| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89255801
Identifier: 89255801
GI number: 89255801
Start: 359970
End: 361055
Strand: Reverse
Name: 89255801
Synonym: FTL_0390
Alternate gene names: NA
Gene position: 361055-359970 (Counterclockwise)
Preceding gene: 89255802
Following gene: 89255798
Centisome position: 19.04
GC content: 36.1
Gene sequence:
>1086_bases ATGGTTATAAAAAAAGATGTCCAATCTTATTTTATTGTGCATGGTGTCTCAACCCAAGAACAGTTAGAAAATTATGATGT CACAGATCATGCTGATGTTGGTAGCGATACTACTAGCGTAATGAGTAATATAGTAGGTCATAACGGTAGAATAGTTGGTG TAAGCACGATCAAAGGCACAACTTACCAAATAGCTCTGACTCCAAGGATAGAGGGTGGTACATTCAACTGGACATGCTCT ATTTCAATAGTTGAACAAGACGCTAGCTTTGATAATAGTTATAATGGTCAAGTCTTCTTTGGATTTATTGATAATAATAG TAGCTCATATGCCGCTCCAAGCAGTAGTATGCTACCAAGAGGTTGTAATGCTACAGATAGCAACCAAAATACTGATTTCG AAGCATATAGATCAGAAAGACAGACACTAGATACAGAGCTTATAAATAGTCACAACCAAGCTCTAAACGCATGGCAACAA CGTACAGCTATCGCTGCGGCTCAAGACCAAGACTATAGTGATTTAAAAAATAATATGGATGCTGCTGAAATTAGAGCTGA TACTGCATTTAGTGATTATAACAAATACCAAGATATCGCTAATTATCAAAGTACTATTGATCACTATCAAGGACTTATTA ATAATGCTACAAGTGATGACGATATTGCACAATATGAAAGCGCTATTCAACACTATCGAGGTCTAATAGATAGTGTCCAA TCTTCACTATCTAGTCAAGCTGGCAATGATTATAGCAACGCTCAAGAAGCTGCTACTTTCTTTAATCAACAGCGCGATAT CTATAACCAAAATAGAGAAAGTGCTAATACGCGATATACTGAGCTACAAGACCAGCAGAGAAACGTATCAAGCTCGATTA ATGGTAATACTAGCCAAGGCTTTGATAATGACTACAATAGTGCATATGAGCAATATAATAACGCAATGGATTCACTACAA TCTAGTCTTAACAACTCAGCAGTAAATGTCGATAGAGTTGATACTTATCAGGGTGAAGACTATAATGCTCATAACTTTGG TCAAATTAGTGATAAGTTTAACTCTTGGCAATATCGTAATATTTAG
Upstream 100 bases:
>100_bases GTTGTTATAGCTATTATAGGCATTTTGTCGATACTAGTTATCCCAGCGTATTCAAACTATGTCACTAGAACAAGATTGAC AGAAGCCTTGACAGTTTTAG
Downstream 100 bases:
>100_bases CTAATCAATAGCCAGTAGCCTAGTGGTTAGTATTTATGTTTATTTTAGATGATTTTTAAATCTAGTTGGCTGAGTAATAA AGTCGAAGACTCATTTTACT
Product: Type IV pili fiber building block protein
Products: NA
Alternate protein names: Type IV Pili Pilus Assembly Protein
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MVIKKDVQSYFIVHGVSTQEQLENYDVTDHADVGSDTTSVMSNIVGHNGRIVGVSTIKGTTYQIALTPRIEGGTFNWTCS ISIVEQDASFDNSYNGQVFFGFIDNNSSSYAAPSSSMLPRGCNATDSNQNTDFEAYRSERQTLDTELINSHNQALNAWQQ RTAIAAAQDQDYSDLKNNMDAAEIRADTAFSDYNKYQDIANYQSTIDHYQGLINNATSDDDIAQYESAIQHYRGLIDSVQ SSLSSQAGNDYSNAQEAATFFNQQRDIYNQNRESANTRYTELQDQQRNVSSSINGNTSQGFDNDYNSAYEQYNNAMDSLQ SSLNNSAVNVDRVDTYQGEDYNAHNFGQISDKFNSWQYRNI
Sequences:
>Translated_361_residues MVIKKDVQSYFIVHGVSTQEQLENYDVTDHADVGSDTTSVMSNIVGHNGRIVGVSTIKGTTYQIALTPRIEGGTFNWTCS ISIVEQDASFDNSYNGQVFFGFIDNNSSSYAAPSSSMLPRGCNATDSNQNTDFEAYRSERQTLDTELINSHNQALNAWQQ RTAIAAAQDQDYSDLKNNMDAAEIRADTAFSDYNKYQDIANYQSTIDHYQGLINNATSDDDIAQYESAIQHYRGLIDSVQ SSLSSQAGNDYSNAQEAATFFNQQRDIYNQNRESANTRYTELQDQQRNVSSSINGNTSQGFDNDYNSAYEQYNNAMDSLQ SSLNNSAVNVDRVDTYQGEDYNAHNFGQISDKFNSWQYRNI >Mature_361_residues MVIKKDVQSYFIVHGVSTQEQLENYDVTDHADVGSDTTSVMSNIVGHNGRIVGVSTIKGTTYQIALTPRIEGGTFNWTCS ISIVEQDASFDNSYNGQVFFGFIDNNSSSYAAPSSSMLPRGCNATDSNQNTDFEAYRSERQTLDTELINSHNQALNAWQQ RTAIAAAQDQDYSDLKNNMDAAEIRADTAFSDYNKYQDIANYQSTIDHYQGLINNATSDDDIAQYESAIQHYRGLIDSVQ SSLSSQAGNDYSNAQEAATFFNQQRDIYNQNRESANTRYTELQDQQRNVSSSINGNTSQGFDNDYNSAYEQYNNAMDSLQ SSLNNSAVNVDRVDTYQGEDYNAHNFGQISDKFNSWQYRNI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40448; Mature: 40448
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIKKDVQSYFIVHGVSTQEQLENYDVTDHADVGSDTTSVMSNIVGHNGRIVGVSTIKGT CCCHHHHHHEEEEECCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCC TYQIALTPRIEGGTFNWTCSISIVEQDASFDNSYNGQVFFGFIDNNSSSYAAPSSSMLPR EEEEEEEEEECCCEEEEEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC GCNATDSNQNTDFEAYRSERQTLDTELINSHNQALNAWQQRTAIAAAQDQDYSDLKNNMD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCC AAEIRADTAFSDYNKYQDIANYQSTIDHYQGLINNATSDDDIAQYESAIQHYRGLIDSVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH SSLSSQAGNDYSNAQEAATFFNQQRDIYNQNRESANTRYTELQDQQRNVSSSINGNTSQG HHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHCCCCCCCCC FDNDYNSAYEQYNNAMDSLQSSLNNSAVNVDRVDTYQGEDYNAHNFGQISDKFNSWQYRN CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCEECCC I C >Mature Secondary Structure MVIKKDVQSYFIVHGVSTQEQLENYDVTDHADVGSDTTSVMSNIVGHNGRIVGVSTIKGT CCCHHHHHHEEEEECCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCC TYQIALTPRIEGGTFNWTCSISIVEQDASFDNSYNGQVFFGFIDNNSSSYAAPSSSMLPR EEEEEEEEEECCCEEEEEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC GCNATDSNQNTDFEAYRSERQTLDTELINSHNQALNAWQQRTAIAAAQDQDYSDLKNNMD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCC AAEIRADTAFSDYNKYQDIANYQSTIDHYQGLINNATSDDDIAQYESAIQHYRGLIDSVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH SSLSSQAGNDYSNAQEAATFFNQQRDIYNQNRESANTRYTELQDQQRNVSSSINGNTSQG HHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHCCCCCCCCC FDNDYNSAYEQYNNAMDSLQSSLNNSAVNVDRVDTYQGEDYNAHNFGQISDKFNSWQYRN CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCEECCC I C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA