Click here to switch to the map view.

The map label for this gene is sdhD [C]

Identifier: 89257050

GI number: 89257050

Start: 1720199

End: 1720567

Strand: Reverse

Name: sdhD [C]

Synonym: FTL_1787

Alternate gene names: 89257050

Gene position: 1720567-1720199 (Counterclockwise)

Preceding gene: 89257051

Following gene: 89257049

Centisome position: 90.75

GC content: 34.42

Gene sequence:

>369_bases
ATGGGGGTGTTACTTATGGCTGTAATTTCATTAACTTCTTCTGGAATTAAAGACTTTTTCGTACAAAGAGTTACGGCTGT
AATTATTGCTGTATATTTTGGTTATCTTATCCTAGAAGCTTTGTATTTGTCGCATATAGGAGCTCTTAACTATGATAGTT
GGAGAGGTTTGTTTACCGATGGGATGTTTTTTAGAGTTGCTACGTTAATGGTGTACTTGGCGATGTTTTTTCATGCATGG
GTAGGTATCTGGATTATATGTGGCGATTATATTAAATTTGCTTGGGCTTTTGCGCTTGTGATGCTGAGCTTTGTTTTGGT
GTATATATTCTGCTTTTTTTGGTTATTTGCAGTTTTATTTTTCTATTAA

Upstream 100 bases:

>100_bases
TTAGACATATGATTATGGATATGGGCTTTGGTGAGAGTATGAAAGTGGCAAAAATCACTTCACTACTAGTTATCGTTTTG
GGTGTTTTATCAGCTATTTT

Downstream 100 bases:

>100_bases
GAGGTTGTTTTTATGAGTATAGCTACGCAAGAATTTGATGCTATTGTTATCGGTGCTGGTGGTGCGGGTTTAAGAGCTTC
TTTCCAGCTGTCACAGTCGG

Product: succinate dehydrogenase hydrophobic membrane anchor protein

Products: fumarate; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MGVLLMAVISLTSSGIKDFFVQRVTAVIIAVYFGYLILEALYLSHIGALNYDSWRGLFTDGMFFRVATLMVYLAMFFHAW
VGIWIICGDYIKFAWAFALVMLSFVLVYIFCFFWLFAVLFFY

Sequences:

>Translated_122_residues
MGVLLMAVISLTSSGIKDFFVQRVTAVIIAVYFGYLILEALYLSHIGALNYDSWRGLFTDGMFFRVATLMVYLAMFFHAW
VGIWIICGDYIKFAWAFALVMLSFVLVYIFCFFWLFAVLFFY
>Mature_121_residues
GVLLMAVISLTSSGIKDFFVQRVTAVIIAVYFGYLILEALYLSHIGALNYDSWRGLFTDGMFFRVATLMVYLAMFFHAWV
GIWIICGDYIKFAWAFALVMLSFVLVYIFCFFWLFAVLFFY

Specific function: This Is The Hydrophobic Component Of The Succinate Dehydrogenase Complex. It Is Suggested That It Is Required To Anchor The Catalytic Components To The Cytoplasmic Membrane. [C]

COG id: COG2142

COG function: function code C; Succinate dehydrogenase, hydrophobic anchor subunit

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.3.99.1

Molecular weight: Translated: 14161; Mature: 14030

Theoretical pI: Translated: 7.40; Mature: 7.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVLLMAVISLTSSGIKDFFVQRVTAVIIAVYFGYLILEALYLSHIGALNYDSWRGLFTD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
GMFFRVATLMVYLAMFFHAWVGIWIICGDYIKFAWAFALVMLSFVLVYIFCFFWLFAVLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FY
HC
>Mature Secondary Structure 
GVLLMAVISLTSSGIKDFFVQRVTAVIIAVYFGYLILEALYLSHIGALNYDSWRGLFTD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
GMFFRVATLMVYLAMFFHAWVGIWIICGDYIKFAWAFALVMLSFVLVYIFCFFWLFAVLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FY
HC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA