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The map label for this gene is ydhO

Identifier: 89898282

GI number: 89898282

Start: 561861

End: 562712

Strand: Direct

Name: ydhO

Synonym: CF0475

Alternate gene names: NA

Gene position: 561861-562712 (Clockwise)

Preceding gene: 89898281

Following gene: 89898285

Centisome position: 48.18

GC content: 38.03

Gene sequence:

>852_bases
ATGAAACATTATCAACTTTATGCGCCTGTTTCTGACCTCTCATCTATACATGGTGATTTAGAAACACAGCTATTATTTGG
AGAGCGCCTACTTTCTGGTAAAGATGCCCACTATGCCTACTCTCAATTAGTCTACAATGGAGATTTTTGGCGTCCCTACC
CAGTCAAAAACATCTCATCAGAAGCCTCATTTTTTCACCTACTTCAACACATTTCACCTAACGCTGCAGTCAAATCTTTT
GATGCTTTTTTAGAACCCTGGCATATTCCCCTACCCTATGGCACGCCACTAACCATAGATTCTCGGGGAAAGGTCTTCTT
GCCTGAAGAAGTTAGAAAAGGGATCAGATTCCCTCTTGATAAGGAAGAGCCTTTTTGTAAATTGACTCATGTGCGTTTTT
TGAATACTCCCCTTTCTATGGATCTTTTACTTAAAGAATCCGAGAATTTTTTAGATATCCCTTATGTATGGGGAGGACGT
TGTGTTCATCGCTCTTTAATAGATTGTGGTTTAGATTGTTCTGGTTTTATAAATATTTTGTTTCAAGCTCATGGATTAAG
CATCCCTAGAAATGCAAGAGATCAATACAAAGATTGTGATTTAGTGGATAGTTTTGGAAGTCTTCCTCCAGGAGGATTTG
TCTTTTTACAAAATGATCAGGGGTTGCGAATTTCTCATGTGATGTTGAAGAAAAGTTCAACATGTTTAATTCACGCAGCT
CAAACTCTGGGGAAGATCGTTCTTTTTTCTTTGGGAAGAGATATAGTATTTAGTAAAAACAGTTTTCGGGCTCAGAATGC
TCAAGGAAAAGCATTTTTTGGAGTGCCAAGAAAAAGAAAAGTCTTCTTCTAG

Upstream 100 bases:

>100_bases
CCTGATGAGGTTTTCCAAAGTATCTTGGCTTGTATAGAAGATTAAGCTTTGCTCTCCTTTTAGGCGTTTTAAAAGCAATT
TTTTGATGTAGATAAGAAAG

Downstream 100 bases:

>100_bases
ACGAAAGACAAACTAGATTTAAAATATTTTCTAGATTCAGAAAATAAAAAAGCAAGCGAGTTGAACTTTGAAAAAAATTT
CGCTTGCTCTGGATAAAAGA

Product: polysaccharide hydrolase-invasin repeat-containing protein

Products: NA

Alternate protein names: Polysaccharide Hydrolase Invasin Repeat-Containing Protein; Nlp/P60 Family Protein; NLP/P60 Family Protein; Polysaccharide Hydrolase-Invasin Repeat-Containing Protein

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MKHYQLYAPVSDLSSIHGDLETQLLFGERLLSGKDAHYAYSQLVYNGDFWRPYPVKNISSEASFFHLLQHISPNAAVKSF
DAFLEPWHIPLPYGTPLTIDSRGKVFLPEEVRKGIRFPLDKEEPFCKLTHVRFLNTPLSMDLLLKESENFLDIPYVWGGR
CVHRSLIDCGLDCSGFINILFQAHGLSIPRNARDQYKDCDLVDSFGSLPPGGFVFLQNDQGLRISHVMLKKSSTCLIHAA
QTLGKIVLFSLGRDIVFSKNSFRAQNAQGKAFFGVPRKRKVFF

Sequences:

>Translated_283_residues
MKHYQLYAPVSDLSSIHGDLETQLLFGERLLSGKDAHYAYSQLVYNGDFWRPYPVKNISSEASFFHLLQHISPNAAVKSF
DAFLEPWHIPLPYGTPLTIDSRGKVFLPEEVRKGIRFPLDKEEPFCKLTHVRFLNTPLSMDLLLKESENFLDIPYVWGGR
CVHRSLIDCGLDCSGFINILFQAHGLSIPRNARDQYKDCDLVDSFGSLPPGGFVFLQNDQGLRISHVMLKKSSTCLIHAA
QTLGKIVLFSLGRDIVFSKNSFRAQNAQGKAFFGVPRKRKVFF
>Mature_283_residues
MKHYQLYAPVSDLSSIHGDLETQLLFGERLLSGKDAHYAYSQLVYNGDFWRPYPVKNISSEASFFHLLQHISPNAAVKSF
DAFLEPWHIPLPYGTPLTIDSRGKVFLPEEVRKGIRFPLDKEEPFCKLTHVRFLNTPLSMDLLLKESENFLDIPYVWGGR
CVHRSLIDCGLDCSGFINILFQAHGLSIPRNARDQYKDCDLVDSFGSLPPGGFVFLQNDQGLRISHVMLKKSSTCLIHAA
QTLGKIVLFSLGRDIVFSKNSFRAQNAQGKAFFGVPRKRKVFF

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32100; Mature: 32100

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHYQLYAPVSDLSSIHGDLETQLLFGERLLSGKDAHYAYSQLVYNGDFWRPYPVKNISS
CCCEEEECCHHHHHHHCCCHHHHHHHHHHHHCCCCCHHEEEHEEECCCCCCCCCCCCCCC
EASFFHLLQHISPNAAVKSFDAFLEPWHIPLPYGTPLTIDSRGKVFLPEEVRKGIRFPLD
HHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEECCHHHHCCCCCCCC
KEEPFCKLTHVRFLNTPLSMDLLLKESENFLDIPYVWGGRCVHRSLIDCGLDCSGFINIL
CCCCCEEEEEEEEECCCCCEEEEEECCCCEEECCCCCCCHHHHHHHHHCCCCHHHHHHHH
FQAHGLSIPRNARDQYKDCDLVDSFGSLPPGGFVFLQNDQGLRISHVMLKKSSTCLIHAA
HHHCCCCCCCCCHHHHCCCCHHHHHCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEEH
QTLGKIVLFSLGRDIVFSKNSFRAQNAQGKAFFGVPRKRKVFF
HHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEECCCCCCCCCC
>Mature Secondary Structure
MKHYQLYAPVSDLSSIHGDLETQLLFGERLLSGKDAHYAYSQLVYNGDFWRPYPVKNISS
CCCEEEECCHHHHHHHCCCHHHHHHHHHHHHCCCCCHHEEEHEEECCCCCCCCCCCCCCC
EASFFHLLQHISPNAAVKSFDAFLEPWHIPLPYGTPLTIDSRGKVFLPEEVRKGIRFPLD
HHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEECCHHHHCCCCCCCC
KEEPFCKLTHVRFLNTPLSMDLLLKESENFLDIPYVWGGRCVHRSLIDCGLDCSGFINIL
CCCCCEEEEEEEEECCCCCEEEEEECCCCEEECCCCCCCHHHHHHHHHCCCCHHHHHHHH
FQAHGLSIPRNARDQYKDCDLVDSFGSLPPGGFVFLQNDQGLRISHVMLKKSSTCLIHAA
HHHCCCCCCCCCHHHHCCCCHHHHHCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEEH
QTLGKIVLFSLGRDIVFSKNSFRAQNAQGKAFFGVPRKRKVFF
HHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA