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The map label for this gene is pmp14 [H]

Identifier: 89898539

GI number: 89898539

Start: 861182

End: 862252

Strand: Direct

Name: pmp14 [H]

Synonym: CF0732

Alternate gene names: 89898539

Gene position: 861182-862252 (Clockwise)

Preceding gene: 89898538

Following gene: 89898540

Centisome position: 73.84

GC content: 40.52

Gene sequence:

>1071_bases
ATGGGATCTAAAATCACAAAATACTTAACATCTATAAGTCTTACCTTTGCATTATTTGGCAATTTATATGCTGATGATGA
ACCACAACCTCCTGCAGATCAAACAACTCAAGAAGTTAAAATAAAAACAGACCGCAAGGGAGATTTTGTTGCAAATATCT
TATGGCAAAACACCTATGCAACAACATCTGGAATGAATGCCTCTAGAATCTCTCTAGAATCTCTATGCGATACATCTGTG
TATTTCGATCTTGAAGGCGGAGCTTTAGGTCTCTGTCTCAACCAACACAATATGGAAGAAAAATCAGGATTCCATATGGA
CGGTTCGGGGTACTATGCAGGAATTTCCTGTGGCTCTCCCTCCCTTTACAAAATTGGTGTTAAGTTTGTCTCTCAACATA
CAAATGCTAAGGCTCATCTTGGTCATGACGAAGTAGCAACCGATTACCTATCTCTAGGGGGATTCTGGGAAGTGCATGGC
TTTAAAGGAAGGCTCATCGTAGTAGGAAACTACCTCTATACTCACGGCTTTCATAACCTAAACCACACACATCGTCAGCT
CATAGGAGCTTGTCATGCTTCTTTCGAAAGCCAAACAGTAGGCAGTGCTCTGTCCTTTTACTTCCCTCTCAAAGCCAGAA
CAAATAACCGCCTGACCGTCATCCCATTTTTCCGCTATCAAGCCTTTGCCTCTAAACAAAACGACTTTAAGGAAAAAGGA
GCCCGTGTGCGCTCTTTTGTAACACCTGATAGTCTTGTGGATATTAGCGTGCCTTTTGGATTACATAATAAGTTAGCTTT
TCATGGATACTTCCCATCACTCTGGGAATTAGAGGTTTCCTATAAACCTACACTCCTACGCCAAAAACATTTAGTAGGCT
CTGTATTGGTTGCCGATGATGGTACTTGGATTTCTTCTCCAACAGAGGTCTGTTATCACGCCTTTTCTATAAATCTAAAA
AATGAAACTCAAGTATTCAAACACCTACATATCAACTTTGATTATCAATGCGACGCATCTTCATCGACATGCAGTCATTA
CATATTGGCAGGTGGAAAACTCGTTTTCTAA

Upstream 100 bases:

>100_bases
TTGTAGATTATTTAGAGAAAATCCCCAGACTCAACTATATGACGACTCTACACACTACGGGGATTATGTTTGTAATCTAC
ATAAGCCCCGAGAAAATGAT

Downstream 100 bases:

>100_bases
TCATTTGGCCATTGCAAAGAGGGAGTTGTCTCTCTTTGCAACAAAAGGCAGTTTTCAAAACCTCGCTTTATCTCTGACGA
CAGACGGATAGTTAACTACC

Product: polymorphic outer membrane protein

Products: NA

Alternate protein names: Polymorphic membrane protein 15 [H]

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MGSKITKYLTSISLTFALFGNLYADDEPQPPADQTTQEVKIKTDRKGDFVANILWQNTYATTSGMNASRISLESLCDTSV
YFDLEGGALGLCLNQHNMEEKSGFHMDGSGYYAGISCGSPSLYKIGVKFVSQHTNAKAHLGHDEVATDYLSLGGFWEVHG
FKGRLIVVGNYLYTHGFHNLNHTHRQLIGACHASFESQTVGSALSFYFPLKARTNNRLTVIPFFRYQAFASKQNDFKEKG
ARVRSFVTPDSLVDISVPFGLHNKLAFHGYFPSLWELEVSYKPTLLRQKHLVGSVLVADDGTWISSPTEVCYHAFSINLK
NETQVFKHLHINFDYQCDASSSTCSHYILAGGKLVF

Sequences:

>Translated_356_residues
MGSKITKYLTSISLTFALFGNLYADDEPQPPADQTTQEVKIKTDRKGDFVANILWQNTYATTSGMNASRISLESLCDTSV
YFDLEGGALGLCLNQHNMEEKSGFHMDGSGYYAGISCGSPSLYKIGVKFVSQHTNAKAHLGHDEVATDYLSLGGFWEVHG
FKGRLIVVGNYLYTHGFHNLNHTHRQLIGACHASFESQTVGSALSFYFPLKARTNNRLTVIPFFRYQAFASKQNDFKEKG
ARVRSFVTPDSLVDISVPFGLHNKLAFHGYFPSLWELEVSYKPTLLRQKHLVGSVLVADDGTWISSPTEVCYHAFSINLK
NETQVFKHLHINFDYQCDASSSTCSHYILAGGKLVF
>Mature_355_residues
GSKITKYLTSISLTFALFGNLYADDEPQPPADQTTQEVKIKTDRKGDFVANILWQNTYATTSGMNASRISLESLCDTSVY
FDLEGGALGLCLNQHNMEEKSGFHMDGSGYYAGISCGSPSLYKIGVKFVSQHTNAKAHLGHDEVATDYLSLGGFWEVHGF
KGRLIVVGNYLYTHGFHNLNHTHRQLIGACHASFESQTVGSALSFYFPLKARTNNRLTVIPFFRYQAFASKQNDFKEKGA
RVRSFVTPDSLVDISVPFGLHNKLAFHGYFPSLWELEVSYKPTLLRQKHLVGSVLVADDGTWISSPTEVCYHAFSINLKN
ETQVFKHLHINFDYQCDASSSTCSHYILAGGKLVF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall. Cell outer membrane; Peripheral membrane protein; Extracellular side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005546
- InterPro:   IPR003368
- InterPro:   IPR011427 [H]

Pfam domain/function: PF03797 Autotransporter; PF02415 Chlam_PMP; PF07548 ChlamPMP_M [H]

EC number: NA

Molecular weight: Translated: 39675; Mature: 39544

Theoretical pI: Translated: 7.48; Mature: 7.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSKITKYLTSISLTFALFGNLYADDEPQPPADQTTQEVKIKTDRKGDFVANILWQNTYA
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCEE
TTSGMNASRISLESLCDTSVYFDLEGGALGLCLNQHNMEEKSGFHMDGSGYYAGISCGSP
ECCCCCHHHEEHHHHCCCEEEEEECCCEEEEEECCCCCCHHCCCEECCCCEEEEEECCCC
SLYKIGVKFVSQHTNAKAHLGHDEVATDYLSLGGFWEVHGFKGRLIVVGNYLYTHGFHNL
CEEEHHHHHHHHCCCCEEECCCHHHHHHHHHCCCEEEEECCCEEEEEEECCCEECCCCCC
NHTHRQLIGACHASFESQTVGSALSFYFPLKARTNNRLTVIPFFRYQAFASKQNDFKEKG
CHHHHHHHHHHHCCCCCHHHCCEEEEEEEEEECCCCEEEEEEEHHHHHHHCCCHHHHHHC
ARVRSFVTPDSLVDISVPFGLHNKLAFHGYFPSLWELEVSYKPTLLRQKHLVGSVLVADD
CCEEEECCCCCEEEEEECCCCCCCEEEECCCCCEEEEEECCCCHHHHHHHCEEEEEEECC
GTWISSPTEVCYHAFSINLKNETQVFKHLHINFDYQCDASSSTCSHYILAGGKLVF
CCCCCCHHHHEEEEEEEEECCHHEEEEEEEEEEEEEECCCCCCCCEEEEECCEEEC
>Mature Secondary Structure 
GSKITKYLTSISLTFALFGNLYADDEPQPPADQTTQEVKIKTDRKGDFVANILWQNTYA
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCEE
TTSGMNASRISLESLCDTSVYFDLEGGALGLCLNQHNMEEKSGFHMDGSGYYAGISCGSP
ECCCCCHHHEEHHHHCCCEEEEEECCCEEEEEECCCCCCHHCCCEECCCCEEEEEECCCC
SLYKIGVKFVSQHTNAKAHLGHDEVATDYLSLGGFWEVHGFKGRLIVVGNYLYTHGFHNL
CEEEHHHHHHHHCCCCEEECCCHHHHHHHHHCCCEEEEECCCEEEEEEECCCEECCCCCC
NHTHRQLIGACHASFESQTVGSALSFYFPLKARTNNRLTVIPFFRYQAFASKQNDFKEKG
CHHHHHHHHHHHCCCCCHHHCCEEEEEEEEEECCCCEEEEEEEHHHHHHHCCCHHHHHHC
ARVRSFVTPDSLVDISVPFGLHNKLAFHGYFPSLWELEVSYKPTLLRQKHLVGSVLVADD
CCEEEECCCCCEEEEEECCCCCCCEEEECCCCCEEEEEECCCCHHHHHHHCEEEEEEECC
GTWISSPTEVCYHAFSINLKNETQVFKHLHINFDYQCDASSSTCSHYILAGGKLVF
CCCCCCHHHHEEEEEEEEECCHHEEEEEEEEEEEEEECCCCCCCCEEEEECCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362 [H]