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The map label for this gene is yiaD [C]

Identifier: 89255751

GI number: 89255751

Start: 310408

End: 311661

Strand: Reverse

Name: yiaD [C]

Synonym: FTL_0325

Alternate gene names: 89255751

Gene position: 311661-310408 (Counterclockwise)

Preceding gene: 89255756

Following gene: 89255750

Centisome position: 16.44

GC content: 31.58

Gene sequence:

>1254_bases
ATGAAAAAATTACTGAAACTATGCTTAATGACATCATTACTTACAACACTCTCAGCCTGCCAAACACTAGATGATAAAGA
TAAAGATAGTGGTCCACTAACATTTCCAACATTAGAACCTTGTACTGCTGAGCTACTTCAATCAAATCAATCTTTTATAT
GTGTAAAAGAACAAACAGGACCTGATCTAATCGAAACAAATATAAAATTTGATGCTGATAGCTATACATTAAACACTCAG
GCTAAAGAAGTTTTAGATAAGCTTTTTGCTTATTTGAAACTAACTGATACTACAAATTTCACAATTAAAGGTTATGCTGG
AAAAGTTGAATCAAAAATTCTCACAGATCAGAAAATCCTAACCGACTATAATATTAGACTATCAAAAAACCGTGCTAGTA
GTGTCGAAGAATACCTTGTAAACAAAGGTCTTGGCTCTAGTGATGGAATTACTATTAAAGCCTTAGGTTATCAAGATCCT
ATCGCCCCTAATGACTCAACCTCAAGTAGAGCTATAAATCAGCGCGTTGAAATTACTCTAAAAAGTAGACTTATAGAGCA
AATTGATAATATTGAAAATAACTTAGAGCATGTCAGACCAGCTGAATATACAAAATTCTTCTCAAATGTATATTTACTTA
ATGATAATCAGATAGACAATATTTCAAGAATATACAATTCTAGAGAGAAACGCCCAATACTCGGAATTAACTTTAAAATC
TTTGCTAACAAAGAATATACAGCAGCCAAGGATAACAGTAACTTCATAATAATATCCGAACCAAAACCAATATCTTCATT
TAATGATGATAAAAAAGTCTATAGACTAGGCTCAGCAAAATATGATTATACCTTTAAAGGTATAACAGCATTGACGATAA
CTAATTTAAGTCGTGAAGCTAGTGTAGGCAATTATGTAATACCTAATGATATTGTTTCACAACAACTGCCAGAACAAACT
TTTAAAATGAAAAGCAAAATAACAGCTAATGTACTTGAAGATGTAATGAATACTAATACATTCTCATCTTCGTATAATAG
TATTCTATTGAACAAAGGCGCTGCTGATGGCTTGAAAGTAGGCGCTCAAGTTATTTTATATGAACCAGAAACCAGAGTAG
ATGGTTTTCCAGTCCCACCTAAATATATTGGTTATGGTTTTATCTATAGAGAATCTCAACACTACTCTATAGCCCTAATT
GTCAATTCACTACAAGAAATTACAAATAATTCAATGGCAACGACTATTTTATAA

Upstream 100 bases:

>100_bases
AACAGATTATTAAATTAATTATAGCTATTACAAATACTATTCTCACTCCTAAGTTTATAGTACACTTAATGATATAAAAT
ACTATTTTAGGTTTTATACT

Downstream 100 bases:

>100_bases
TGATTGATAATACCATCAAAAACTTAATTATACTTTCTATTACACCCTACTTTGGCAATACAAGGTTTGTTAAAGCTAAA
GAAAATAATTTTGATTTTAA

Product: OmpA family protein

Products: NA

Alternate protein names: Ompa/Motb Domain Protein; Lipoprotein YiaD; OmpA/MotB Domain-Containing Protein; OmpA/MotB Domain Protein; OmpA/MotB

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MKKLLKLCLMTSLLTTLSACQTLDDKDKDSGPLTFPTLEPCTAELLQSNQSFICVKEQTGPDLIETNIKFDADSYTLNTQ
AKEVLDKLFAYLKLTDTTNFTIKGYAGKVESKILTDQKILTDYNIRLSKNRASSVEEYLVNKGLGSSDGITIKALGYQDP
IAPNDSTSSRAINQRVEITLKSRLIEQIDNIENNLEHVRPAEYTKFFSNVYLLNDNQIDNISRIYNSREKRPILGINFKI
FANKEYTAAKDNSNFIIISEPKPISSFNDDKKVYRLGSAKYDYTFKGITALTITNLSREASVGNYVIPNDIVSQQLPEQT
FKMKSKITANVLEDVMNTNTFSSSYNSILLNKGAADGLKVGAQVILYEPETRVDGFPVPPKYIGYGFIYRESQHYSIALI
VNSLQEITNNSMATTIL

Sequences:

>Translated_417_residues
MKKLLKLCLMTSLLTTLSACQTLDDKDKDSGPLTFPTLEPCTAELLQSNQSFICVKEQTGPDLIETNIKFDADSYTLNTQ
AKEVLDKLFAYLKLTDTTNFTIKGYAGKVESKILTDQKILTDYNIRLSKNRASSVEEYLVNKGLGSSDGITIKALGYQDP
IAPNDSTSSRAINQRVEITLKSRLIEQIDNIENNLEHVRPAEYTKFFSNVYLLNDNQIDNISRIYNSREKRPILGINFKI
FANKEYTAAKDNSNFIIISEPKPISSFNDDKKVYRLGSAKYDYTFKGITALTITNLSREASVGNYVIPNDIVSQQLPEQT
FKMKSKITANVLEDVMNTNTFSSSYNSILLNKGAADGLKVGAQVILYEPETRVDGFPVPPKYIGYGFIYRESQHYSIALI
VNSLQEITNNSMATTIL
>Mature_417_residues
MKKLLKLCLMTSLLTTLSACQTLDDKDKDSGPLTFPTLEPCTAELLQSNQSFICVKEQTGPDLIETNIKFDADSYTLNTQ
AKEVLDKLFAYLKLTDTTNFTIKGYAGKVESKILTDQKILTDYNIRLSKNRASSVEEYLVNKGLGSSDGITIKALGYQDP
IAPNDSTSSRAINQRVEITLKSRLIEQIDNIENNLEHVRPAEYTKFFSNVYLLNDNQIDNISRIYNSREKRPILGINFKI
FANKEYTAAKDNSNFIIISEPKPISSFNDDKKVYRLGSAKYDYTFKGITALTITNLSREASVGNYVIPNDIVSQQLPEQT
FKMKSKITANVLEDVMNTNTFSSSYNSILLNKGAADGLKVGAQVILYEPETRVDGFPVPPKYIGYGFIYRESQHYSIALI
VNSLQEITNNSMATTIL

Specific function: Unknown

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46755; Mature: 46755

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLKLCLMTSLLTTLSACQTLDDKDKDSGPLTFPTLEPCTAELLQSNQSFICVKEQTG
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHCCCCEEEEECCCC
PDLIETNIKFDADSYTLNTQAKEVLDKLFAYLKLTDTTNFTIKGYAGKVESKILTDQKIL
CCEEECCEEECCCCEEECHHHHHHHHHHHHHEEEECCCCEEEEECCCCHHHHHHCCCHHE
TDYNIRLSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDSTSSRAINQRVEITL
EEEEEEEECCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHEEHH
KSRLIEQIDNIENNLEHVRPAEYTKFFSNVYLLNDNQIDNISRIYNSREKRPILGINFKI
HHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEEECCCCCHHHHHHHCCCCCCCEEEEEEEE
FANKEYTAAKDNSNFIIISEPKPISSFNDDKKVYRLGSAKYDYTFKGITALTITNLSREA
EECCCEEECCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCEEECCEEEEEEECCCCCC
SVGNYVIPNDIVSQQLPEQTFKMKSKITANVLEDVMNTNTFSSSYNSILLNKGAADGLKV
CCCCEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCC
GAQVILYEPETRVDGFPVPPKYIGYGFIYRESQHYSIALIVNSLQEITNNSMATTIL
CCEEEEECCCCCCCCCCCCHHHHCCEEEEECCCCEEEEHHHHHHHHHHCCCEEEECC
>Mature Secondary Structure
MKKLLKLCLMTSLLTTLSACQTLDDKDKDSGPLTFPTLEPCTAELLQSNQSFICVKEQTG
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHCCCCEEEEECCCC
PDLIETNIKFDADSYTLNTQAKEVLDKLFAYLKLTDTTNFTIKGYAGKVESKILTDQKIL
CCEEECCEEECCCCEEECHHHHHHHHHHHHHEEEECCCCEEEEECCCCHHHHHHCCCHHE
TDYNIRLSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDSTSSRAINQRVEITL
EEEEEEEECCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHEEHH
KSRLIEQIDNIENNLEHVRPAEYTKFFSNVYLLNDNQIDNISRIYNSREKRPILGINFKI
HHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEEECCCCCHHHHHHHCCCCCCCEEEEEEEE
FANKEYTAAKDNSNFIIISEPKPISSFNDDKKVYRLGSAKYDYTFKGITALTITNLSREA
EECCCEEECCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCEEECCEEEEEEECCCCCC
SVGNYVIPNDIVSQQLPEQTFKMKSKITANVLEDVMNTNTFSSSYNSILLNKGAADGLKV
CCCCEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCC
GAQVILYEPETRVDGFPVPPKYIGYGFIYRESQHYSIALIVNSLQEITNNSMATTIL
CCEEEEECCCCCCCCCCCCHHHHCCEEEEECCCCEEEEHHHHHHHHHHCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA