| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is yfgL [H]
Identifier: 89256993
GI number: 89256993
Start: 1654855
End: 1656225
Strand: Direct
Name: yfgL [H]
Synonym: FTL_1724
Alternate gene names: 89256993
Gene position: 1654855-1656225 (Clockwise)
Preceding gene: 89256992
Following gene: 89256994
Centisome position: 87.28
GC content: 34.87
Gene sequence:
>1371_bases ATGAAAAAACTATTATTTATTACGGCTCCTTTGCTGTTATCTGTATTAACAGCTAGTTGTTCTAAAAGTAACGTCCCGCC TCCTACTCCATTAGCTGAGAAACCTCCTAGAGAAACTTTTGTAAAAGTCATATGGAAAAGAAAAACAGGAAATGGTAATG GCAGCTTAGCGAATTACAATGTTGCCCCAGCTTATGCAAATGATACCGTATTTGTTCCTAATCAAAATGGTATGGCTTAT GCTCTAGCGATTACTAATGGCAAAATAATCTGGAAAAATGATACTGGTACAAATCTATCAGTACAACCAAATACTATAGC AAACGCGGTTATTTTTGGCTCCATAAAAGGAACATTAACTGCTATCGATGATAAAGATGGTCAAACACTATGGCGTACAG ATGCTCCAAGCAGTATTTTTTCTCAGCCAACAATCTATGATAATTCAATTTACCTGCAAACTCATGATGGTTCAGTTTCA GCTTTTGATGCTAGAAATGGCTCTAAAGAATGGAGCGTTGCAAACAATATTCCTGAAATTACATTACCGAGTAACTCATC ACCTATAATACTCAATAACACTGTAATGATTGGTAATGCCTTTGGCGCAGTTTTAGGCTTTACTATAAAAAGAGGTGATA GAACAATTAATATACCAATAGCAATATCTCACGGTTCATCACCTGCTGATAAAATGGTAGATATCACCGCTAATCCTATG TTATATGATCACTATCTTATTTTTGCTGCTTACCAAGGAGCTATAGTTGCTTTAGACAAAGATAGTGGTAAAATGCTTTG GGCTAAGAAAGCATCCATTATTAACAATATGGCAATTAACAATGGGGTTATTTTTACCACTCAAGATGATAGCGAGCTAA AAGCTTATGATATACAAACTGGTGATACTGTTTGGACTCAAGATACTCTAAAATGGCGTAAAATAACAGCTCCTATTTAC TATAAAGGCTTGATAGTTGTTGCTGACTACCAAGGTTATCTACACTTTTTCAACTCGCTAAATGGTGAATATCTAGGTAG ATATAAGTTAACCTCTAAGAGCGATATTTTTGATTATGGTATTTCCGGACAATTAGTACCAACAGAAAAAGGAATTATTA TCGAAGCTGATAATGGAACTACATACTTAGTAGATGCCTATAGCAATAAGGTTATTTATGATAGTATATTAAGTGATTAC CAAGTTGATAAAGGTAAGAGTGTTGCGCGAATTTATCCGCTTGAGCAAGACAAGCCTACTAAAGCAACAGCTCCTTTAGC AACAAAAACTACACAAACAACAGAAACTAAATCTAAAGGCATCAATGCTACTATAATAATTGGTGATTTTAGTAAAGGTA AGCCAAGCTAA
Upstream 100 bases:
>100_bases TAAAAGCCATTGAATCTTGGCAAAAAGCTTTACAAGATCCTAATAGCTCTGATCAATTCAAACAGATTATTAGTCAACTT ATAAACAATACTAACTAGTT
Downstream 100 bases:
>100_bases TGTATAAAGGTATCAGACCATCAATATTTATCTTAATTCTCATGGTCTCTTTGGGACCATTTGGTGATACCATTTATGCA CCAGCATTGCCTGAGTTAAA
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 456; Mature: 456
Protein sequence:
>456_residues MKKLLFITAPLLLSVLTASCSKSNVPPPTPLAEKPPRETFVKVIWKRKTGNGNGSLANYNVAPAYANDTVFVPNQNGMAY ALAITNGKIIWKNDTGTNLSVQPNTIANAVIFGSIKGTLTAIDDKDGQTLWRTDAPSSIFSQPTIYDNSIYLQTHDGSVS AFDARNGSKEWSVANNIPEITLPSNSSPIILNNTVMIGNAFGAVLGFTIKRGDRTINIPIAISHGSSPADKMVDITANPM LYDHYLIFAAYQGAIVALDKDSGKMLWAKKASIINNMAINNGVIFTTQDDSELKAYDIQTGDTVWTQDTLKWRKITAPIY YKGLIVVADYQGYLHFFNSLNGEYLGRYKLTSKSDIFDYGISGQLVPTEKGIIIEADNGTTYLVDAYSNKVIYDSILSDY QVDKGKSVARIYPLEQDKPTKATAPLATKTTQTTETKSKGINATIIIGDFSKGKPS
Sequences:
>Translated_456_residues MKKLLFITAPLLLSVLTASCSKSNVPPPTPLAEKPPRETFVKVIWKRKTGNGNGSLANYNVAPAYANDTVFVPNQNGMAY ALAITNGKIIWKNDTGTNLSVQPNTIANAVIFGSIKGTLTAIDDKDGQTLWRTDAPSSIFSQPTIYDNSIYLQTHDGSVS AFDARNGSKEWSVANNIPEITLPSNSSPIILNNTVMIGNAFGAVLGFTIKRGDRTINIPIAISHGSSPADKMVDITANPM LYDHYLIFAAYQGAIVALDKDSGKMLWAKKASIINNMAINNGVIFTTQDDSELKAYDIQTGDTVWTQDTLKWRKITAPIY YKGLIVVADYQGYLHFFNSLNGEYLGRYKLTSKSDIFDYGISGQLVPTEKGIIIEADNGTTYLVDAYSNKVIYDSILSDY QVDKGKSVARIYPLEQDKPTKATAPLATKTTQTTETKSKGINATIIIGDFSKGKPS >Mature_456_residues MKKLLFITAPLLLSVLTASCSKSNVPPPTPLAEKPPRETFVKVIWKRKTGNGNGSLANYNVAPAYANDTVFVPNQNGMAY ALAITNGKIIWKNDTGTNLSVQPNTIANAVIFGSIKGTLTAIDDKDGQTLWRTDAPSSIFSQPTIYDNSIYLQTHDGSVS AFDARNGSKEWSVANNIPEITLPSNSSPIILNNTVMIGNAFGAVLGFTIKRGDRTINIPIAISHGSSPADKMVDITANPM LYDHYLIFAAYQGAIVALDKDSGKMLWAKKASIINNMAINNGVIFTTQDDSELKAYDIQTGDTVWTQDTLKWRKITAPIY YKGLIVVADYQGYLHFFNSLNGEYLGRYKLTSKSDIFDYGISGQLVPTEKGIIIEADNGTTYLVDAYSNKVIYDSILSDY QVDKGKSVARIYPLEQDKPTKATAPLATKTTQTTETKSKGINATIIIGDFSKGKPS
Specific function: May play a role in a homeostatic control mechanism that coordinates the overall outer membrane assembly process [H]
COG id: COG1520
COG function: function code S; FOG: WD40-like repeat
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To R.prowazekii RP232 [H]
Homologues:
Organism=Escherichia coli, GI1788859, Length=381, Percent_Identity=26.246719160105, Blast_Score=159, Evalue=4e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017687 - InterPro: IPR018391 - InterPro: IPR002372 - InterPro: IPR011047 [H]
Pfam domain/function: PF01011 PQQ [H]
EC number: NA
Molecular weight: Translated: 49674; Mature: 49674
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLFITAPLLLSVLTASCSKSNVPPPTPLAEKPPRETFVKVIWKRKTGNGNGSLANYN CCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHEEEEEEECCCCCCCCEEEEE VAPAYANDTVFVPNQNGMAYALAITNGKIIWKNDTGTNLSVQPNTIANAVIFGSIKGTLT ECCCCCCCEEEEECCCCCEEEEEEECCEEEEECCCCCEEEECCCCCEEEEEEEECCEEEE AIDDKDGQTLWRTDAPSSIFSQPTIYDNSIYLQTHDGSVSAFDARNGSKEWSVANNIPEI EEECCCCCEEEECCCCHHHHCCCEEECCEEEEEECCCCEEEEECCCCCCCCCHHCCCCEE TLPSNSSPIILNNTVMIGNAFGAVLGFTIKRGDRTINIPIAISHGSSPADKMVDITANPM EECCCCCCEEEECEEEEECHHHHEEEEEEECCCEEEEEEEEEECCCCCCHHEEEEECCCE LYDHYLIFAAYQGAIVALDKDSGKMLWAKKASIINNMAINNGVIFTTQDDSELKAYDIQT EEEEEEEEEEECCEEEEEECCCCCEEEEEHHHHHHCEEECCCEEEEECCCCCEEEEEECC GDTVWTQDTLKWRKITAPIYYKGLIVVADYQGYLHFFNSLNGEYLGRYKLTSKSDIFDYG CCEEEECCCCEEEEEECCEEEEEEEEEEECCHHHHHHHCCCCCEEEEEEECCCCCCEEEC ISGQLVPTEKGIIIEADNGTTYLVDAYSNKVIYDSILSDYQVDKGKSVARIYPLEQDKPT CCCEEEECCCCEEEEECCCCEEEEECCCCCEEEHHHHCCCCCCCCCCEEEEEECCCCCCC KATAPLATKTTQTTETKSKGINATIIIGDFSKGKPS CCCCCCEECCCCCCCHHHCCCEEEEEEEECCCCCCC >Mature Secondary Structure MKKLLFITAPLLLSVLTASCSKSNVPPPTPLAEKPPRETFVKVIWKRKTGNGNGSLANYN CCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHEEEEEEECCCCCCCCEEEEE VAPAYANDTVFVPNQNGMAYALAITNGKIIWKNDTGTNLSVQPNTIANAVIFGSIKGTLT ECCCCCCCEEEEECCCCCEEEEEEECCEEEEECCCCCEEEECCCCCEEEEEEEECCEEEE AIDDKDGQTLWRTDAPSSIFSQPTIYDNSIYLQTHDGSVSAFDARNGSKEWSVANNIPEI EEECCCCCEEEECCCCHHHHCCCEEECCEEEEEECCCCEEEEECCCCCCCCCHHCCCCEE TLPSNSSPIILNNTVMIGNAFGAVLGFTIKRGDRTINIPIAISHGSSPADKMVDITANPM EECCCCCCEEEECEEEEECHHHHEEEEEEECCCEEEEEEEEEECCCCCCHHEEEEECCCE LYDHYLIFAAYQGAIVALDKDSGKMLWAKKASIINNMAINNGVIFTTQDDSELKAYDIQT EEEEEEEEEEECCEEEEEECCCCCEEEEEHHHHHHCEEECCCEEEEECCCCCEEEEEECC GDTVWTQDTLKWRKITAPIYYKGLIVVADYQGYLHFFNSLNGEYLGRYKLTSKSDIFDYG CCEEEECCCCEEEEEECCEEEEEEEEEEECCHHHHHHHCCCCCEEEEEEECCCCCCEEEC ISGQLVPTEKGIIIEADNGTTYLVDAYSNKVIYDSILSDYQVDKGKSVARIYPLEQDKPT CCCEEEECCCCEEEEECCCCEEEEECCCCCEEEHHHHCCCCCCCCCCEEEEEECCCCCCC KATAPLATKTTQTTETKSKGINATIIIGDFSKGKPS CCCCCCEECCCCCCCHHHCCCEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]