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The map label for this gene is sdhC

Identifier: 89897851

GI number: 89897851

Start: 44092

End: 44985

Strand: Direct

Name: sdhC

Synonym: CF0044

Alternate gene names: NA

Gene position: 44092-44985 (Clockwise)

Preceding gene: 89897850

Following gene: 89897852

Centisome position: 3.78

GC content: 38.7

Gene sequence:

>894_bases
ATGAATGAAAGGGAAACATGTTCTGAACTATCTCAGAAGCCATGGAAGTACTACACTAGCTTTGCTTTACGTTGTGTTCA
TTCTTTAGCAGGAGTTGCATTTACGTTGTTTCTCTGCGAGCATATATTTACTAATATGCTTGCTTCTTCTTATTTTAAAG
AGGGAGGGGGATTTGTTCGTTTGGTGAGCAGGTTTCATCAGATTCCTGGTCTTCAGATCATAGAAATCGTTTTTTTAGCC
TTACCTTTTATTTTTCATGCTATCATAGGAATTGCTTATCTCTTCCAGTCAAAATGTAACTCGGGAGTTTTTGATGGCAG
CAAGCCTTCGTTAAATTATGCGAGAAACATTGCTTATACCTGGCAGAGAAGAACAGCATGGATTTTACTTTTTGGGATTG
TTTTTCACGTTGTTCAGTTTCGTTTTCTTCGTTATCCCTTTCATGTAGAGCTGCATGGGCAGACTTATTATGCTGTGGAT
ATCAATGCCGCTCGATATACAGCGATAGTTCGTGGTACTAAGGGATTTTTCACTATAAATTTCTCGGCTCCACAAACAGC
AACGATCCGTTTAGATAAAGAGGATTTTGAAGGCGACGCTATTTCTAAAATATCAGAAAACAAAGAATATCTTCTTACAT
CTAATGTAGGGACTGCTTTTCTTTATATTGTTCGGGATTCTTTAGGATCCCTATGGATGGCGATTTTCTATACTTTATTA
GTGATCGCCGCAGCATTTCATGGATTTAATGGTTTCTGGACATTTTGTTCCCGGTGGGGAGTTGTGATCTCTTTACGTTC
TCAAGCTCTTTTACGTAATTTGTGTTATTGTGCCATGGTTGTAGTTGCGGCCATGGGCATTAGTGTGATCTGGAATTTGT
ATAGCGTGGCATAA

Upstream 100 bases:

>100_bases
GGGTAGCCTGTCTTTGATTGTCTAGTAAAAATCACTTCACATAATTCTGATGAAGCTTTTATGGTCTCTAGAAAAAGGGT
TTGTGAAATAAAGGCTTACG

Downstream 100 bases:

>100_bases
GAGTATGGAAGCACAGGGTTGTAGGGTTATTGTCGTTGGCGGAGGGTTAGCAGGATTATCAGCAGCCATGAAGTTGGCAG
ATTATGGTATCGTTGTTGAT

Product: subunit of succinate dehydrogenase

Products: fumarate; reduced acceptor

Alternate protein names: Succinate Dehydrogenase Cytochrome B; Succinate Dehydrogenase; Subunit Of Succinate Dehydrogenase; Succinate Dehydrogenase Subunit C; Succinate Dehydrogenase Cytochrome B-; Succinate Dehydrogenase Subunit

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MNERETCSELSQKPWKYYTSFALRCVHSLAGVAFTLFLCEHIFTNMLASSYFKEGGGFVRLVSRFHQIPGLQIIEIVFLA
LPFIFHAIIGIAYLFQSKCNSGVFDGSKPSLNYARNIAYTWQRRTAWILLFGIVFHVVQFRFLRYPFHVELHGQTYYAVD
INAARYTAIVRGTKGFFTINFSAPQTATIRLDKEDFEGDAISKISENKEYLLTSNVGTAFLYIVRDSLGSLWMAIFYTLL
VIAAAFHGFNGFWTFCSRWGVVISLRSQALLRNLCYCAMVVVAAMGISVIWNLYSVA

Sequences:

>Translated_297_residues
MNERETCSELSQKPWKYYTSFALRCVHSLAGVAFTLFLCEHIFTNMLASSYFKEGGGFVRLVSRFHQIPGLQIIEIVFLA
LPFIFHAIIGIAYLFQSKCNSGVFDGSKPSLNYARNIAYTWQRRTAWILLFGIVFHVVQFRFLRYPFHVELHGQTYYAVD
INAARYTAIVRGTKGFFTINFSAPQTATIRLDKEDFEGDAISKISENKEYLLTSNVGTAFLYIVRDSLGSLWMAIFYTLL
VIAAAFHGFNGFWTFCSRWGVVISLRSQALLRNLCYCAMVVVAAMGISVIWNLYSVA
>Mature_297_residues
MNERETCSELSQKPWKYYTSFALRCVHSLAGVAFTLFLCEHIFTNMLASSYFKEGGGFVRLVSRFHQIPGLQIIEIVFLA
LPFIFHAIIGIAYLFQSKCNSGVFDGSKPSLNYARNIAYTWQRRTAWILLFGIVFHVVQFRFLRYPFHVELHGQTYYAVD
INAARYTAIVRGTKGFFTINFSAPQTATIRLDKEDFEGDAISKISENKEYLLTSNVGTAFLYIVRDSLGSLWMAIFYTLL
VIAAAFHGFNGFWTFCSRWGVVISLRSQALLRNLCYCAMVVVAAMGISVIWNLYSVA

Specific function: Unknown

COG id: COG2009

COG function: function code C; Succinate dehydrogenase/fumarate reductase, cytochrome b subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.3.99.1

Molecular weight: Translated: 33802; Mature: 33802

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNERETCSELSQKPWKYYTSFALRCVHSLAGVAFTLFLCEHIFTNMLASSYFKEGGGFVR
CCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LVSRFHQIPGLQIIEIVFLALPFIFHAIIGIAYLFQSKCNSGVFDGSKPSLNYARNIAYT
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
WQRRTAWILLFGIVFHVVQFRFLRYPFHVELHGQTYYAVDINAARYTAIVRGTKGFFTIN
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEECHHHEEHEEECCCCEEEEE
FSAPQTATIRLDKEDFEGDAISKISENKEYLLTSNVGTAFLYIVRDSLGSLWMAIFYTLL
ECCCCEEEEEECCCCCCCHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
VIAAAFHGFNGFWTFCSRWGVVISLRSQALLRNLCYCAMVVVAAMGISVIWNLYSVA
HHHHHHHCCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNERETCSELSQKPWKYYTSFALRCVHSLAGVAFTLFLCEHIFTNMLASSYFKEGGGFVR
CCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LVSRFHQIPGLQIIEIVFLALPFIFHAIIGIAYLFQSKCNSGVFDGSKPSLNYARNIAYT
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
WQRRTAWILLFGIVFHVVQFRFLRYPFHVELHGQTYYAVDINAARYTAIVRGTKGFFTIN
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEECHHHEEHEEECCCCEEEEE
FSAPQTATIRLDKEDFEGDAISKISENKEYLLTSNVGTAFLYIVRDSLGSLWMAIFYTLL
ECCCCEEEEEECCCCCCCHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
VIAAAFHGFNGFWTFCSRWGVVISLRSQALLRNLCYCAMVVVAAMGISVIWNLYSVA
HHHHHHHCCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA