| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89255750
Identifier: 89255750
GI number: 89255750
Start: 305982
End: 307499
Strand: Reverse
Name: 89255750
Synonym: FTL_0320
Alternate gene names: NA
Gene position: 307499-305982 (Counterclockwise)
Preceding gene: 89255751
Following gene: 89255749
Centisome position: 16.22
GC content: 33.86
Gene sequence:
>1518_bases ATGAGCCAAAAAGATTTAAGCCCATTCGAATTTAAAGATGAATTAATAAAACTAGCAACAAGTAAAGCTGATAGATTAAT GTTAAATGCTGGTCGTGGTAATCCTAACTTTTTGGCAACTATTCCTAGACATGCTTTTTTACGTCTTGGGGATTTTGCAC TTAGAGAATCAGAGAGATCTTACTCTTATCTTAACAACGTCTTTGGTGGGCTACCTGAGAAAAAAGGTATTACAGAAAGA TTTGATTACTATTGTTTAGCTCATGATAAGCAAGATGGTATTGATTTTCTTAGGGCTGCCATCTCTTTTGTCGATGATCA CTTAGGCATCAATAAAGAAGAATTCTTATATGAAATGACAAATGCATATCTTGGATGCAATTATCCTTCACCTCCAAGAA TACTACCAATTATAGAAAAAATTGTTATGCATTATTTACGTGAAGAACTTTATCAAAATACAGATACCCCATTAGAGTTT GATATTTTTGCAACAGAAGGTGGTACTGCTGCCATGACATATATCTTTCAGTCTGCAAAAATAAATGGGCTGCTTAATGC TCATGACAAAATAGCAATGATTACGCCTATTTTTTCGCCATACCTAGAAATCCCAGAGTTACCAGAATACAATAATCCTA TAGTTCATATTTATGCCGATGAAAAAGTATATTGGCAAGTTACTGATAAGGAGCTCGAGAAACTACTAGACCCCACAATC AAAATACTTTGCTTAGTAAACCCAAGTAACCCACCCTCAGTCAAAATCAGTGACTTGGTTCTAGAAAAAATAGCTTATAT AATTGACAATCATAGATCTGATTTAATGATTATTACCGATGATGTTTATGCCACTTTCTCGGATGACTTTGAATCACTAT TTTCAAAATGTGCTTACAATACTCTTTGTGTTTATTCATTTTCCAAGTACTTTGGAGCAACAGGCTGGCGCATAGGTACA ATAGCCTTACACAAAGATAATATTTTTGATAAGTTAATTAGTAACTTGGATGATAAAAAACTAGATGAGCTTGATAAACA TTATAGTTCTCTTACAACAGACTCAAGAACATTAAAGTTTATTGATAGATTAGTTGCTGACAGTCGCTCAGTTGCACTAA ATCATACTGCAGGTATTTCATTACCACAACAATTACAGATGGGATTATTCGCACTTTCTAGCTTGTTAGACAATCAAAAT ATTTACCGCAAAGAAGCAAAAGATCTCATACGTAGACGTTATAATATTCTATATAGCTCTATTTCACCTAAATTACAACA AAGTTTAGATGAGAATAATGTCGGCTACTATACCTTATTAGATCTAGAAGAACTTTCATATAAGATATATGATAAAGATT TCTCTCAATGGTTGATAAAAAATCATAGCGGCCCCGAGACGCTAAAAATTCTAGCTACTGAGACAGGAATTGTCTTACTT CCTGGCAAAGGTTTTGATGTCCTACATCCTTCTGCTAGGGTTTCCTTGGCAAATCTACGCGAATATGATTACAGGTAA
Upstream 100 bases:
>100_bases CTTTACATCATCATACGCTTTAGCAAATATATGGTTGACACTGTGGGGACCTGTAATAGTTGCATTAGTAACAATCATAC CTAAATAAAAGGACATTTTT
Downstream 100 bases:
>100_bases ATTGGTATTAGTATCAGACAACAGCTAGATAATTTATACTCACAATACAAAAAACAAACTAAAGATTAAAACGAAATAGA CTTTTTTACTACTAATCACT
Product: aspartate aminotransferase
Products: NA
Alternate protein names: Aminotransferase Class I And II; L-Aspartate Beta-Decarboxylase; Aspartate/Tyrosine/Aromatic Aminotransferase; Aspartate 4-Decarboxylase; Class I/II Aminotransferase; Aminotransferase Classes I And II Superfamily; Aspartate Decarboxylase; Aromatic Amino Acid Aminotransferase; Class I And II Aminotransferase; Transferase; Aminotransferase Classes I And II; Histidinol-Phosphate Aminotransferase; Aromatic Aminotransferase
Number of amino acids: Translated: 505; Mature: 504
Protein sequence:
>505_residues MSQKDLSPFEFKDELIKLATSKADRLMLNAGRGNPNFLATIPRHAFLRLGDFALRESERSYSYLNNVFGGLPEKKGITER FDYYCLAHDKQDGIDFLRAAISFVDDHLGINKEEFLYEMTNAYLGCNYPSPPRILPIIEKIVMHYLREELYQNTDTPLEF DIFATEGGTAAMTYIFQSAKINGLLNAHDKIAMITPIFSPYLEIPELPEYNNPIVHIYADEKVYWQVTDKELEKLLDPTI KILCLVNPSNPPSVKISDLVLEKIAYIIDNHRSDLMIITDDVYATFSDDFESLFSKCAYNTLCVYSFSKYFGATGWRIGT IALHKDNIFDKLISNLDDKKLDELDKHYSSLTTDSRTLKFIDRLVADSRSVALNHTAGISLPQQLQMGLFALSSLLDNQN IYRKEAKDLIRRRYNILYSSISPKLQQSLDENNVGYYTLLDLEELSYKIYDKDFSQWLIKNHSGPETLKILATETGIVLL PGKGFDVLHPSARVSLANLREYDYR
Sequences:
>Translated_505_residues MSQKDLSPFEFKDELIKLATSKADRLMLNAGRGNPNFLATIPRHAFLRLGDFALRESERSYSYLNNVFGGLPEKKGITER FDYYCLAHDKQDGIDFLRAAISFVDDHLGINKEEFLYEMTNAYLGCNYPSPPRILPIIEKIVMHYLREELYQNTDTPLEF DIFATEGGTAAMTYIFQSAKINGLLNAHDKIAMITPIFSPYLEIPELPEYNNPIVHIYADEKVYWQVTDKELEKLLDPTI KILCLVNPSNPPSVKISDLVLEKIAYIIDNHRSDLMIITDDVYATFSDDFESLFSKCAYNTLCVYSFSKYFGATGWRIGT IALHKDNIFDKLISNLDDKKLDELDKHYSSLTTDSRTLKFIDRLVADSRSVALNHTAGISLPQQLQMGLFALSSLLDNQN IYRKEAKDLIRRRYNILYSSISPKLQQSLDENNVGYYTLLDLEELSYKIYDKDFSQWLIKNHSGPETLKILATETGIVLL PGKGFDVLHPSARVSLANLREYDYR >Mature_504_residues SQKDLSPFEFKDELIKLATSKADRLMLNAGRGNPNFLATIPRHAFLRLGDFALRESERSYSYLNNVFGGLPEKKGITERF DYYCLAHDKQDGIDFLRAAISFVDDHLGINKEEFLYEMTNAYLGCNYPSPPRILPIIEKIVMHYLREELYQNTDTPLEFD IFATEGGTAAMTYIFQSAKINGLLNAHDKIAMITPIFSPYLEIPELPEYNNPIVHIYADEKVYWQVTDKELEKLLDPTIK ILCLVNPSNPPSVKISDLVLEKIAYIIDNHRSDLMIITDDVYATFSDDFESLFSKCAYNTLCVYSFSKYFGATGWRIGTI ALHKDNIFDKLISNLDDKKLDELDKHYSSLTTDSRTLKFIDRLVADSRSVALNHTAGISLPQQLQMGLFALSSLLDNQNI YRKEAKDLIRRRYNILYSSISPKLQQSLDENNVGYYTLLDLEELSYKIYDKDFSQWLIKNHSGPETLKILATETGIVLLP GKGFDVLHPSARVSLANLREYDYR
Specific function: Unknown
COG id: COG0436
COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57865; Mature: 57733
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: PS00105 AA_TRANSFER_CLASS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQKDLSPFEFKDELIKLATSKADRLMLNAGRGNPNFLATIPRHAFLRLGDFALRESERS CCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHCHHH YSYLNNVFGGLPEKKGITERFDYYCLAHDKQDGIDFLRAAISFVDDHLGINKEEFLYEMT HHHHHHHHCCCCCCCCCHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH NAYLGCNYPSPPRILPIIEKIVMHYLREELYQNTDTPLEFDIFATEGGTAAMTYIFQSAK HCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEHHHHHHHHH INGLLNAHDKIAMITPIFSPYLEIPELPEYNNPIVHIYADEKVYWQVTDKELEKLLDPTI HCCEECCCCCEEEECHHHHHHCCCCCCCCCCCCEEEEEECCEEEEEECHHHHHHHHCCCE KILCLVNPSNPPSVKISDLVLEKIAYIIDNHRSDLMIITDDVYATFSDDFESLFSKCAYN EEEEEECCCCCCCEEHHHHHHHHHHHHHCCCCCCEEEEECCEEEEHHHHHHHHHHHHHCC TLCVYSFSKYFGATGWRIGTIALHKDNIFDKLISNLDDKKLDELDKHYSSLTTDSRTLKF HHHEEEHHHHHCCCCCEEEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHH IDRLVADSRSVALNHTAGISLPQQLQMGLFALSSLLDNQNIYRKEAKDLIRRRYNILYSS HHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH ISPKLQQSLDENNVGYYTLLDLEELSYKIYDKDFSQWLIKNHSGPETLKILATETGIVLL CCHHHHHHCCCCCCCEEEEEEHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEEECCCEEEE PGKGFDVLHPSARVSLANLREYDYR CCCCCCCCCCCHHEEHHHHHHCCCC >Mature Secondary Structure SQKDLSPFEFKDELIKLATSKADRLMLNAGRGNPNFLATIPRHAFLRLGDFALRESERS CCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHCHHH YSYLNNVFGGLPEKKGITERFDYYCLAHDKQDGIDFLRAAISFVDDHLGINKEEFLYEMT HHHHHHHHCCCCCCCCCHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH NAYLGCNYPSPPRILPIIEKIVMHYLREELYQNTDTPLEFDIFATEGGTAAMTYIFQSAK HCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEHHHHHHHHH INGLLNAHDKIAMITPIFSPYLEIPELPEYNNPIVHIYADEKVYWQVTDKELEKLLDPTI HCCEECCCCCEEEECHHHHHHCCCCCCCCCCCCEEEEEECCEEEEEECHHHHHHHHCCCE KILCLVNPSNPPSVKISDLVLEKIAYIIDNHRSDLMIITDDVYATFSDDFESLFSKCAYN EEEEEECCCCCCCEEHHHHHHHHHHHHHCCCCCCEEEEECCEEEEHHHHHHHHHHHHHCC TLCVYSFSKYFGATGWRIGTIALHKDNIFDKLISNLDDKKLDELDKHYSSLTTDSRTLKF HHHEEEHHHHHCCCCCEEEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHH IDRLVADSRSVALNHTAGISLPQQLQMGLFALSSLLDNQNIYRKEAKDLIRRRYNILYSS HHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH ISPKLQQSLDENNVGYYTLLDLEELSYKIYDKDFSQWLIKNHSGPETLKILATETGIVLL CCHHHHHHCCCCCCCEEEEEEHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEEECCCEEEE PGKGFDVLHPSARVSLANLREYDYR CCCCCCCCCCCHHEEHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA