| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89257056
Identifier: 89257056
GI number: 89257056
Start: 1725154
End: 1727997
Strand: Reverse
Name: 89257056
Synonym: FTL_1793
Alternate gene names: NA
Gene position: 1727997-1725154 (Counterclockwise)
Preceding gene: 89257057
Following gene: 89257054
Centisome position: 91.14
GC content: 31.93
Gene sequence:
>2844_bases ATGAGAAAACTTTTTATAAATCTTATATTGCTTACTTTAATATTTCCGTTAATTTTGCAGGCTGAGCCACTATCTGATTC AGATTCTAGCAGTTCTAAGTCACTACTACCGAATAGAACAATTGTAGGATTTCTTGATATTCGTACTCCAGGTTCAACAA CAAGGGTTGATATGCAAAAGGTTAAAAAAGACGGCTACAATGTGATGATAGTTGCCTATGGAGAGGTATATGATGATAAT ATAGGGTTTTATACTAATTCTGTAACTTCTACACAGACTATAATAGACAAAATTCGTGACGCTAAGAAAGCTGGTATGAA AGTACTATTAGCTGTTGGTGGAAGTCCTAATACTTTTCATCCTGGGGTTAAGCAAGGTGCTCCAGATCCGAAAATATTTG GTAATGATTTAACTGATGCGCAAATAAAATCATTAGCTAATAATATAGTTAGCTTTTTAAATAAAAATGATATTGACGGA ATTTTATACTGTATTAAAAAATTTACATCACCTGAATTTATTACAAAACTTTCTGCGGATATAAAAAAGATTAATGCAAA AATTATAATTGCTGCTGAACCAGAAGTTAATAATTATAAATTAGTAACAACAGGGTTAAGTAATGATTATGATAAAGCTA TAGAAGATGGTAATATAGATTATCTTTTTATACAAGAGTATAATACATATCCTGAGTATGATCCAAATTTTATTTCTGAA AGTTATCCAAAAATTATTGAAAGTGTAAATATTCCTATTAAAACAAAAATTTTGATAGAAGAACCAACAAATGCTGTTTC TGGCGGAACAAATACTATATATCACCCACAAGGAAATGCTACAAAATCATTATCGACTGAGCAAGCAATAAAACTATTAT TACCGCAACTTGAGAAGCTGAAATTTAAACCAAGGTTTGCTGGTGTTGCGGGGTGGTCATTAAATACCGATTATGCTGCT GATCTGTATGGAGATTCTTCACATAATGCCGGAGCCTTTGCAAAGGGACTTAGTGCATGCATTTATAAAAATACTTGTAC AGAAATAGATAATCAAATACATGGGCCAGTTGTTGCTGGGATTTTACCACTATGGGGTAAAAGTAGTTCTTATAATATTT CTGGTCAGCAGATAAATACTATACCTATAAGTATATCGATGCCAAAAGATAAAGAGTATTGTGATTATAACCCCAATGTT TGCAAATATAATGTAATTATAGCGGCATATTTAACTTATACTAGTAGCAAAGGATTTGAACTATCTTTTAATGAAGAGAA TGGTAGTTCTAAGAAGATATATTCTCCAGAAGAGTTAAAAGCCTTCATAACTTATATGAATTCAAAAGGAAAGCATACTA TTGTTTCTATTGGTGGCAAATATTCTCATATTAACTGGGAGACAATAAATTTTAGTGATCTTGTAAAAATTGTTCAAGAA TATGGTTTTAATGGCATAAATTTTGATTTAAGTAGTTCTGATATGCCTAAGAATGATAAGGTAGCAAAAATAGCTGCTGA TAAAATAAATAAATTAATCACAGCATTGAGACAAAATAACCATGGTTTTTGGTTAACTTTCTCTCCTGAATGGCACTATA TAGTTGCACCCTTAGCTAAAAATGACAAAGATAATATCTATGTCAATCATAATTATATTGAGCTGTTAGATAGTCTTGGT ATGAATAAAATAGACTATATTTGGCTTAATACATTTGCAGATAAACCCTATGATGGAATCTTGAGTTTTTACAAAGATAA GGATGGCGAGCACATAAAGATTACTCCTGCTGATGGTTATGCTAAGTTTCTGGCATCACTTGCGTGGGCTTTGACGACGC GAGCAGGATATGATGCAAATATGCCAAAATATGATGAAATTGATAAACCTTTACATATTCCTGCCAATAAGCTAGTCTTA ATGATTCCTGCTACCAAAGGTACTACACATAGCGACATGGTATATGTGCTGTCAGAAAAAGATATCAAAGAGGTAGTTTC TTTGATGAAAGGAAATAATGCTTCTTTTGCAGGTTTTGCAGTTTGGAGTATCGATTTTGATGCAACTAATATTAATAATG GTGATTTGGGTAATGACTATAGTCATAAGCCTTGGAGTACAACAGCAGCAATTTCAGATATTAGTTTACCACCTATTGTT TCACAATTAAAAGATCAGATAAAGCAAGAAACAAAAGCTACATCACCAATACAAGAACAGGAGCAAAGTATAGATACTGG AATTATAAACTATCCTGATAAAATTGGCGCTTATAATGTTGATACTATCATAAATTTCCAAGGTAAAAAATATAAGTGCA AATCTAATTTAGAAGTTAAACTTTGTAATGACAAAGGATACATTCCAAATGGACTATATGGTTATCTTGCTTGGGATGAG ATTGATAGCGCTAAACAAACTAAAGTAAAACGTAAACAACGTAAGCTTGCTGTTGGTGAAATAGTTAAATACCCAAAATT TATTGGAAATTATAATGTTGGACAAATTGTTATTGCTGGAGATAGAAAATTTGAATGTCAAAAGCAAGAGTTATGTAATG ATAAATCATACCGACCTATAGGTAAAAGTGGATATCTTGCTTGGAGTGATATAACTGATGATGTAGCTCATTTAGCAACT GAAGCTAAACAAGTTAAACCAAAAGGTGCAGAGTATATTTATCCATTTGGTATTGAGGATTATAGTGCTGGTACGGTAGT TGCTATTGGTCAAGAGCTATATCGTTGTAAGGTTGGTCCTGAATCTAGCTTGTGTAATAGTGAAGCTTATAAACCAACTG GTAAGTATGGTACAGATGCTTGGACAAAAATAGATAGTAAATAA
Upstream 100 bases:
>100_bases AATATAAATTAAAATGCCTCAAATTTAGAGTTATTTATTATGATATCAGGATAAAATTATTTATAATTCATAAAATATAA TATTTTAAATTCTAGTATAA
Downstream 100 bases:
>100_bases AGATATTTGTGTTTAATTATTTTACAGAGTCAATTAATTTTTTTAGTTCGCCAGATTCATTCATTTCCATAATTATATCG CAGCCGCCTATTAGTTCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 947; Mature: 947
Protein sequence:
>947_residues MRKLFINLILLTLIFPLILQAEPLSDSDSSSSKSLLPNRTIVGFLDIRTPGSTTRVDMQKVKKDGYNVMIVAYGEVYDDN IGFYTNSVTSTQTIIDKIRDAKKAGMKVLLAVGGSPNTFHPGVKQGAPDPKIFGNDLTDAQIKSLANNIVSFLNKNDIDG ILYCIKKFTSPEFITKLSADIKKINAKIIIAAEPEVNNYKLVTTGLSNDYDKAIEDGNIDYLFIQEYNTYPEYDPNFISE SYPKIIESVNIPIKTKILIEEPTNAVSGGTNTIYHPQGNATKSLSTEQAIKLLLPQLEKLKFKPRFAGVAGWSLNTDYAA DLYGDSSHNAGAFAKGLSACIYKNTCTEIDNQIHGPVVAGILPLWGKSSSYNISGQQINTIPISISMPKDKEYCDYNPNV CKYNVIIAAYLTYTSSKGFELSFNEENGSSKKIYSPEELKAFITYMNSKGKHTIVSIGGKYSHINWETINFSDLVKIVQE YGFNGINFDLSSSDMPKNDKVAKIAADKINKLITALRQNNHGFWLTFSPEWHYIVAPLAKNDKDNIYVNHNYIELLDSLG MNKIDYIWLNTFADKPYDGILSFYKDKDGEHIKITPADGYAKFLASLAWALTTRAGYDANMPKYDEIDKPLHIPANKLVL MIPATKGTTHSDMVYVLSEKDIKEVVSLMKGNNASFAGFAVWSIDFDATNINNGDLGNDYSHKPWSTTAAISDISLPPIV SQLKDQIKQETKATSPIQEQEQSIDTGIINYPDKIGAYNVDTIINFQGKKYKCKSNLEVKLCNDKGYIPNGLYGYLAWDE IDSAKQTKVKRKQRKLAVGEIVKYPKFIGNYNVGQIVIAGDRKFECQKQELCNDKSYRPIGKSGYLAWSDITDDVAHLAT EAKQVKPKGAEYIYPFGIEDYSAGTVVAIGQELYRCKVGPESSLCNSEAYKPTGKYGTDAWTKIDSK
Sequences:
>Translated_947_residues MRKLFINLILLTLIFPLILQAEPLSDSDSSSSKSLLPNRTIVGFLDIRTPGSTTRVDMQKVKKDGYNVMIVAYGEVYDDN IGFYTNSVTSTQTIIDKIRDAKKAGMKVLLAVGGSPNTFHPGVKQGAPDPKIFGNDLTDAQIKSLANNIVSFLNKNDIDG ILYCIKKFTSPEFITKLSADIKKINAKIIIAAEPEVNNYKLVTTGLSNDYDKAIEDGNIDYLFIQEYNTYPEYDPNFISE SYPKIIESVNIPIKTKILIEEPTNAVSGGTNTIYHPQGNATKSLSTEQAIKLLLPQLEKLKFKPRFAGVAGWSLNTDYAA DLYGDSSHNAGAFAKGLSACIYKNTCTEIDNQIHGPVVAGILPLWGKSSSYNISGQQINTIPISISMPKDKEYCDYNPNV CKYNVIIAAYLTYTSSKGFELSFNEENGSSKKIYSPEELKAFITYMNSKGKHTIVSIGGKYSHINWETINFSDLVKIVQE YGFNGINFDLSSSDMPKNDKVAKIAADKINKLITALRQNNHGFWLTFSPEWHYIVAPLAKNDKDNIYVNHNYIELLDSLG MNKIDYIWLNTFADKPYDGILSFYKDKDGEHIKITPADGYAKFLASLAWALTTRAGYDANMPKYDEIDKPLHIPANKLVL MIPATKGTTHSDMVYVLSEKDIKEVVSLMKGNNASFAGFAVWSIDFDATNINNGDLGNDYSHKPWSTTAAISDISLPPIV SQLKDQIKQETKATSPIQEQEQSIDTGIINYPDKIGAYNVDTIINFQGKKYKCKSNLEVKLCNDKGYIPNGLYGYLAWDE IDSAKQTKVKRKQRKLAVGEIVKYPKFIGNYNVGQIVIAGDRKFECQKQELCNDKSYRPIGKSGYLAWSDITDDVAHLAT EAKQVKPKGAEYIYPFGIEDYSAGTVVAIGQELYRCKVGPESSLCNSEAYKPTGKYGTDAWTKIDSK >Mature_947_residues MRKLFINLILLTLIFPLILQAEPLSDSDSSSSKSLLPNRTIVGFLDIRTPGSTTRVDMQKVKKDGYNVMIVAYGEVYDDN IGFYTNSVTSTQTIIDKIRDAKKAGMKVLLAVGGSPNTFHPGVKQGAPDPKIFGNDLTDAQIKSLANNIVSFLNKNDIDG ILYCIKKFTSPEFITKLSADIKKINAKIIIAAEPEVNNYKLVTTGLSNDYDKAIEDGNIDYLFIQEYNTYPEYDPNFISE SYPKIIESVNIPIKTKILIEEPTNAVSGGTNTIYHPQGNATKSLSTEQAIKLLLPQLEKLKFKPRFAGVAGWSLNTDYAA DLYGDSSHNAGAFAKGLSACIYKNTCTEIDNQIHGPVVAGILPLWGKSSSYNISGQQINTIPISISMPKDKEYCDYNPNV CKYNVIIAAYLTYTSSKGFELSFNEENGSSKKIYSPEELKAFITYMNSKGKHTIVSIGGKYSHINWETINFSDLVKIVQE YGFNGINFDLSSSDMPKNDKVAKIAADKINKLITALRQNNHGFWLTFSPEWHYIVAPLAKNDKDNIYVNHNYIELLDSLG MNKIDYIWLNTFADKPYDGILSFYKDKDGEHIKITPADGYAKFLASLAWALTTRAGYDANMPKYDEIDKPLHIPANKLVL MIPATKGTTHSDMVYVLSEKDIKEVVSLMKGNNASFAGFAVWSIDFDATNINNGDLGNDYSHKPWSTTAAISDISLPPIV SQLKDQIKQETKATSPIQEQEQSIDTGIINYPDKIGAYNVDTIINFQGKKYKCKSNLEVKLCNDKGYIPNGLYGYLAWDE IDSAKQTKVKRKQRKLAVGEIVKYPKFIGNYNVGQIVIAGDRKFECQKQELCNDKSYRPIGKSGYLAWSDITDDVAHLAT EAKQVKPKGAEYIYPFGIEDYSAGTVVAIGQELYRCKVGPESSLCNSEAYKPTGKYGTDAWTKIDSK
Specific function: Unknown
COG id: COG3469
COG function: function code G; Chitinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 105362; Mature: 105362
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKLFINLILLTLIFPLILQAEPLSDSDSSSSKSLLPNRTIVGFLDIRTPGSTTRVDMQK CHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHH VKKDGYNVMIVAYGEVYDDNIGFYTNSVTSTQTIIDKIRDAKKAGMKVLLAVGGSPNTFH HHHCCCEEEEEEECCEEECCCCEEECCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCC PGVKQGAPDPKIFGNDLTDAQIKSLANNIVSFLNKNDIDGILYCIKKFTSPEFITKLSAD CCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHH IKKINAKIIIAAEPEVNNYKLVTTGLSNDYDKAIEDGNIDYLFIQEYNTYPEYDPNFISE HHCCCEEEEEEECCCCCCEEEEEECCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCHHHH SYPKIIESVNIPIKTKILIEEPTNAVSGGTNTIYHPQGNATKSLSTEQAIKLLLPQLEKL HHHHHHHHCCCCEEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHC KFKPRFAGVAGWSLNTDYAADLYGDSSHNAGAFAKGLSACIYKNTCTEIDNQIHGPVVAG CCCCCCCCEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH ILPLWGKSSSYNISGQQINTIPISISMPKDKEYCDYNPNVCKYNVIIAAYLTYTSSKGFE HHHHCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCEE LSFNEENGSSKKIYSPEELKAFITYMNSKGKHTIVSIGGKYSHINWETINFSDLVKIVQE EEECCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCEEEEEEEEEECHHHHHHHHHH YGFNGINFDLSSSDMPKNDKVAKIAADKINKLITALRQNNHGFWLTFSPEWHYIVAPLAK HCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECC NDKDNIYVNHNYIELLDSLGMNKIDYIWLNTFADKPYDGILSFYKDKDGEHIKITPADGY CCCCCEEEECHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCEEEEECCCHH AKFLASLAWALTTRAGYDANMPKYDEIDKPLHIPANKLVLMIPATKGTTHSDMVYVLSEK HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCC DIKEVVSLMKGNNASFAGFAVWSIDFDATNINNGDLGNDYSHKPWSTTAAISDISLPPIV CHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHEECCCCCCHHH SQLKDQIKQETKATSPIQEQEQSIDTGIINYPDKIGAYNVDTIINFQGKKYKCKSNLEVK HHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHCCCEECCEEEEECCCEEEECCCCEEE LCNDKGYIPNGLYGYLAWDEIDSAKQTKVKRKQRKLAVGEIVKYPKFIGNYNVGQIVIAG EECCCCCCCCCEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC DRKFECQKQELCNDKSYRPIGKSGYLAWSDITDDVAHLATEAKQVKPKGAEYIYPFGIED CCCCCCCHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCEEEECCCCC YSAGTVVAIGQELYRCKVGPESSLCNSEAYKPTGKYGTDAWTKIDSK CCCCEEEEECHHHHEECCCCCCCCCCCCCCCCCCCCCCCHHEECCCC >Mature Secondary Structure MRKLFINLILLTLIFPLILQAEPLSDSDSSSSKSLLPNRTIVGFLDIRTPGSTTRVDMQK CHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHH VKKDGYNVMIVAYGEVYDDNIGFYTNSVTSTQTIIDKIRDAKKAGMKVLLAVGGSPNTFH HHHCCCEEEEEEECCEEECCCCEEECCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCC PGVKQGAPDPKIFGNDLTDAQIKSLANNIVSFLNKNDIDGILYCIKKFTSPEFITKLSAD CCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHH IKKINAKIIIAAEPEVNNYKLVTTGLSNDYDKAIEDGNIDYLFIQEYNTYPEYDPNFISE HHCCCEEEEEEECCCCCCEEEEEECCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCHHHH SYPKIIESVNIPIKTKILIEEPTNAVSGGTNTIYHPQGNATKSLSTEQAIKLLLPQLEKL HHHHHHHHCCCCEEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHC KFKPRFAGVAGWSLNTDYAADLYGDSSHNAGAFAKGLSACIYKNTCTEIDNQIHGPVVAG CCCCCCCCEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH ILPLWGKSSSYNISGQQINTIPISISMPKDKEYCDYNPNVCKYNVIIAAYLTYTSSKGFE HHHHCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCEE LSFNEENGSSKKIYSPEELKAFITYMNSKGKHTIVSIGGKYSHINWETINFSDLVKIVQE EEECCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCEEEEEEEEEECHHHHHHHHHH YGFNGINFDLSSSDMPKNDKVAKIAADKINKLITALRQNNHGFWLTFSPEWHYIVAPLAK HCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECC NDKDNIYVNHNYIELLDSLGMNKIDYIWLNTFADKPYDGILSFYKDKDGEHIKITPADGY CCCCCEEEECHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCEEEEECCCHH AKFLASLAWALTTRAGYDANMPKYDEIDKPLHIPANKLVLMIPATKGTTHSDMVYVLSEK HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCC DIKEVVSLMKGNNASFAGFAVWSIDFDATNINNGDLGNDYSHKPWSTTAAISDISLPPIV CHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHEECCCCCCHHH SQLKDQIKQETKATSPIQEQEQSIDTGIINYPDKIGAYNVDTIINFQGKKYKCKSNLEVK HHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHCCCEECCEEEEECCCEEEECCCCEEE LCNDKGYIPNGLYGYLAWDEIDSAKQTKVKRKQRKLAVGEIVKYPKFIGNYNVGQIVIAG EECCCCCCCCCEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC DRKFECQKQELCNDKSYRPIGKSGYLAWSDITDDVAHLATEAKQVKPKGAEYIYPFGIED CCCCCCCHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCEEEECCCCC YSAGTVVAIGQELYRCKVGPESSLCNSEAYKPTGKYGTDAWTKIDSK CCCCEEEEECHHHHEECCCCCCCCCCCCCCCCCCCCCCCHHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA