| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
Click here to switch to the map view.
The map label for this gene is 89256847
Identifier: 89256847
GI number: 89256847
Start: 1497910
End: 1499127
Strand: Direct
Name: 89256847
Synonym: FTL_1570
Alternate gene names: NA
Gene position: 1497910-1499127 (Clockwise)
Preceding gene: 89256846
Following gene: 89256848
Centisome position: 79.0
GC content: 29.31
Gene sequence:
>1218_bases ATGAGAATTTTATTTACAATTTTAGCTTTTTTTGGATACAGTTATGGGTTAGCACATGGAATTACTAAAACAATAGTACA CAACTATCCTGAAAACATATCAAAATCATTTCAAATTAGTAACAACAATTATGCTCCTTTACAAATTAGTAAACTAATCC AGAGTGCAAAGAAAAATATTGATATTGAAGTATTCTACATAGATATAAAAAAAGACAGTGTTCTAGATAAGATGATAATT CAACCTTTAGCAGCAAAGGCTAATCAAAGAATTAAAGTTAGAATTTTGGTGGATGACAAATTTTATAGCCAATACAGCAA CAACAAAGCTAGCTGTGATTATTTAAACTCTATTAAGAATATAACTTGTAAACCGACAAAAGAATTTCAAGAAGCTGTAA TGCACTCTAAAATGATAAGCATTGATGGTAAGTCTTTTTACATTGGTAGTCATAATTTTGATTGGATAACATTTGAACTT AATCATGAGCTAGGAGTTATTGTTAAAAATGATAAGATTAATGCTGCTAAACTTGAAAAATCTTTTAATGATGATTGGAA CTTTACTAATAAAAGTAAAAAGCTAACAGATAATAACTTGAATACATACTCACTTCATGACCAAGGAAATCAAGCGATTG TGACTGTTACACCTGATATAGATAAAAAAGGTTACCCTAAAAGTAATCTAAAAACTTTCATATCATTAATTAAATCTGCA AAATCAAGTATAGTAATCCAAGTAATGATTGTATCTGGAATAGATCCATACATGAATGATAAAAACTGGGATGAATTTAC AAAAGCCTTATCAGACGCTACTAAACGAAATGTTTATGTAAAAATTATGTTCTCAAATTGTATGTTTACCAAATCTTCGT ATAAAGATAGTAATGATTGGCTACAAAAACTGATTCATCAATCAAATCAAAATCACTTAAAGATCAAATACACATCATTA CCCCATACAAAACAATGTGTACCATTCTCTGAAGTAGATCATGCAAAATATGCTATTTTTGATGGTACCATAGCATGGGT TTCTACTTCTAATATACAAAAATCCTACTTATATGCGGCAAAAAACTATTCATACATTGTTGACGATAAAGACCTATCAC GGCAACTGACAGATGTTTTTGAGCAGCTTTGGGATAGTAAATATGCTCATACATATTCGCAACCTGTTGGTATAATATCA ACTCCGTCTTGTACCTAA
Upstream 100 bases:
>100_bases GTCCTTAGAGAGCTTTGCTTATATTGATGATTTTTCTACTATTAAAAATTTAATTTAGATAAAATAAAAACTGTTAACCC AAATCTAAGGAAATTTACTA
Downstream 100 bases:
>100_bases TATATACTATATAAACGTATTGAAAGTTTACTTAAATTAGCACTATGCTATAATTTGCTCTACATATTTATTCAAAAATT TTTTAAAAAAAATGGCAAAT
Product: phospholipase D family protein
Products: NA
Alternate protein names: Phospholipase D/Transphosphatidylase; Phospholipase D/ Transphosphatidylase; Phospholipase D
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MRILFTILAFFGYSYGLAHGITKTIVHNYPENISKSFQISNNNYAPLQISKLIQSAKKNIDIEVFYIDIKKDSVLDKMII QPLAAKANQRIKVRILVDDKFYSQYSNNKASCDYLNSIKNITCKPTKEFQEAVMHSKMISIDGKSFYIGSHNFDWITFEL NHELGVIVKNDKINAAKLEKSFNDDWNFTNKSKKLTDNNLNTYSLHDQGNQAIVTVTPDIDKKGYPKSNLKTFISLIKSA KSSIVIQVMIVSGIDPYMNDKNWDEFTKALSDATKRNVYVKIMFSNCMFTKSSYKDSNDWLQKLIHQSNQNHLKIKYTSL PHTKQCVPFSEVDHAKYAIFDGTIAWVSTSNIQKSYLYAAKNYSYIVDDKDLSRQLTDVFEQLWDSKYAHTYSQPVGIIS TPSCT
Sequences:
>Translated_405_residues MRILFTILAFFGYSYGLAHGITKTIVHNYPENISKSFQISNNNYAPLQISKLIQSAKKNIDIEVFYIDIKKDSVLDKMII QPLAAKANQRIKVRILVDDKFYSQYSNNKASCDYLNSIKNITCKPTKEFQEAVMHSKMISIDGKSFYIGSHNFDWITFEL NHELGVIVKNDKINAAKLEKSFNDDWNFTNKSKKLTDNNLNTYSLHDQGNQAIVTVTPDIDKKGYPKSNLKTFISLIKSA KSSIVIQVMIVSGIDPYMNDKNWDEFTKALSDATKRNVYVKIMFSNCMFTKSSYKDSNDWLQKLIHQSNQNHLKIKYTSL PHTKQCVPFSEVDHAKYAIFDGTIAWVSTSNIQKSYLYAAKNYSYIVDDKDLSRQLTDVFEQLWDSKYAHTYSQPVGIIS TPSCT >Mature_405_residues MRILFTILAFFGYSYGLAHGITKTIVHNYPENISKSFQISNNNYAPLQISKLIQSAKKNIDIEVFYIDIKKDSVLDKMII QPLAAKANQRIKVRILVDDKFYSQYSNNKASCDYLNSIKNITCKPTKEFQEAVMHSKMISIDGKSFYIGSHNFDWITFEL NHELGVIVKNDKINAAKLEKSFNDDWNFTNKSKKLTDNNLNTYSLHDQGNQAIVTVTPDIDKKGYPKSNLKTFISLIKSA KSSIVIQVMIVSGIDPYMNDKNWDEFTKALSDATKRNVYVKIMFSNCMFTKSSYKDSNDWLQKLIHQSNQNHLKIKYTSL PHTKQCVPFSEVDHAKYAIFDGTIAWVSTSNIQKSYLYAAKNYSYIVDDKDLSRQLTDVFEQLWDSKYAHTYSQPVGIIS TPSCT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI94681038, Length=289, Percent_Identity=23.8754325259516, Blast_Score=73, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17559458, Length=390, Percent_Identity=23.3333333333333, Blast_Score=106, Evalue=2e-23, Organism=Caenorhabditis elegans, GI193207667, Length=390, Percent_Identity=23.3333333333333, Blast_Score=106, Evalue=2e-23, Organism=Caenorhabditis elegans, GI193208604, Length=291, Percent_Identity=27.8350515463918, Blast_Score=82, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17565994, Length=355, Percent_Identity=21.6901408450704, Blast_Score=69, Evalue=5e-12, Organism=Caenorhabditis elegans, GI32566758, Length=355, Percent_Identity=21.6901408450704, Blast_Score=69, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17532785, Length=266, Percent_Identity=22.9323308270677, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24585591, Length=442, Percent_Identity=23.0769230769231, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI20129681, Length=442, Percent_Identity=23.0769230769231, Blast_Score=86, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.1.-
Molecular weight: Translated: 46478; Mature: 46478
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILFTILAFFGYSYGLAHGITKTIVHNYPENISKSFQISNNNYAPLQISKLIQSAKKNI CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCC DIEVFYIDIKKDSVLDKMIIQPLAAKANQRIKVRILVDDKFYSQYSNNKASCDYLNSIKN CEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHCCCCCCHHHHHHHHC ITCKPTKEFQEAVMHSKMISIDGKSFYIGSHNFDWITFELNHELGVIVKNDKINAAKLEK CCCCCHHHHHHHHHHHHEEEECCCEEEECCCCCEEEEEEECCCEEEEEECCCCCHHHHHH SFNDDWNFTNKSKKLTDNNLNTYSLHDQGNQAIVTVTPDIDKKGYPKSNLKTFISLIKSA CCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHC KSSIVIQVMIVSGIDPYMNDKNWDEFTKALSDATKRNVYVKIMFSNCMFTKSSYKDSNDW CCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEECEEEECCCCCCCHHH LQKLIHQSNQNHLKIKYTSLPHTKQCVPFSEVDHAKYAIFDGTIAWVSTSNIQKSYLYAA HHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCCCHHHEEEE KNYSYIVDDKDLSRQLTDVFEQLWDSKYAHTYSQPVGIISTPSCT CCCEEEECCHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEECCCCC >Mature Secondary Structure MRILFTILAFFGYSYGLAHGITKTIVHNYPENISKSFQISNNNYAPLQISKLIQSAKKNI CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCC DIEVFYIDIKKDSVLDKMIIQPLAAKANQRIKVRILVDDKFYSQYSNNKASCDYLNSIKN CEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHCCCCCCHHHHHHHHC ITCKPTKEFQEAVMHSKMISIDGKSFYIGSHNFDWITFELNHELGVIVKNDKINAAKLEK CCCCCHHHHHHHHHHHHEEEECCCEEEECCCCCEEEEEEECCCEEEEEECCCCCHHHHHH SFNDDWNFTNKSKKLTDNNLNTYSLHDQGNQAIVTVTPDIDKKGYPKSNLKTFISLIKSA CCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHC KSSIVIQVMIVSGIDPYMNDKNWDEFTKALSDATKRNVYVKIMFSNCMFTKSSYKDSNDW CCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEECEEEECCCCCCCHHH LQKLIHQSNQNHLKIKYTSLPHTKQCVPFSEVDHAKYAIFDGTIAWVSTSNIQKSYLYAA HHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCCCHHHEEEE KNYSYIVDDKDLSRQLTDVFEQLWDSKYAHTYSQPVGIISTPSCT CCCEEEECCHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA