDRPPFHQALVGAITHLLAIFVPMVT
CCEEEECCCCEEEEECCCCCCHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
PALIVGAALQLSAETTAYLVSMAMIASGIGTWLQVNRYGIVGSGLLSIQSVNFSFVTVMI
HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHEEECCCEEECCHHEEEECCHHHHHHHH
ALGSSMKSDGFHEELIMSSLLGVSFVGAFLVVGSSFILPYLRRVITPTVSGIVVLMIGLS
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIKVGIIDFGGGFAAKSSGTFGNYEHLGVGLLVLIVVIGFNCCRSPLLRMGGIAIGLCVG
HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YIASLCLGMVDFSSMRNLPLITIPHPFKYGFSFSFHQFLVVGTIYLLSVLEAVGDITATA
HHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVSRRPIQGEEYQSRLKGGVLADGLVSVIASAVGSLPLTTFAQNNGVIQMTGVASRYVGR
HHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCCEEEECCHHHHHHHH
TIAVMLVILGLFPMIGGFFTTIPSAVLGGAMTLMFSMIAIAGIRIIITNGLKRRETLIVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHEEEEE
TSLGLGLGVSYDPEIFKILPASIYVLVENPICAGGLTAILLNIILPGGYRQENVLPGITS
EECCCCCCCCCCCHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
AEEMD
HHCCC
>Mature Secondary Structure 
GIYFTNSDDQIYFKRSEGMSDINHAGSDLIFELEDRPPFHQALVGAITHLLAIFVPMVT
CEEEECCCCEEEEECCCCCCHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
PALIVGAALQLSAETTAYLVSMAMIASGIGTWLQVNRYGIVGSGLLSIQSVNFSFVTVMI
HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHEEECCCEEECCHHEEEECCHHHHHHHH
ALGSSMKSDGFHEELIMSSLLGVSFVGAFLVVGSSFILPYLRRVITPTVSGIVVLMIGLS
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIKVGIIDFGGGFAAKSSGTFGNYEHLGVGLLVLIVVIGFNCCRSPLLRMGGIAIGLCVG
HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YIASLCLGMVDFSSMRNLPLITIPHPFKYGFSFSFHQFLVVGTIYLLSVLEAVGDITATA
HHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVSRRPIQGEEYQSRLKGGVLADGLVSVIASAVGSLPLTTFAQNNGVIQMTGVASRYVGR
HHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCCEEEECCHHHHHHHH
TIAVMLVILGLFPMIGGFFTTIPSAVLGGAMTLMFSMIAIAGIRIIITNGLKRRETLIVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHEEEEE
TSLGLGLGVSYDPEIFKILPASIYVLVENPICAGGLTAILLNIILPGGYRQENVLPGITS
EECCCCCCCCCCCHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
AEEMD
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]