Click here to switch to the map view.

The map label for this gene is rpmE2

Identifier: 89898157

GI number: 89898157

Start: 413729

End: 414049

Strand: Direct

Name: rpmE2

Synonym: CF0350

Alternate gene names: 89898157

Gene position: 413729-414049 (Clockwise)

Preceding gene: 89898154

Following gene: 89898158

Centisome position: 35.48

GC content: 39.25

Gene sequence:

>321_bases
ATGAAAAAGAACACTCATCTTGACTACAAGCAAGTTTTATTCGTAGATTCTTCTACGGGATATAAGTTTGTTTGCGGATC
TACATATCAAAGCGATAAGACGGAAGTTTTTGAAGGACAAGAATATCCTGTGTGCTACGTCAGTGTGTCTTCTTCTTCAC
ATCCTTTCTTCACAGGAAGTAAGAGATTAGTGGATGCCGAAGGCCGGGTAGATAAGTTCTTAAAACGTTACAGTAATGTA
AAGCCTGCGCAACCTGTTCAAGTTGCTGAAGAACCTGTTGCCAAAGGCAAGAAAAAGCCTTCACTAAAGAAAAAGAAATA
G

Upstream 100 bases:

>100_bases
TTTTCTTGCTTTTTCATAAGGTATTTCTGTACACTTTTCCTTTAGTATTTCATAATGTGTTTCCCACATACCATAAGATG
GTGATTTTGGAGTTGTCAAT

Downstream 100 bases:

>100_bases
TCTTCTCTTTTTAAGTTTTAATGTTTTTATAAACACGTTGTCATTCTCTATTTTAATTGGGTATTGAAGCGTGTTTTTTT
GTGTAAAGCTTTAATCTGAA

Product: 50S ribosomal protein L31 type B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MKKNTHLDYKQVLFVDSSTGYKFVCGSTYQSDKTEVFEGQEYPVCYVSVSSSSHPFFTGSKRLVDAEGRVDKFLKRYSNV
KPAQPVQVAEEPVAKGKKKPSLKKKK

Sequences:

>Translated_106_residues
MKKNTHLDYKQVLFVDSSTGYKFVCGSTYQSDKTEVFEGQEYPVCYVSVSSSSHPFFTGSKRLVDAEGRVDKFLKRYSNV
KPAQPVQVAEEPVAKGKKKPSLKKKK
>Mature_106_residues
MKKNTHLDYKQVLFVDSSTGYKFVCGSTYQSDKTEVFEGQEYPVCYVSVSSSSHPFFTGSKRLVDAEGRVDKFLKRYSNV
KPAQPVQVAEEPVAKGKKKPSLKKKK

Specific function: Unknown

COG id: COG0254

COG function: function code J; Ribosomal protein L31

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L31P family. Type B subfamily

Homologues:

Organism=Escherichia coli, GI2367109, Length=77, Percent_Identity=42.8571428571429, Blast_Score=68, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL31B_CHLFF (Q255B6)

Other databases:

- EMBL:   AP006861
- RefSeq:   YP_515267.1
- ProteinModelPortal:   Q255B6
- SMR:   Q255B6
- STRING:   Q255B6
- GeneID:   3958362
- GenomeReviews:   AP006861_GR
- KEGG:   cfe:CF0350
- eggNOG:   COG0254
- HOGENOM:   HBG610087
- OMA:   QFLTRST
- ProtClustDB:   PRK01678
- BioCyc:   CFEL264202:CF0350-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00502
- InterPro:   IPR002150
- PRINTS:   PR01249
- TIGRFAMs:   TIGR00105

Pfam domain/function: PF01197 Ribosomal_L31

EC number: NA

Molecular weight: Translated: 11973; Mature: 11973

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: PS01143 RIBOSOMAL_L31

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNTHLDYKQVLFVDSSTGYKFVCGSTYQSDKTEVFEGQEYPVCYVSVSSSSHPFFTGS
CCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCEEECCCCCCEEEEEECCCCCCEECCC
KRLVDAEGRVDKFLKRYSNVKPAQPVQVAEEPVAKGKKKPSLKKKK
CEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKKNTHLDYKQVLFVDSSTGYKFVCGSTYQSDKTEVFEGQEYPVCYVSVSSSSHPFFTGS
CCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCEEECCCCCCEEEEEECCCCCCEECCC
KRLVDAEGRVDKFLKRYSNVKPAQPVQVAEEPVAKGKKKPSLKKKK
CEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA