Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 90296804

Identifier: 90296804

GI number: 90296804

Start: 2506240

End: 2506704

Strand: Direct

Name: 90296804

Synonym: CYB_2409

Alternate gene names: NA

Gene position: 2506240-2506704 (Clockwise)

Preceding gene: 86609845

Following gene: 86609846

Centisome position: 82.26

GC content: 53.12

Gene sequence:

>465_bases
ATGAAAGATCAACACAACCTAGCATTGGATCGGGGTTTGATTCGACAAATCATGAGGTCTTTGGATATGAGGGAATCGGT
GATCTACCAAGAGTGGCGGGCAGAAGCTCTGCGAGAGGGGCTGGAAGAAGGGCGCAAAGAAGGACGCAGAGAAGGACTAC
AACTGGGCCTGCAACAAGGGCTACAACAAGGATTGCAACAAGGATTACAACAGGGATTGCAACACGGGGAAGCAACGCTG
GTTTTGCGGCTGCTCAGGCGGAAGTTGGGATCCCTTGACCCGGCCCTTGAGAATAAGATTTGGGCTTTGTCAACGTCACA
ACTGGAGGCGCTGGGGGAAGCTCTGTTGGACTTCAACAGCTTGGAGGATTTAACTGCCTGGCTAGCCCGTCAGCTAGAAA
CCGCAGGAGCCCCGCTCTCTGCCCACAGGGCAAGGGTCGGGAGGAATGTGAGTAAAATGCAATAA

Upstream 100 bases:

>100_bases
ATAAGTTAAAGCAGTACCGGCATCTATTTTCTCGTTTTGACAAATTGGCCAGGAACTTCTTGAGTTTTCTCTATCTCGTC
AGTGCTCTCTTTTGGCTCAA

Downstream 100 bases:

>100_bases
GGCTATGACCCAAGTCCTGACCGTTTCTTGCAAGCTCAAGGTGTCCCAGTCGCAAGCCGCCAAATTGGACGAGACATTGG
ATGCTTTGTCGCTACGCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MKDQHNLALDRGLIRQIMRSLDMRESVIYQEWRAEALREGLEEGRKEGRREGLQLGLQQGLQQGLQQGLQQGLQHGEATL
VLRLLRRKLGSLDPALENKIWALSTSQLEALGEALLDFNSLEDLTAWLARQLETAGAPLSAHRARVGRNVSKMQ

Sequences:

>Translated_154_residues
MKDQHNLALDRGLIRQIMRSLDMRESVIYQEWRAEALREGLEEGRKEGRREGLQLGLQQGLQQGLQQGLQQGLQHGEATL
VLRLLRRKLGSLDPALENKIWALSTSQLEALGEALLDFNSLEDLTAWLARQLETAGAPLSAHRARVGRNVSKMQ
>Mature_154_residues
MKDQHNLALDRGLIRQIMRSLDMRESVIYQEWRAEALREGLEEGRKEGRREGLQLGLQQGLQQGLQQGLQQGLQHGEATL
VLRLLRRKLGSLDPALENKIWALSTSQLEALGEALLDFNSLEDLTAWLARQLETAGAPLSAHRARVGRNVSKMQ

Specific function: Unknown

COG id: COG5464

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17358; Mature: 17358

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDQHNLALDRGLIRQIMRSLDMRESVIYQEWRAEALREGLEEGRKEGRREGLQLGLQQG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQQGLQQGLQQGLQHGEATLVLRLLRRKLGSLDPALENKIWALSTSQLEALGEALLDFNS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEDLTAWLARQLETAGAPLSAHRARVGRNVSKMQ
HHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHCC
>Mature Secondary Structure
MKDQHNLALDRGLIRQIMRSLDMRESVIYQEWRAEALREGLEEGRKEGRREGLQLGLQQG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQQGLQQGLQQGLQHGEATLVLRLLRRKLGSLDPALENKIWALSTSQLEALGEALLDFNS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEDLTAWLARQLETAGAPLSAHRARVGRNVSKMQ
HHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA