| Definition | Chlamydophila felis Fe/C-56, complete genome. |
|---|---|
| Accession | NC_007899 |
| Length | 1,166,239 |
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The map label for this gene is pmp10 [H]
Identifier: 89898535
GI number: 89898535
Start: 848991
End: 851714
Strand: Direct
Name: pmp10 [H]
Synonym: CF0728
Alternate gene names: 89898535
Gene position: 848991-851714 (Clockwise)
Preceding gene: 89898534
Following gene: 89898536
Centisome position: 72.8
GC content: 42.03
Gene sequence:
>2724_bases ATGAAACTCTCTTCTTGTGGATTCTTACTCACCTCTTCCTTGTTATCTACCTGTTTAATATTTGCTGATGCTGCCTCACC GACTCCTAAAGCAACAACAGATCTATCCACAGGATTTGACGGTTCATCACAAGAATTTACTTCTAAAACGTCTAACGATA GTAACGAAACGACTTACAACGTAACGGCTGATATTTCTTTTGAAAATATCTCGACTATTACTGCATCGCAACCGCCGCCA CCACCACCACCGGCAGGAAATAAATCAGTTACCGAAGGCTGCTGCTTTAGTAACACCGCTGGGGACCTGATATTTACAGG AAATTCTCACTCTTTATCATTTAAAAATATTTCCCTAACCGGGAAAGGTGCGGCTATTAGCAATACCGCAGATACCAAAA CTACTACGTTATCGGGGTTTAGCCATCTTACGTTTTCTAGTTCCCCATCCTCTACCGTTGCAACTGGTAAGGGAGCAATT TTTTGTCAGGGATCTTCGCTAAATATAAGTAACAACACTCTTGTTTCTTTTACGGATAACCATTCTACGGAAAATGGTGG GGCGATTGGTTATGAAACCACCCCAACACCGCCCACACCTCCACCTACACCTCCTTCAAGTCCTAACCCATCGCCACAGG CAACCCATCTATCCTCAGTTTCATCCGGCACTCCTGTACAAAGTGCGCAAGCGACTGTCACGTTCCAAGGAAATACAGAA GTCTTATTTTCAGGCAACTCCTCAGGAAAAAACGGTGGAGCTATTTATGCTCAAAATCTAGCCATAACCTCTAGCAGTGG TACAATCTTATTCACTAACAATACTGCCAAGGAAAAAGGTGGGGCTATTGCCATTGCTAATAGCGGAACCCTGAGTTTAT CAGCTGAAGGCGGAAACATTATTTTTCAAGGAAATATAGCTAAAGATGGCTCCAACGCTATAGATCTAGGAACCTCAGCG AAAATTACGCAATTGCGTGCGACTCAAGGGAGTTCTATCTATTTCTATGATCCCATAACTGGAAACGGAGCTAATGTTAC TGATAAGCTAGTTATCAACAACCCAGACACTATTTCTGGGGGGGGGGGTTCCTCTGGACCAGGAGGAGCTATAAGATCTT CAGCTGCCCAGCCCTCGCCTAAAACCTATACGGGTACCGTAGTTTTTTCAGGGAAAAATAATAATACTAAAGCATTAACT AACGTCACTAGCTTAACACAGCCCGTGGAACTCGCTGCAGGAACTCTTGTTTTAGAAGATGGTGCGTTATTCGATACTAA ATCTTTCACCCAGAAAGATGATACCTCTAAAGTTTTACTAGAGCAAAACTCACAACTACAAGCCTCTGAAAATATAGATT TAAAAAATCTGTGGGTAGGTGTTTCAGACCCCACCACGAAAAGAGTTGCAGGAGTTAGCACTTCTGGATCGGGAAGTATC ACGATTTCAGGCCCCATTACCCTAGCCCTTTCCGATCCCAAATTTTATGAAAATCCAGATCTTGCGAAGGATCTAAACCA AGAGTTCATAAAGATAGCCGCAGCTAAAGGGACAATTACTCTTAATAATCAGTCAGATCCTGTCCAACAAGATATTGGAG ATCACTTAGGATACCAGGGTGTATGGAAACTCACCTGGGCAGATTCTCCATCAGGAAAAGAGAAAGTCGCTACATTAGAT TGGAAGCCGCAAGGTTATATTCCTCCTAGTGGGGATACACACAGCCAAACCTCTTTAGTTCCTAACAGTCTATGGGTCAT GGCCTTTGATGTTGCCGCTATTCAACGTCTTATCGAAGAAGAAGCAAAATCTGCAACAGGAGGAGATATCTGGGGAGCAG GATTGTCGAATTTCTTACAAGGAAAGAAAACAGATAAAAATCGTAAGTTCCGTAATATAAGCTCTGGCTATGCTGCAGGC ATAAGCTCAAAGTCTCTGCATGATTTTAAATTCAGCTTTAGTTTTAGCCAACTATTTGGCAGAGCTAAAGATTACGCGGG TGCAAGGATTCATGAAAAAATCCTTTCAGGATCCCTCTATGCGCAATACGATACAAAACTCTTACCTATTTTAAAATTCC TTTCTGGAACTTCTGTTTTCAGGCCTAGTTTTTTAACGCAAGTCTCTGAAGATTTCCCCATAAGTTTCCAAGCACAATTC GGGTATTTTTATGGAGACAACACCATGAAAATAAAATACCCTGATACAACGCAAGCAAATAGCTCTTGGGAAAATCATTG CTGTTCTGGAGATATAGGAGCCTCGATAACCATCCCCATGCAAAGCAAGGACGGTCTGATCCAAAAGGCTTCACCATTTG CAAAATTGCAAAGTATCTATGTATATCAAAAAGGATTCCAAGAAAAAGGACTAAGACGAAGAGCCTTTGATCACACATAT TTAATAAACATTTCTATCCCTCTAGGATTTAAAGTTCATGGAGAATCTTCATCTAAAGATCTTTATTATGAAGTTTCTGC AGCCTATGTAGGCGATGTTTACCGTCACAATCCTCAAAATACGACAACCCCGATAGTTGCAGGTGTTGTTGCCACCCCGT GGCTAACAACAGCGACATATCTACAAAGACATGCGGCAAGATTCCAAGGTTCGGGAAGCTACGCTTTAACCTCTTACATC CATCTTTTTGCTCAAGGAAGTGTTGAGCTACGTAAATTAGCAAGCAGCTATCACGCTAACGCTGGCAGTTCTATTCACTT CTAA
Upstream 100 bases:
>100_bases GGAGTTTTCCTTTTACATCTAAAGTCTCTATGACAATCTTGAAATTTTTTATTTTTTAGGTTATTGCGCGGAATATTCCC TCATAACCCAAGATCCTGTC
Downstream 100 bases:
>100_bases ATGTTTTCCCTGCTCTGTATGAGCAGGGAAAGTATTTCATTAAAATTTACAAAAACAGCTTTTATCTAATCCGCTAGATA AGAATATCTTAGAAAAAACC
Product: polymorphic outer membrane protein
Products: NA
Alternate protein names: Outer membrane protein 7; Polymorphic membrane protein 2 [H]
Number of amino acids: Translated: 907; Mature: 907
Protein sequence:
>907_residues MKLSSCGFLLTSSLLSTCLIFADAASPTPKATTDLSTGFDGSSQEFTSKTSNDSNETTYNVTADISFENISTITASQPPP PPPPAGNKSVTEGCCFSNTAGDLIFTGNSHSLSFKNISLTGKGAAISNTADTKTTTLSGFSHLTFSSSPSSTVATGKGAI FCQGSSLNISNNTLVSFTDNHSTENGGAIGYETTPTPPTPPPTPPSSPNPSPQATHLSSVSSGTPVQSAQATVTFQGNTE VLFSGNSSGKNGGAIYAQNLAITSSSGTILFTNNTAKEKGGAIAIANSGTLSLSAEGGNIIFQGNIAKDGSNAIDLGTSA KITQLRATQGSSIYFYDPITGNGANVTDKLVINNPDTISGGGGSSGPGGAIRSSAAQPSPKTYTGTVVFSGKNNNTKALT NVTSLTQPVELAAGTLVLEDGALFDTKSFTQKDDTSKVLLEQNSQLQASENIDLKNLWVGVSDPTTKRVAGVSTSGSGSI TISGPITLALSDPKFYENPDLAKDLNQEFIKIAAAKGTITLNNQSDPVQQDIGDHLGYQGVWKLTWADSPSGKEKVATLD WKPQGYIPPSGDTHSQTSLVPNSLWVMAFDVAAIQRLIEEEAKSATGGDIWGAGLSNFLQGKKTDKNRKFRNISSGYAAG ISSKSLHDFKFSFSFSQLFGRAKDYAGARIHEKILSGSLYAQYDTKLLPILKFLSGTSVFRPSFLTQVSEDFPISFQAQF GYFYGDNTMKIKYPDTTQANSSWENHCCSGDIGASITIPMQSKDGLIQKASPFAKLQSIYVYQKGFQEKGLRRRAFDHTY LINISIPLGFKVHGESSSKDLYYEVSAAYVGDVYRHNPQNTTTPIVAGVVATPWLTTATYLQRHAARFQGSGSYALTSYI HLFAQGSVELRKLASSYHANAGSSIHF
Sequences:
>Translated_907_residues MKLSSCGFLLTSSLLSTCLIFADAASPTPKATTDLSTGFDGSSQEFTSKTSNDSNETTYNVTADISFENISTITASQPPP PPPPAGNKSVTEGCCFSNTAGDLIFTGNSHSLSFKNISLTGKGAAISNTADTKTTTLSGFSHLTFSSSPSSTVATGKGAI FCQGSSLNISNNTLVSFTDNHSTENGGAIGYETTPTPPTPPPTPPSSPNPSPQATHLSSVSSGTPVQSAQATVTFQGNTE VLFSGNSSGKNGGAIYAQNLAITSSSGTILFTNNTAKEKGGAIAIANSGTLSLSAEGGNIIFQGNIAKDGSNAIDLGTSA KITQLRATQGSSIYFYDPITGNGANVTDKLVINNPDTISGGGGSSGPGGAIRSSAAQPSPKTYTGTVVFSGKNNNTKALT NVTSLTQPVELAAGTLVLEDGALFDTKSFTQKDDTSKVLLEQNSQLQASENIDLKNLWVGVSDPTTKRVAGVSTSGSGSI TISGPITLALSDPKFYENPDLAKDLNQEFIKIAAAKGTITLNNQSDPVQQDIGDHLGYQGVWKLTWADSPSGKEKVATLD WKPQGYIPPSGDTHSQTSLVPNSLWVMAFDVAAIQRLIEEEAKSATGGDIWGAGLSNFLQGKKTDKNRKFRNISSGYAAG ISSKSLHDFKFSFSFSQLFGRAKDYAGARIHEKILSGSLYAQYDTKLLPILKFLSGTSVFRPSFLTQVSEDFPISFQAQF GYFYGDNTMKIKYPDTTQANSSWENHCCSGDIGASITIPMQSKDGLIQKASPFAKLQSIYVYQKGFQEKGLRRRAFDHTY LINISIPLGFKVHGESSSKDLYYEVSAAYVGDVYRHNPQNTTTPIVAGVVATPWLTTATYLQRHAARFQGSGSYALTSYI HLFAQGSVELRKLASSYHANAGSSIHF >Mature_907_residues MKLSSCGFLLTSSLLSTCLIFADAASPTPKATTDLSTGFDGSSQEFTSKTSNDSNETTYNVTADISFENISTITASQPPP PPPPAGNKSVTEGCCFSNTAGDLIFTGNSHSLSFKNISLTGKGAAISNTADTKTTTLSGFSHLTFSSSPSSTVATGKGAI FCQGSSLNISNNTLVSFTDNHSTENGGAIGYETTPTPPTPPPTPPSSPNPSPQATHLSSVSSGTPVQSAQATVTFQGNTE VLFSGNSSGKNGGAIYAQNLAITSSSGTILFTNNTAKEKGGAIAIANSGTLSLSAEGGNIIFQGNIAKDGSNAIDLGTSA KITQLRATQGSSIYFYDPITGNGANVTDKLVINNPDTISGGGGSSGPGGAIRSSAAQPSPKTYTGTVVFSGKNNNTKALT NVTSLTQPVELAAGTLVLEDGALFDTKSFTQKDDTSKVLLEQNSQLQASENIDLKNLWVGVSDPTTKRVAGVSTSGSGSI TISGPITLALSDPKFYENPDLAKDLNQEFIKIAAAKGTITLNNQSDPVQQDIGDHLGYQGVWKLTWADSPSGKEKVATLD WKPQGYIPPSGDTHSQTSLVPNSLWVMAFDVAAIQRLIEEEAKSATGGDIWGAGLSNFLQGKKTDKNRKFRNISSGYAAG ISSKSLHDFKFSFSFSQLFGRAKDYAGARIHEKILSGSLYAQYDTKLLPILKFLSGTSVFRPSFLTQVSEDFPISFQAQF GYFYGDNTMKIKYPDTTQANSSWENHCCSGDIGASITIPMQSKDGLIQKASPFAKLQSIYVYQKGFQEKGLRRRAFDHTY LINISIPLGFKVHGESSSKDLYYEVSAAYVGDVYRHNPQNTTTPIVAGVVATPWLTTATYLQRHAARFQGSGSYALTSYI HLFAQGSVELRKLASSYHANAGSSIHF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted, cell wall. Cell outer membrane; Peripheral membrane protein; Extracellular side (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005546 - InterPro: IPR003368 - InterPro: IPR011427 [H]
Pfam domain/function: PF03797 Autotransporter; PF07548 ChlamPMP_M [H]
EC number: NA
Molecular weight: Translated: 95789; Mature: 95789
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLSSCGFLLTSSLLSTCLIFADAASPTPKATTDLSTGFDGSSQEFTSKTSNDSNETTYN CCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEE VTADISFENISTITASQPPPPPPPAGNKSVTEGCCFSNTAGDLIFTGNSHSLSFKNISLT EEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEEE GKGAAISNTADTKTTTLSGFSHLTFSSSPSSTVATGKGAIFCQGSSLNISNNTLVSFTDN CCCCEECCCCCCCEEEECCCEEEEECCCCCCEEECCCCEEEECCCEEEECCCEEEEEECC HSTENGGAIGYETTPTPPTPPPTPPSSPNPSPQATHLSSVSSGTPVQSAQATVTFQGNTE CCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEECCCEE VLFSGNSSGKNGGAIYAQNLAITSSSGTILFTNNTAKEKGGAIAIANSGTLSLSAEGGNI EEEECCCCCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCEEEEECCCEEEEEECCCEE IFQGNIAKDGSNAIDLGTSAKITQLRATQGSSIYFYDPITGNGANVTDKLVINNPDTISG EEECCCCCCCCCEEECCCCCEEEEEEECCCCEEEEECCCCCCCCCCEEEEEECCCCEECC GGGSSGPGGAIRSSAAQPSPKTYTGTVVFSGKNNNTKALTNVTSLTQPVELAAGTLVLED CCCCCCCCCHHHCCCCCCCCCEEEEEEEEECCCCCCEEEEEHHHHCCCHHHCCCEEEEEC GALFDTKSFTQKDDTSKVLLEQNSQLQASENIDLKNLWVGVSDPTTKRVAGVSTSGSGSI CCEECCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHEEEECCCCCCHHEEEECCCCCCEE TISGPITLALSDPKFYENPDLAKDLNQEFIKIAAAKGTITLNNQSDPVQQDIGDHLGYQG EEECCEEEEECCCCCCCCCCHHHHHHHHHEEEEEECCEEEECCCCCCHHHHHHHHCCCCC VWKLTWADSPSGKEKVATLDWKPQGYIPPSGDTHSQTSLVPNSLWVMAFDVAAIQRLIEE EEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHH EAKSATGGDIWGAGLSNFLQGKKTDKNRKFRNISSGYAAGISSKSLHDFKFSFSFSQLFG HHHCCCCCCEEHHHHHHHHCCCCCCCCCHHHCCCCCHHCCCCCCCCEEEEEEEEHHHHHH RAKDYAGARIHEKILSGSLYAQYDTKLLPILKFLSGTSVFRPSFLTQVSEDFPISFQAQF HHHHCCCHHHHHHHHCCCEEEECCCHHHHHHHHHCCCCCCCCHHHHHHCCCCCEEEEEEE GYFYGDNTMKIKYPDTTQANSSWENHCCSGDIGASITIPMQSKDGLIQKASPFAKLQSIY EEEECCCEEEEECCCCCCCCCCHHHCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHH VYQKGFQEKGLRRRAFDHTYLINISIPLGFKVHGESSSKDLYYEVSAAYVGDVYRHNPQN EEHHCHHHCCHHHHCCCCEEEEEEEECCEEEECCCCCCCEEEEEEEHHHHHHHHHCCCCC TTTPIVAGVVATPWLTTATYLQRHAARFQGSGSYALTSYIHLFAQGSVELRKLASSYHAN CCCCEEEHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHEEHHHHHCCCHHHHHHHHHHCCC AGSSIHF CCCCCCC >Mature Secondary Structure MKLSSCGFLLTSSLLSTCLIFADAASPTPKATTDLSTGFDGSSQEFTSKTSNDSNETTYN CCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEE VTADISFENISTITASQPPPPPPPAGNKSVTEGCCFSNTAGDLIFTGNSHSLSFKNISLT EEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEEE GKGAAISNTADTKTTTLSGFSHLTFSSSPSSTVATGKGAIFCQGSSLNISNNTLVSFTDN CCCCEECCCCCCCEEEECCCEEEEECCCCCCEEECCCCEEEECCCEEEECCCEEEEEECC HSTENGGAIGYETTPTPPTPPPTPPSSPNPSPQATHLSSVSSGTPVQSAQATVTFQGNTE CCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEECCCEE VLFSGNSSGKNGGAIYAQNLAITSSSGTILFTNNTAKEKGGAIAIANSGTLSLSAEGGNI EEEECCCCCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCEEEEECCCEEEEEECCCEE IFQGNIAKDGSNAIDLGTSAKITQLRATQGSSIYFYDPITGNGANVTDKLVINNPDTISG EEECCCCCCCCCEEECCCCCEEEEEEECCCCEEEEECCCCCCCCCCEEEEEECCCCEECC GGGSSGPGGAIRSSAAQPSPKTYTGTVVFSGKNNNTKALTNVTSLTQPVELAAGTLVLED CCCCCCCCCHHHCCCCCCCCCEEEEEEEEECCCCCCEEEEEHHHHCCCHHHCCCEEEEEC GALFDTKSFTQKDDTSKVLLEQNSQLQASENIDLKNLWVGVSDPTTKRVAGVSTSGSGSI CCEECCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHEEEECCCCCCHHEEEECCCCCCEE TISGPITLALSDPKFYENPDLAKDLNQEFIKIAAAKGTITLNNQSDPVQQDIGDHLGYQG EEECCEEEEECCCCCCCCCCHHHHHHHHHEEEEEECCEEEECCCCCCHHHHHHHHCCCCC VWKLTWADSPSGKEKVATLDWKPQGYIPPSGDTHSQTSLVPNSLWVMAFDVAAIQRLIEE EEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHH EAKSATGGDIWGAGLSNFLQGKKTDKNRKFRNISSGYAAGISSKSLHDFKFSFSFSQLFG HHHCCCCCCEEHHHHHHHHCCCCCCCCCHHHCCCCCHHCCCCCCCCEEEEEEEEHHHHHH RAKDYAGARIHEKILSGSLYAQYDTKLLPILKFLSGTSVFRPSFLTQVSEDFPISFQAQF HHHHCCCHHHHHHHHCCCEEEECCCHHHHHHHHHCCCCCCCCHHHHHHCCCCCEEEEEEE GYFYGDNTMKIKYPDTTQANSSWENHCCSGDIGASITIPMQSKDGLIQKASPFAKLQSIY EEEECCCEEEEECCCCCCCCCCHHHCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHH VYQKGFQEKGLRRRAFDHTYLINISIPLGFKVHGESSSKDLYYEVSAAYVGDVYRHNPQN EEHHCHHHCCHHHHCCCCEEEEEEEECCEEEECCCCCCCEEEEEEEHHHHHHHHHCCCCC TTTPIVAGVVATPWLTTATYLQRHAARFQGSGSYALTSYIHLFAQGSVELRKLASSYHAN CCCCEEEHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHEEHHHHHCCCHHHHHHHHHHCCC AGSSIHF CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10539856; 10192388; 10684935; 10871362 [H]