Click here to switch to the map view.

The map label for this gene is atoE [H]

Identifier: 91211517

GI number: 91211517

Start: 2461059

End: 2462381

Strand: Direct

Name: atoE [H]

Synonym: UTI89_C2505

Alternate gene names: 91211517

Gene position: 2461059-2462381 (Clockwise)

Preceding gene: 91211516

Following gene: 91211518

Centisome position: 48.58

GC content: 53.51

Gene sequence:

>1323_bases
ATGATTGGTCGCATATCGCGTTTTATGACGCGTTTTGTCAGCCGATGGCTTCCCGATCCACTGATCTTTGCCATGTTGCT
GACATTGCTAACATTCGTGATCGCGCTTTGGTTAACACCACAAACGCCGATCAGCATGGTGAAAATGTGGGGTGACGGTT
TCTGGAACTTGCTGGCGTTTGGTATGCAGATGGCGCTTATCATCGTTACCGGTCATGCCCTTGCCAGCTCCGCGCCGGTG
AAAAGTTTGCTGCGTACTGCCGCCTCCGCCGCAAAGACGCCCGTACAGGGCGTCATGCTGGTTACTTTCTTCGGTTCAGT
TGCTTGTGTCATCAACTGGGGATTTGGTTTGGTTGTCGGTGCAATGTTCGCCCGTGAAGTCGCCCGGCGAGTACCCGGTT
CTGATTATCCGTTGCTCATTGCCTGCGCCTACATTGGTTTTCTCACCTGGGGTGGCGGTTTCTCTGGCTCAATGCCTCTG
TTGGCTGCAACACCGGGCAACCCGGTTGAGCATATCGCCGGGCTGATCCCGGTGGGCGATACTCTGTTCAGTGGTTTTAA
TATTTTCATCACTGTGGCGTTGATTGTGGTGATGCCATTTATCACCCGCATGATGATGCCAAAACCGTCTGACGTGGTGA
GTATCGATCCGAAACTACTCATGGAAGAGGCTGATTTTCAAAAGCAACTACCGAAAGATGCTCCACCGTCCGAGCGACTG
GAAGAAAGCCGTATTCTGACGTTGATCATCGGCGCACTCGGTATCGCTTACCTGGCGATGTACTTCAGCGAACATGGCTT
CAACATCACCATCAATACCGTCAACCTGATGTTTATGATTGCGGGTCTGCTGCTACATAAAACGCCAATGGCTTATATGC
GTGCTATCAGCGCGGCAGCACGCAGTACCGCCGGTATTCTGGTGCAATTCCCCTTCTACGCGGGGATCCAACTGATGATG
GAGCACTCCGGTCTGGGCGGACTCATTACCGAATTCTTCATCAATGTTGCGAACAAAGACACCTTCCCGGTCATGACCTT
TTTTAGTTCTGCACTGATTAACTTCGCCGTTCCGTCTGGCGGCGGGCACTGGGTTATTCAGGGGCCGTTCGTGATGCCCG
CAGCCCAGGCGCTGGGCGCTGATCTCGGTAAATCGGTAATGGCGATCGCCTACGGCGAGCAATGGATGAACATGGCACAA
CCGTTCTGGGCGCTGCCAGCACTGGCAATCGCCGGACTCGGTGTCCGCGACATCATGGGCTATTGCATCACTGCCCTGCT
CTTCTCCGGCGTCATTTTCGTCATTGGTTTAACGCTGTTCTGA

Upstream 100 bases:

>100_bases
TCACCGAAATTGCCGACGGGTGTGATTTAGCCACCGTGCGTGCCAAAACAGAAGCTCGGTTTGAAGTAGCTGCCGATCTG
AATACGCAACGGGGTGATTT

Downstream 100 bases:

>100_bases
CGGCAACCCTACAGACAGAAGGAATATAAAATGAAAAATTGTGTCATCGTCAGTGCGGTACGTACTGCTATCGGTAGTTT
TAACGGTTCACTCGCTTCCA

Product: short-chain fatty acids transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MIGRISRFMTRFVSRWLPDPLIFAMLLTLLTFVIALWLTPQTPISMVKMWGDGFWNLLAFGMQMALIIVTGHALASSAPV
KSLLRTAASAAKTPVQGVMLVTFFGSVACVINWGFGLVVGAMFAREVARRVPGSDYPLLIACAYIGFLTWGGGFSGSMPL
LAATPGNPVEHIAGLIPVGDTLFSGFNIFITVALIVVMPFITRMMMPKPSDVVSIDPKLLMEEADFQKQLPKDAPPSERL
EESRILTLIIGALGIAYLAMYFSEHGFNITINTVNLMFMIAGLLLHKTPMAYMRAISAAARSTAGILVQFPFYAGIQLMM
EHSGLGGLITEFFINVANKDTFPVMTFFSSALINFAVPSGGGHWVIQGPFVMPAAQALGADLGKSVMAIAYGEQWMNMAQ
PFWALPALAIAGLGVRDIMGYCITALLFSGVIFVIGLTLF

Sequences:

>Translated_440_residues
MIGRISRFMTRFVSRWLPDPLIFAMLLTLLTFVIALWLTPQTPISMVKMWGDGFWNLLAFGMQMALIIVTGHALASSAPV
KSLLRTAASAAKTPVQGVMLVTFFGSVACVINWGFGLVVGAMFAREVARRVPGSDYPLLIACAYIGFLTWGGGFSGSMPL
LAATPGNPVEHIAGLIPVGDTLFSGFNIFITVALIVVMPFITRMMMPKPSDVVSIDPKLLMEEADFQKQLPKDAPPSERL
EESRILTLIIGALGIAYLAMYFSEHGFNITINTVNLMFMIAGLLLHKTPMAYMRAISAAARSTAGILVQFPFYAGIQLMM
EHSGLGGLITEFFINVANKDTFPVMTFFSSALINFAVPSGGGHWVIQGPFVMPAAQALGADLGKSVMAIAYGEQWMNMAQ
PFWALPALAIAGLGVRDIMGYCITALLFSGVIFVIGLTLF
>Mature_440_residues
MIGRISRFMTRFVSRWLPDPLIFAMLLTLLTFVIALWLTPQTPISMVKMWGDGFWNLLAFGMQMALIIVTGHALASSAPV
KSLLRTAASAAKTPVQGVMLVTFFGSVACVINWGFGLVVGAMFAREVARRVPGSDYPLLIACAYIGFLTWGGGFSGSMPL
LAATPGNPVEHIAGLIPVGDTLFSGFNIFITVALIVVMPFITRMMMPKPSDVVSIDPKLLMEEADFQKQLPKDAPPSERL
EESRILTLIIGALGIAYLAMYFSEHGFNITINTVNLMFMIAGLLLHKTPMAYMRAISAAARSTAGILVQFPFYAGIQLMM
EHSGLGGLITEFFINVANKDTFPVMTFFSSALINFAVPSGGGHWVIQGPFVMPAAQALGADLGKSVMAIAYGEQWMNMAQ
PFWALPALAIAGLGVRDIMGYCITALLFSGVIFVIGLTLF

Specific function: Responsible for the intake of short-chain fatty acids [H]

COG id: COG2031

COG function: function code I; Short chain fatty acids transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788553, Length=440, Percent_Identity=99.7727272727273, Blast_Score=879, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006161
- InterPro:   IPR006160 [H]

Pfam domain/function: PF02667 SCFA_trans [H]

EC number: NA

Molecular weight: Translated: 47546; Mature: 47546

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGRISRFMTRFVSRWLPDPLIFAMLLTLLTFVIALWLTPQTPISMVKMWGDGFWNLLAF
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHH
GMQMALIIVTGHALASSAPVKSLLRTAASAAKTPVQGVMLVTFFGSVACVINWGFGLVVG
HHHHHHHHEECHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHH
AMFAREVARRVPGSDYPLLIACAYIGFLTWGGGFSGSMPLLAATPGNPVEHIAGLIPVGD
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHCCCCH
TLFSGFNIFITVALIVVMPFITRMMMPKPSDVVSIDPKLLMEEADFQKQLPKDAPPSERL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHCCCCCCCHHHH
EESRILTLIIGALGIAYLAMYFSEHGFNITINTVNLMFMIAGLLLHKTPMAYMRAISAAA
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
RSTAGILVQFPFYAGIQLMMEHSGLGGLITEFFINVANKDTFPVMTFFSSALINFAVPSG
HCCCCEEEEECHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC
GGHWVIQGPFVMPAAQALGADLGKSVMAIAYGEQWMNMAQPFWALPALAIAGLGVRDIMG
CCEEEEECCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHH
YCITALLFSGVIFVIGLTLF
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIGRISRFMTRFVSRWLPDPLIFAMLLTLLTFVIALWLTPQTPISMVKMWGDGFWNLLAF
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHH
GMQMALIIVTGHALASSAPVKSLLRTAASAAKTPVQGVMLVTFFGSVACVINWGFGLVVG
HHHHHHHHEECHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHH
AMFAREVARRVPGSDYPLLIACAYIGFLTWGGGFSGSMPLLAATPGNPVEHIAGLIPVGD
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHCCCCH
TLFSGFNIFITVALIVVMPFITRMMMPKPSDVVSIDPKLLMEEADFQKQLPKDAPPSERL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHCCCCCCCHHHH
EESRILTLIIGALGIAYLAMYFSEHGFNITINTVNLMFMIAGLLLHKTPMAYMRAISAAA
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
RSTAGILVQFPFYAGIQLMMEHSGLGGLITEFFINVANKDTFPVMTFFSSALINFAVPSG
HCCCCEEEEECHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC
GGHWVIQGPFVMPAAQALGADLGKSVMAIAYGEQWMNMAQPFWALPALAIAGLGVRDIMG
CCEEEEECCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHH
YCITALLFSGVIFVIGLTLF
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]