| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
Click here to switch to the map view.
The map label for this gene is 89256856
Identifier: 89256856
GI number: 89256856
Start: 1505934
End: 1506653
Strand: Reverse
Name: 89256856
Synonym: FTL_1579
Alternate gene names: NA
Gene position: 1506653-1505934 (Counterclockwise)
Preceding gene: 89256859
Following gene: 89256855
Centisome position: 79.47
GC content: 37.92
Gene sequence:
>720_bases ATGAAAAAATCAAAAATCTTAGTTTCGATAGCAATTGCAGTTTTTGGAGCTGCAGGAACATCTTTTGCAGCAGAAGCTGA TAAGTCTAGTTCAACAGATAAACTATCACCAGAAGGTTACTGGGTTCAGTTTGATGAGGATAACGATGTTGGTCGTGGTA TGCCTAATGGAATTATTCATACATATTTTGCTAAGAATGATAAGTATGGTAAAAAAGGTACATTACAGATGGAAATCGTA GTGCCACTAATGTATGTTGACTCTTCTGGTAAGCCTACAAAGCCAAGAGCTACTTGCTATAATTGTTCTAATGGCTCTTA TAATGGCTTTAATTACAGGGGTGAAAATGCTCCTCTAGAAAGTTTTGTATTTGCTGGCAATATGCAGCCTGAAGCTGGGA CAGCTGTTGCTAACCAAAAGAGTGATATCTATAAAAATGGTGGAGTAATAAATCCAAATGATGGTAAGGTTTATGCTTCA GAGGCTCAAGTCCAAGATGGTGGAACTACTATGTTTGCCAAAGCCGCTTATCTTGTTTGGGGTAAAGAGTTAGGTAGCAA ATCTGCGCATTGGAAGAGAATAACAAAAGCTGACTATGAAAAAGTCAAAGCAGATTGTGGTGTAACAGCTGATGGTCAGT ATACTAATAGTGATGTAAAAGTCACTGCTACTTGTACTAATTACCCAGTTGCTCAGTTTGGAGTTAAAAGTCCCGTCTAA
Upstream 100 bases:
>100_bases AATTGTTAATAATAGTATTAAGTATATTTGAATAAAAATTACTTGTTTGTTACTATCGAGAAGTTAAACAAAAAAATTAT ATTCAAAAAAAGGAGATGAA
Downstream 100 bases:
>100_bases TTAGTTTGTATAATTACAAATTTTCTTTATACTTTATTCTAAAAGTAAATCTAAATAATCTTTAATAATGTTGCGTAATT TAATTGTTATAATTGTTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MKKSKILVSIAIAVFGAAGTSFAAEADKSSSTDKLSPEGYWVQFDEDNDVGRGMPNGIIHTYFAKNDKYGKKGTLQMEIV VPLMYVDSSGKPTKPRATCYNCSNGSYNGFNYRGENAPLESFVFAGNMQPEAGTAVANQKSDIYKNGGVINPNDGKVYAS EAQVQDGGTTMFAKAAYLVWGKELGSKSAHWKRITKADYEKVKADCGVTADGQYTNSDVKVTATCTNYPVAQFGVKSPV
Sequences:
>Translated_239_residues MKKSKILVSIAIAVFGAAGTSFAAEADKSSSTDKLSPEGYWVQFDEDNDVGRGMPNGIIHTYFAKNDKYGKKGTLQMEIV VPLMYVDSSGKPTKPRATCYNCSNGSYNGFNYRGENAPLESFVFAGNMQPEAGTAVANQKSDIYKNGGVINPNDGKVYAS EAQVQDGGTTMFAKAAYLVWGKELGSKSAHWKRITKADYEKVKADCGVTADGQYTNSDVKVTATCTNYPVAQFGVKSPV >Mature_239_residues MKKSKILVSIAIAVFGAAGTSFAAEADKSSSTDKLSPEGYWVQFDEDNDVGRGMPNGIIHTYFAKNDKYGKKGTLQMEIV VPLMYVDSSGKPTKPRATCYNCSNGSYNGFNYRGENAPLESFVFAGNMQPEAGTAVANQKSDIYKNGGVINPNDGKVYAS EAQVQDGGTTMFAKAAYLVWGKELGSKSAHWKRITKADYEKVKADCGVTADGQYTNSDVKVTATCTNYPVAQFGVKSPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25703; Mature: 25703
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSKILVSIAIAVFGAAGTSFAAEADKSSSTDKLSPEGYWVQFDEDNDVGRGMPNGIIH CCCCCEEEEEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEE TYFAKNDKYGKKGTLQMEIVVPLMYVDSSGKPTKPRATCYNCSNGSYNGFNYRGENAPLE EEEECCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHH SFVFAGNMQPEAGTAVANQKSDIYKNGGVINPNDGKVYASEAQVQDGGTTMFAKAAYLVW HEEEECCCCCCCCCEECCCCCHHHHCCCEECCCCCEEEEECCEECCCCEEEEHEEEEEEE GKELGSKSAHWKRITKADYEKVKADCGVTADGQYTNSDVKVTATCTNYPVAQFGVKSPV CHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEECCCEEEEEEECCCCHHHCCCCCCC >Mature Secondary Structure MKKSKILVSIAIAVFGAAGTSFAAEADKSSSTDKLSPEGYWVQFDEDNDVGRGMPNGIIH CCCCCEEEEEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEE TYFAKNDKYGKKGTLQMEIVVPLMYVDSSGKPTKPRATCYNCSNGSYNGFNYRGENAPLE EEEECCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHH SFVFAGNMQPEAGTAVANQKSDIYKNGGVINPNDGKVYASEAQVQDGGTTMFAKAAYLVW HEEEECCCCCCCCCEECCCCCHHHHCCCEECCCCCEEEEECCEECCCCEEEEHEEEEEEE GKELGSKSAHWKRITKADYEKVKADCGVTADGQYTNSDVKVTATCTNYPVAQFGVKSPV CHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEECCCEEEEEEECCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA