| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89255777
Identifier: 89255777
GI number: 89255777
Start: 333261
End: 333767
Strand: Reverse
Name: 89255777
Synonym: FTL_0356
Alternate gene names: NA
Gene position: 333767-333261 (Counterclockwise)
Preceding gene: 89255779
Following gene: 89255776
Centisome position: 17.6
GC content: 28.8
Gene sequence:
>507_bases ATGAATGTTATTAACAAAGAAAATCTAACTAAACAGCAAAGATATTGGCTAAATGATGCTAAAAACCTAGTTACAAGTTT ATCTAAATTTTATGGCGAGATTACGATAGATAAAATTTCACAGCAATTTACTAATATAAATTCTCTTGAGCAATCTCTCT TAGCAACTCAAACAGCACTAGTAAGACAAATTACCCTCTCTAGTATCAATCAAACCTTAGTTTTTGCTAGGACGATTATT CCTGATAGTACTTATAAACATTTTACTCAAGAGCTAGATAACCTTGGTACTAAACCTATCGGTGATAATTTGCTCTTTGA TAAAGCTAAATTTGCTAGAGATGAATTTATAATTCGTGAACTAACTGTTAAAGATTTTTATAATGAAACTAATAGAGATA TTACTGATAAAATATTCTCTCGTAGCTCAATATTTGAATATAAAGATAACTCAGAACTTAAATTTTTGATTACGGAATAT TTCCTAGTTTTACCCGAGCAATACTGA
Upstream 100 bases:
>100_bases ATTTTAGAATCCTTTTAATTAATTTCATAGCCTTATAAGTGTATAATTATACAAATCGAAATTAAAATAAGAAACCTTAA CTTTAGGGTATTTCTGATAT
Downstream 100 bases:
>100_bases CTATGAATAAACAACAACTAAAAGCATATTTCATGCTAATGCGACTACATCGCCCTATTCCGATATTACTAATCTTGTGG CCAACACTTACAGCATTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MNVINKENLTKQQRYWLNDAKNLVTSLSKFYGEITIDKISQQFTNINSLEQSLLATQTALVRQITLSSINQTLVFARTII PDSTYKHFTQELDNLGTKPIGDNLLFDKAKFARDEFIIRELTVKDFYNETNRDITDKIFSRSSIFEYKDNSELKFLITEY FLVLPEQY
Sequences:
>Translated_168_residues MNVINKENLTKQQRYWLNDAKNLVTSLSKFYGEITIDKISQQFTNINSLEQSLLATQTALVRQITLSSINQTLVFARTII PDSTYKHFTQELDNLGTKPIGDNLLFDKAKFARDEFIIRELTVKDFYNETNRDITDKIFSRSSIFEYKDNSELKFLITEY FLVLPEQY >Mature_168_residues MNVINKENLTKQQRYWLNDAKNLVTSLSKFYGEITIDKISQQFTNINSLEQSLLATQTALVRQITLSSINQTLVFARTII PDSTYKHFTQELDNLGTKPIGDNLLFDKAKFARDEFIIRELTVKDFYNETNRDITDKIFSRSSIFEYKDNSELKFLITEY FLVLPEQY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19699; Mature: 19699
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVINKENLTKQQRYWLNDAKNLVTSLSKFYGEITIDKISQQFTNINSLEQSLLATQTAL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VRQITLSSINQTLVFARTIIPDSTYKHFTQELDNLGTKPIGDNLLFDKAKFARDEFIIRE HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH LTVKDFYNETNRDITDKIFSRSSIFEYKDNSELKFLITEYFLVLPEQY HHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MNVINKENLTKQQRYWLNDAKNLVTSLSKFYGEITIDKISQQFTNINSLEQSLLATQTAL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VRQITLSSINQTLVFARTIIPDSTYKHFTQELDNLGTKPIGDNLLFDKAKFARDEFIIRE HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH LTVKDFYNETNRDITDKIFSRSSIFEYKDNSELKFLITEYFLVLPEQY HHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA