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The map label for this gene is ybeB [H]

Identifier: 89897969

GI number: 89897969

Start: 193995

End: 194354

Strand: Direct

Name: ybeB [H]

Synonym: CF0162

Alternate gene names: 89897969

Gene position: 193995-194354 (Clockwise)

Preceding gene: 89897968

Following gene: 89897970

Centisome position: 16.63

GC content: 35.56

Gene sequence:

>360_bases
ATGGAATTATTTTGCTTTAATTTATTAAAAGTAATTGCCAAAGTTATTGATAACAAAAAAGGCAATAATCCTGTTGTCTT
GGATGTTCGCGCCATTTCTCAGCTTACAGACTATTTTATTTTTGCTGAAGGAAATATTGGTGTACATGTAAAAGCCTTGG
CAGACACTATCGTACAGGAATTAAAAGAGCATAATATTGCTCCTTTACATGTAGAGGGGTTAAGCCATGGTGACTGGGTA
GTTATAGATTACGGATTTATCGTCATTCATCTATTTGTCTCATCCGTTAGAGAACAATATCGACTGGAAGAGCTGTGGAA
GGACGGTTCCATTATTACATCTAAGCTTCTAGCTTCTTAA

Upstream 100 bases:

>100_bases
CTTAGAAGAATGGCTAGAAAGTATTATTGGAATATTATTTAACATAAGAAAAAAAGCTCGACCTTATCCTAGATAATCGA
GTATTCTTTTGCCAGTTTCT

Downstream 100 bases:

>100_bases
CGGGGTAGAATAACTTTATGAATAAAAAACGTGTAGTAGTCACGGGATTGGGAGTAGTTTCCTGCTTAGGCAATGAAGTA
GACACCTTTTATGATAATCT

Product: chloroplast development gene iojap superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MELFCFNLLKVIAKVIDNKKGNNPVVLDVRAISQLTDYFIFAEGNIGVHVKALADTIVQELKEHNIAPLHVEGLSHGDWV
VIDYGFIVIHLFVSSVREQYRLEELWKDGSIITSKLLAS

Sequences:

>Translated_119_residues
MELFCFNLLKVIAKVIDNKKGNNPVVLDVRAISQLTDYFIFAEGNIGVHVKALADTIVQELKEHNIAPLHVEGLSHGDWV
VIDYGFIVIHLFVSSVREQYRLEELWKDGSIITSKLLAS
>Mature_119_residues
MELFCFNLLKVIAKVIDNKKGNNPVVLDVRAISQLTDYFIFAEGNIGVHVKALADTIVQELKEHNIAPLHVEGLSHGDWV
VIDYGFIVIHLFVSSVREQYRLEELWKDGSIITSKLLAS

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Iojap family [H]

Homologues:

Organism=Escherichia coli, GI87081768, Length=91, Percent_Identity=39.5604395604396, Blast_Score=79, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004394 [H]

Pfam domain/function: PF02410 DUF143 [H]

EC number: NA

Molecular weight: Translated: 13419; Mature: 13419

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELFCFNLLKVIAKVIDNKKGNNPVVLDVRAISQLTDYFIFAEGNIGVHVKALADTIVQE
CCHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHEEEEECCCCCEEHHHHHHHHHHH
LKEHNIAPLHVEGLSHGDWVVIDYGFIVIHLFVSSVREQYRLEELWKDGSIITSKLLAS
HHHCCCCEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
>Mature Secondary Structure
MELFCFNLLKVIAKVIDNKKGNNPVVLDVRAISQLTDYFIFAEGNIGVHVKALADTIVQE
CCHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHEEEEECCCCCEEHHHHHHHHHHH
LKEHNIAPLHVEGLSHGDWVVIDYGFIVIHLFVSSVREQYRLEELWKDGSIITSKLLAS
HHHCCCCEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]