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The map label for this gene is trmL [H]

Identifier: 89256878

GI number: 89256878

Start: 1530970

End: 1531437

Strand: Reverse

Name: trmL [H]

Synonym: FTL_1601

Alternate gene names: 89256878

Gene position: 1531437-1530970 (Counterclockwise)

Preceding gene: 89256879

Following gene: 89256877

Centisome position: 80.77

GC content: 31.84

Gene sequence:

>468_bases
ATGATAAGTATTGCTTTATACGAGCCAGAAATCCCACCTAATACTGGCAATATAATTAGGTTGTGTGCAAATGTAGGAGC
AAAGTTACATTTAATAGAGCTATTCGGATTTAAGTTGGAAGATAAGCAACTAAGAAGAGCAGGTCTGGATTATCATGAAT
TTGCGGATCTTAAAATTTATAAAAACTTTGCTGAGTTTTATCAACAAAATAAAGATAAGCAAATTTGGGCATGCACAACC
AAAGCAAAACAGTATTATCATCAGGTAGATTTTAGTTGCGATGATATTTTACTTTTTGGTCCTGAAACTCGAGGGTTACC
TGCAGATGTATTAGAGTTACTAAAGCAAACACAACTGAAAATACCTATGCATAAAAATAGTCGTAGCTTAAATTTATCAA
ACTCTGTAGCAGTTATCTTATATGGAGCTTTAAATAATATTGGTTTTGAAAAATTAGGATTGTTATAG

Upstream 100 bases:

>100_bases
CAATCACTATAGAAACACTCATATCAATGAAAAGAGCAGGTGCTAAAGTGATACTTACATATACTGCGTTGGATGTGGCT
AATTGGTTAAAGGTTTAAAT

Downstream 100 bases:

>100_bases
AATAGCAATAAGGTCATAATTTGCCCTGTTAAATTTTTTATTTTTTAGTAGTTTTTTATAATCTTGAGGTAGAATTATGC
TTTAATCAAGGTCTGATTTT

Product: tRNA/rRNA methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MISIALYEPEIPPNTGNIIRLCANVGAKLHLIELFGFKLEDKQLRRAGLDYHEFADLKIYKNFAEFYQQNKDKQIWACTT
KAKQYYHQVDFSCDDILLFGPETRGLPADVLELLKQTQLKIPMHKNSRSLNLSNSVAVILYGALNNIGFEKLGLL

Sequences:

>Translated_155_residues
MISIALYEPEIPPNTGNIIRLCANVGAKLHLIELFGFKLEDKQLRRAGLDYHEFADLKIYKNFAEFYQQNKDKQIWACTT
KAKQYYHQVDFSCDDILLFGPETRGLPADVLELLKQTQLKIPMHKNSRSLNLSNSVAVILYGALNNIGFEKLGLL
>Mature_155_residues
MISIALYEPEIPPNTGNIIRLCANVGAKLHLIELFGFKLEDKQLRRAGLDYHEFADLKIYKNFAEFYQQNKDKQIWACTT
KAKQYYHQVDFSCDDILLFGPETRGLPADVLELLKQTQLKIPMHKNSRSLNLSNSVAVILYGALNNIGFEKLGLL

Specific function: Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide [H]

COG id: COG0219

COG function: function code J; Predicted rRNA methylase (SpoU class)

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase TrmH family. TrmL subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790034, Length=150, Percent_Identity=51.3333333333333, Blast_Score=167, Evalue=2e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004440
- InterPro:   IPR016914
- InterPro:   IPR001537 [H]

Pfam domain/function: PF00588 SpoU_methylase [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 17703; Mature: 17703

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISIALYEPEIPPNTGNIIRLCANVGAKLHLIELFGFKLEDKQLRRAGLDYHEFADLKIY
CEEEEEECCCCCCCCCHHHHEEHHCCCEEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHH
KNFAEFYQQNKDKQIWACTTKAKQYYHQVDFSCDDILLFGPETRGLPADVLELLKQTQLK
HHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHCEE
IPMHKNSRSLNLSNSVAVILYGALNNIGFEKLGLL
CCCCCCCCCEECCCCEEEEEEECCCCCCHHHHCCC
>Mature Secondary Structure
MISIALYEPEIPPNTGNIIRLCANVGAKLHLIELFGFKLEDKQLRRAGLDYHEFADLKIY
CEEEEEECCCCCCCCCHHHHEEHHCCCEEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHH
KNFAEFYQQNKDKQIWACTTKAKQYYHQVDFSCDDILLFGPETRGLPADVLELLKQTQLK
HHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHCEE
IPMHKNSRSLNLSNSVAVILYGALNNIGFEKLGLL
CCCCCCCCCEECCCCEEEEEEECCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]