| Definition | Chlamydophila felis Fe/C-56, complete genome. |
|---|---|
| Accession | NC_007899 |
| Length | 1,166,239 |
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The map label for this gene is hemH
Identifier: 89898676
GI number: 89898676
Start: 1021716
End: 1022672
Strand: Direct
Name: hemH
Synonym: CF0869
Alternate gene names: 89898676
Gene position: 1021716-1022672 (Clockwise)
Preceding gene: 89898673
Following gene: 89898682
Centisome position: 87.61
GC content: 39.18
Gene sequence:
>957_bases ATGGTTTCTGTGTACTTATTAGCAAATTTTGGCGGTCCTCGTCATGCTAGTGACATTGAAGTTTTTCTTACTTCATTACT TACAGATCGTGATGTTACTGGGAAGTTTCTTCCACCTTTCATTCACAAACGTTTATTTTCATTCATTGCTAAAAAACGTG TTGCTAAAGTTCTCCCCCAGTACAACTGTATTGGTGGATTTTCTCCTATATATCGAGATACAGAAGACCTTGCGGACACC CTATCCTTGTACTTAGATGCCCCCGTAATTACCTTTCACCGTTATTTACCTGATACGCACCAGCTTACAGTTCAGAGATT GAAAGCCTTTGGAGATTGTCCCGTTATTGGTGTTCCCCTCTTTCCTCATTTTACTTATTCTGTGACAGGAAGTATTGTGA GGTTTATTCATGCTCACCTTCCGTTACTAAATATCTCTTGGATATCCCATTTTGGAAATCACCCTCAGTTTATTTTCTGC ATGATTGATCATATTCTGAAATTTTTACAATCCCACGATATCTCCATACACGACTGCTGTCTATTATTTTCTGCCCACGG GCTTCCTATGAGATATATAAATAAAGGCGACCCATACAACAAGCATTGTGAAAAATCTTTCAAAACAATTTCTGAAAGAT TACCTAATATAGAAACTCACCTGTGTTATCAGTCTAAATTCGGTCCGGGGAGATGGCTAACGCCATCAACAAAAGACGTA TGCGAGACGTTAAAGACAGATAAAACATACGTTCTTATCGTGCCTTTTGGATTTACTTCAGATCACATCGAAACTCTTTA CGAAATAGAAAAGGAGTACATCCCGATACTTAAAGCTAGGGAATATAGAGCTTTACGCGTACCAGCGATTTACCAGTCCC CCGAATGGGCAGCATCTTTAGCTACAATCATTCAAAGTACACCACGTGCGGAGAAGGAAAGCTTAATAAAACCGTAA
Upstream 100 bases:
>100_bases TCATGTATCTTAAAAACTCATCTTAACTTTATGGGAAATTATGCAACTAATTGTTTTAATGCAATAGCTCCAATATTATT AAATAATAAAGCTTGTTACC
Downstream 100 bases:
>100_bases CAACTTAAGGAAGACGGTATTGCTGTTTGATAGCTTGATACTTACCGGAGCGAATGCTTTTTACTAGTCCCATATTAAAA CCCTCTAATAGGTTATCCTT
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MVSVYLLANFGGPRHASDIEVFLTSLLTDRDVTGKFLPPFIHKRLFSFIAKKRVAKVLPQYNCIGGFSPIYRDTEDLADT LSLYLDAPVITFHRYLPDTHQLTVQRLKAFGDCPVIGVPLFPHFTYSVTGSIVRFIHAHLPLLNISWISHFGNHPQFIFC MIDHILKFLQSHDISIHDCCLLFSAHGLPMRYINKGDPYNKHCEKSFKTISERLPNIETHLCYQSKFGPGRWLTPSTKDV CETLKTDKTYVLIVPFGFTSDHIETLYEIEKEYIPILKAREYRALRVPAIYQSPEWAASLATIIQSTPRAEKESLIKP
Sequences:
>Translated_318_residues MVSVYLLANFGGPRHASDIEVFLTSLLTDRDVTGKFLPPFIHKRLFSFIAKKRVAKVLPQYNCIGGFSPIYRDTEDLADT LSLYLDAPVITFHRYLPDTHQLTVQRLKAFGDCPVIGVPLFPHFTYSVTGSIVRFIHAHLPLLNISWISHFGNHPQFIFC MIDHILKFLQSHDISIHDCCLLFSAHGLPMRYINKGDPYNKHCEKSFKTISERLPNIETHLCYQSKFGPGRWLTPSTKDV CETLKTDKTYVLIVPFGFTSDHIETLYEIEKEYIPILKAREYRALRVPAIYQSPEWAASLATIIQSTPRAEKESLIKP >Mature_318_residues MVSVYLLANFGGPRHASDIEVFLTSLLTDRDVTGKFLPPFIHKRLFSFIAKKRVAKVLPQYNCIGGFSPIYRDTEDLADT LSLYLDAPVITFHRYLPDTHQLTVQRLKAFGDCPVIGVPLFPHFTYSVTGSIVRFIHAHLPLLNISWISHFGNHPQFIFC MIDHILKFLQSHDISIHDCCLLFSAHGLPMRYINKGDPYNKHCEKSFKTISERLPNIETHLCYQSKFGPGRWLTPSTKDV CETLKTDKTYVLIVPFGFTSDHIETLYEIEKEYIPILKAREYRALRVPAIYQSPEWAASLATIIQSTPRAEKESLIKP
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family
Homologues:
Organism=Homo sapiens, GI60499021, Length=324, Percent_Identity=34.5679012345679, Blast_Score=137, Evalue=1e-32, Organism=Homo sapiens, GI60499025, Length=324, Percent_Identity=34.5679012345679, Blast_Score=137, Evalue=1e-32, Organism=Escherichia coli, GI1786681, Length=313, Percent_Identity=23.6421725239617, Blast_Score=83, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6324750, Length=298, Percent_Identity=31.8791946308725, Blast_Score=128, Evalue=1e-30, Organism=Drosophila melanogaster, GI17864156, Length=291, Percent_Identity=30.2405498281787, Blast_Score=123, Evalue=1e-28, Organism=Drosophila melanogaster, GI24651774, Length=259, Percent_Identity=29.3436293436293, Blast_Score=104, Evalue=1e-22, Organism=Drosophila melanogaster, GI45552018, Length=147, Percent_Identity=32.6530612244898, Blast_Score=79, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HEMH_CHLFF (Q252Z7)
Other databases:
- EMBL: AP006861 - RefSeq: YP_515786.1 - ProteinModelPortal: Q252Z7 - SMR: Q252Z7 - STRING: Q252Z7 - GeneID: 3958490 - GenomeReviews: AP006861_GR - KEGG: cfe:CF0869 - eggNOG: COG0276 - HOGENOM: HBG697135 - OMA: RLPNIET - ProtClustDB: PRK00035 - BioCyc: CFEL264202:CF0869-MONOMER - GO: GO:0005737 - HAMAP: MF_00323 - InterPro: IPR001015 - InterPro: IPR019772 - PANTHER: PTHR11108 - TIGRFAMs: TIGR00109
Pfam domain/function: PF00762 Ferrochelatase
EC number: =4.99.1.1
Molecular weight: Translated: 36427; Mature: 36427
Theoretical pI: Translated: 8.39; Mature: 8.39
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSVYLLANFGGPRHASDIEVFLTSLLTDRDVTGKFLPPFIHKRLFSFIAKKRVAKVLPQ CEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC YNCIGGFSPIYRDTEDLADTLSLYLDAPVITFHRYLPDTHQLTVQRLKAFGDCPVIGVPL CCCCCCCCHHHCCHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCCCEEECCC FPHFTYSVTGSIVRFIHAHLPLLNISWISHFGNHPQFIFCMIDHILKFLQSHDISIHDCC CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHH LLFSAHGLPMRYINKGDPYNKHCEKSFKTISERLPNIETHLCYQSKFGPGRWLTPSTKDV HHHHCCCCCHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHEECCCCCCCCCCCCCHHHH CETLKTDKTYVLIVPFGFTSDHIETLYEIEKEYIPILKAREYRALRVPAIYQSPEWAASL HHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEECCCHHHHHH ATIIQSTPRAEKESLIKP HHHHHCCCCHHHHHCCCC >Mature Secondary Structure MVSVYLLANFGGPRHASDIEVFLTSLLTDRDVTGKFLPPFIHKRLFSFIAKKRVAKVLPQ CEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC YNCIGGFSPIYRDTEDLADTLSLYLDAPVITFHRYLPDTHQLTVQRLKAFGDCPVIGVPL CCCCCCCCHHHCCHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCCCEEECCC FPHFTYSVTGSIVRFIHAHLPLLNISWISHFGNHPQFIFCMIDHILKFLQSHDISIHDCC CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHH LLFSAHGLPMRYINKGDPYNKHCEKSFKTISERLPNIETHLCYQSKFGPGRWLTPSTKDV HHHHCCCCCHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHEECCCCCCCCCCCCCHHHH CETLKTDKTYVLIVPFGFTSDHIETLYEIEKEYIPILKAREYRALRVPAIYQSPEWAASL HHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEECCCHHHHHH ATIIQSTPRAEKESLIKP HHHHHCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA