| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is trxB [H]
Identifier: 89256848
GI number: 89256848
Start: 1499219
End: 1500169
Strand: Direct
Name: trxB [H]
Synonym: FTL_1571
Alternate gene names: 89256848
Gene position: 1499219-1500169 (Clockwise)
Preceding gene: 89256847
Following gene: 89256849
Centisome position: 79.07
GC content: 36.8
Gene sequence:
>951_bases ATGGCAAATCATCATAAACTAATAATTTTAGGATCTGGGCCTGCTGGCTATACTGCAGCAATATATGCAGCACGTGCAAA CTTAAAGCCAGTAATTATCACTGGTATGCAACCAGGAGGTCAACTTACGACTACTACCGATGTAGATAACTGGCCTGGTG AGCCTGATGGTATCATAGGTCCTGAGCTTATGGAAAAACTACAAAAACAAGCAGAAAGATTCGATACACAAATAGTCTAT GACACTATCAATGCTGTAGATTTACAAAATAAACCTTTTAAACTAGTTGGTGAAGTTGAGCAATATACATGTGATACTCT AATTATAGCAACTGGTGCTACTGCTAAATATCTAGGTTTAGAGTCAGAAGAGAAGTTTATGGGTAAAGGTGTCTCTGCTT GTGCTACTTGTGATGGCTTCTTTTACAAAAATAAAGACGTTGCAGTAGTTGGTGGTGGCAACACTGCTGTTGAAGAAGCA TTATTTTTATCCAATATTGCTAAATCTGTAACTTTAATCCACCGTAGAGATACATTAAGGTCTGAAAAAATTCTTATCGA CAAGCTAATGGAAAAAGCTCAACATGGTAATATAAATATCATTTGGAACACTACTTTAGAAGAAGTTCTTGGCGATGATA TGGGAGTTAATGCTCTGCGTATCAAAAATATCAAAACTAATGAAGAGTCTCAAATTGATGTCGCTGGTGTTTTTATTGCT ATTGGCCATACACCAAATACTAGTATTTTTGCTGGTCAGCTTGAAATGGAAAATGGCTATATTAAGGTGAAATCAGGTCT AGCTGGCGATGCTACTCAAACAAATATCAAAGGGGTATTTGCAGCTGGTGATGTAGCTGATCATGTTTATAAACAAGCAG TAACATCTGCAGGTACTGGCTGTATGGCTGCACTAGATGCTGAGAAGTATTTAGATAATTTAGATCAATAA
Upstream 100 bases:
>100_bases TGTACCTAATATATACTATATAAACGTATTGAAAGTTTACTTAAATTAGCACTATGCTATAATTTGCTCTACATATTTAT TCAAAAATTTTTTAAAAAAA
Downstream 100 bases:
>100_bases AATATAAACCCTCACTTAATAAATTAAATATTAGCCATAATATAATTTTCAATTAGGTTCTGTGCACAAAAAACTTAAAT TATATTGAAAATAGCTAAAC
Product: thioredoxin reductase
Products: NA
Alternate protein names: TRXR [H]
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MANHHKLIILGSGPAGYTAAIYAARANLKPVIITGMQPGGQLTTTTDVDNWPGEPDGIIGPELMEKLQKQAERFDTQIVY DTINAVDLQNKPFKLVGEVEQYTCDTLIIATGATAKYLGLESEEKFMGKGVSACATCDGFFYKNKDVAVVGGGNTAVEEA LFLSNIAKSVTLIHRRDTLRSEKILIDKLMEKAQHGNINIIWNTTLEEVLGDDMGVNALRIKNIKTNEESQIDVAGVFIA IGHTPNTSIFAGQLEMENGYIKVKSGLAGDATQTNIKGVFAAGDVADHVYKQAVTSAGTGCMAALDAEKYLDNLDQ
Sequences:
>Translated_316_residues MANHHKLIILGSGPAGYTAAIYAARANLKPVIITGMQPGGQLTTTTDVDNWPGEPDGIIGPELMEKLQKQAERFDTQIVY DTINAVDLQNKPFKLVGEVEQYTCDTLIIATGATAKYLGLESEEKFMGKGVSACATCDGFFYKNKDVAVVGGGNTAVEEA LFLSNIAKSVTLIHRRDTLRSEKILIDKLMEKAQHGNINIIWNTTLEEVLGDDMGVNALRIKNIKTNEESQIDVAGVFIA IGHTPNTSIFAGQLEMENGYIKVKSGLAGDATQTNIKGVFAAGDVADHVYKQAVTSAGTGCMAALDAEKYLDNLDQ >Mature_315_residues ANHHKLIILGSGPAGYTAAIYAARANLKPVIITGMQPGGQLTTTTDVDNWPGEPDGIIGPELMEKLQKQAERFDTQIVYD TINAVDLQNKPFKLVGEVEQYTCDTLIIATGATAKYLGLESEEKFMGKGVSACATCDGFFYKNKDVAVVGGGNTAVEEAL FLSNIAKSVTLIHRRDTLRSEKILIDKLMEKAQHGNINIIWNTTLEEVLGDDMGVNALRIKNIKTNEESQIDVAGVFIAI GHTPNTSIFAGQLEMENGYIKVKSGLAGDATQTNIKGVFAAGDVADHVYKQAVTSAGTGCMAALDAEKYLDNLDQ
Specific function: Unknown
COG id: COG0492
COG function: function code O; Thioredoxin reductase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI1787114, Length=312, Percent_Identity=67.948717948718, Blast_Score=462, Evalue=1e-131, Organism=Escherichia coli, GI87081763, Length=300, Percent_Identity=33, Blast_Score=143, Evalue=2e-35, Organism=Saccharomyces cerevisiae, GI6320560, Length=324, Percent_Identity=50.3086419753086, Blast_Score=309, Evalue=4e-85, Organism=Saccharomyces cerevisiae, GI6321898, Length=321, Percent_Identity=48.5981308411215, Blast_Score=298, Evalue=9e-82,
Paralogues:
None
Copy number: 808 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR008255 - InterPro: IPR001327 - InterPro: IPR000103 - InterPro: IPR005982 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: =1.8.1.9 [H]
Molecular weight: Translated: 33972; Mature: 33841
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS00573 PYRIDINE_REDOX_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANHHKLIILGSGPAGYTAAIYAARANLKPVIITGMQPGGQLTTTTDVDNWPGEPDGIIG CCCCEEEEEEECCCCCCEEEEEEECCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCCCC PELMEKLQKQAERFDTQIVYDTINAVDLQNKPFKLVGEVEQYTCDTLIIATGATAKYLGL HHHHHHHHHHHHHHCCEEEEECCCEEECCCCCCCEEECHHHHCCCEEEEECCCCEEEECC ESEEKFMGKGVSACATCDGFFYKNKDVAVVGGGNTAVEEALFLSNIAKSVTLIHRRDTLR CCHHHHHCCCCCHHEECCCEEEECCCEEEEECCCHHHHHHHHHHHHHHHHEEEEHHHHHH SEKILIDKLMEKAQHGNINIIWNTTLEEVLGDDMGVNALRIKNIKTNEESQIDVAGVFIA HHHHHHHHHHHHHCCCCEEEEECCCHHHHCCCCCCCCEEEEEECCCCCCCCEEEEEEEEE IGHTPNTSIFAGQLEMENGYIKVKSGLAGDATQTNIKGVFAAGDVADHVYKQAVTSAGTG ECCCCCCCEEEEEEEECCCEEEEECCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCC CMAALDAEKYLDNLDQ CEEECCHHHHHHHCCC >Mature Secondary Structure ANHHKLIILGSGPAGYTAAIYAARANLKPVIITGMQPGGQLTTTTDVDNWPGEPDGIIG CCCEEEEEEECCCCCCEEEEEEECCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCCCC PELMEKLQKQAERFDTQIVYDTINAVDLQNKPFKLVGEVEQYTCDTLIIATGATAKYLGL HHHHHHHHHHHHHHCCEEEEECCCEEECCCCCCCEEECHHHHCCCEEEEECCCCEEEECC ESEEKFMGKGVSACATCDGFFYKNKDVAVVGGGNTAVEEALFLSNIAKSVTLIHRRDTLR CCHHHHHCCCCCHHEECCCEEEECCCEEEEECCCHHHHHHHHHHHHHHHHEEEEHHHHHH SEKILIDKLMEKAQHGNINIIWNTTLEEVLGDDMGVNALRIKNIKTNEESQIDVAGVFIA HHHHHHHHHHHHHCCCCEEEEECCCHHHHCCCCCCCCEEEEEECCCCCCCCEEEEEEEEE IGHTPNTSIFAGQLEMENGYIKVKSGLAGDATQTNIKGVFAAGDVADHVYKQAVTSAGTG ECCCCCCCEEEEEEEECCCEEEEECCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCC CMAALDAEKYLDNLDQ CEEECCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]