Definition Francisella tularensis subsp. holarctica LVS chromosome, complete genome.
Accession NC_007880
Length 1,895,994

Click here to switch to the map view.

The map label for this gene is ypwA [H]

Identifier: 89255538

GI number: 89255538

Start: 95358

End: 96863

Strand: Reverse

Name: ypwA [H]

Synonym: FTL_0100

Alternate gene names: 89255538

Gene position: 96863-95358 (Counterclockwise)

Preceding gene: 89255539

Following gene: 89255537

Centisome position: 5.11

GC content: 31.14

Gene sequence:

>1506_bases
ATGAGCGCAATCAAAAGCCAACTCCAAATACTTCAGGACAAACTATCTCAAAAGAAGAAATATAATCACGCAATTTCTCT
AATGCACTGGGACTTAGAAACACAAGCCCCTAAAAACTCAATCAACACAACATCTGAAGTTATTGGGTTTTTCAGTGAAA
AAATCTATGAAATAACTAATAGTGAAGAAATAACTAGCAGCTTAAAGTATTTAAATAGCAACTTATCCGCGCTTGATGAG
ATTAACAAAAGAATTGTATACCTAACAACAAAACAAAAAGATAGGCTAAGTAAAATACCTAAAGATGAGTATGTTGCATA
CAATAAACTGCTATCACAAGCTCAAAATATTTGGGCAAAGGCTCGTAAAGATAATGACTTTGAAGCATTTGCTCCATATT
TAGAAGAAATTATAAAGTATCAAAAAAAGTATGTCGAAAGAATTGGCTATAATGAGCACCCCTATGATGTGCTTCTTGAT
GATTATGAAGAAGGTATGACTGTTGCAAAATTAGAACCTTTCTTTGACAGTCTAAAAGAAAGAATTGTACCTCTTCTAGA
AAAGATAAAAAACACTGATCAAGTTGATACAAGCTGTATTGATAAACCATATAATATTGATAAACAGAAAGAGTATTCTC
ACAAAATAGCTAAGAAACTAGGATTTAACTTTGATAGCGGTATTCTAAAAGAAAGTGCTCATCCATTTACTCTAAACTTC
AATAAATATGATGTCAGAATGACAACACACTATATTGAAAATCTTTTTACATCTTCATTATTTAGTACTATCTATGAAAC
AGGTCATGCCATGTATGAGCAAAATATCGGTGATAATATCTATGATACTATACTAGGCACTGGTGTTAGCTTAGGCATAC
ACGAATCACAATCACGATTTTATGAAAACTTAGTCGGTAAAAATAAAGCCTTTTGGGATAGAAACTATAGTGAACTACAA
GACTTATTTGCAGAAAATCTAGCTGATACTAGTATAGAAGAGTTTTATAAAGCAATAAATAAAGTTAGCCCTAGCCTAAT
CCGTGTAGAAGCGGATGAATTGACATATTCTCTACACATATTAGTACGCTTTGAAATAGAGAAAGAAATCTTTGAAAAAG
ATATTGATATTAGAGAGTTGCCAAAACTATGGAATGATAAATATCAAAAATATTTAGGTATTACTCCGTTTAATTTCTCT
GATGGAATATTACAAGATGTACATTGGTCAGCTGGTTTGTTCGGCTACTTTCCAACTTATGCTCTTGGTAGTGCCTATGC
TTCACAGATTTTTTATTATATGAATAAAGATTTTGATGTTAATGTCGCTATTAGAGATAACAAGCTAGAGCTTGTATTAG
GCTTTTTAACTAAGCATATACACCAGTTTGGTAGTCTAAAGCCTGCTGATGAGATTATCTATAATATGTGTGGAGAATAT
TTAAACGCTAAGTTTTATGTAGAGTATCTAGATGATAAGTTTACTAAAATTTACAATTTAAAATAA

Upstream 100 bases:

>100_bases
GCATCTATGCTGACCTATATTCATCATCAAAAACCAATATATGATACCCTATTAAGACGTACTATTTCTAACGAAAGAAA
ACAACAAGCAAAGGAAAAAA

Downstream 100 bases:

>100_bases
TATTCATATCCGCTACCTTTCTACTCTAGCCTTTAGGGTAAATATTAGTGATAATATAAGTATTAAAATTTAATCATAGT
ATTTAAATGTCAAAACTAAA

Product: carboxypeptidase,fragment

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 501; Mature: 500

Protein sequence:

>501_residues
MSAIKSQLQILQDKLSQKKKYNHAISLMHWDLETQAPKNSINTTSEVIGFFSEKIYEITNSEEITSSLKYLNSNLSALDE
INKRIVYLTTKQKDRLSKIPKDEYVAYNKLLSQAQNIWAKARKDNDFEAFAPYLEEIIKYQKKYVERIGYNEHPYDVLLD
DYEEGMTVAKLEPFFDSLKERIVPLLEKIKNTDQVDTSCIDKPYNIDKQKEYSHKIAKKLGFNFDSGILKESAHPFTLNF
NKYDVRMTTHYIENLFTSSLFSTIYETGHAMYEQNIGDNIYDTILGTGVSLGIHESQSRFYENLVGKNKAFWDRNYSELQ
DLFAENLADTSIEEFYKAINKVSPSLIRVEADELTYSLHILVRFEIEKEIFEKDIDIRELPKLWNDKYQKYLGITPFNFS
DGILQDVHWSAGLFGYFPTYALGSAYASQIFYYMNKDFDVNVAIRDNKLELVLGFLTKHIHQFGSLKPADEIIYNMCGEY
LNAKFYVEYLDDKFTKIYNLK

Sequences:

>Translated_501_residues
MSAIKSQLQILQDKLSQKKKYNHAISLMHWDLETQAPKNSINTTSEVIGFFSEKIYEITNSEEITSSLKYLNSNLSALDE
INKRIVYLTTKQKDRLSKIPKDEYVAYNKLLSQAQNIWAKARKDNDFEAFAPYLEEIIKYQKKYVERIGYNEHPYDVLLD
DYEEGMTVAKLEPFFDSLKERIVPLLEKIKNTDQVDTSCIDKPYNIDKQKEYSHKIAKKLGFNFDSGILKESAHPFTLNF
NKYDVRMTTHYIENLFTSSLFSTIYETGHAMYEQNIGDNIYDTILGTGVSLGIHESQSRFYENLVGKNKAFWDRNYSELQ
DLFAENLADTSIEEFYKAINKVSPSLIRVEADELTYSLHILVRFEIEKEIFEKDIDIRELPKLWNDKYQKYLGITPFNFS
DGILQDVHWSAGLFGYFPTYALGSAYASQIFYYMNKDFDVNVAIRDNKLELVLGFLTKHIHQFGSLKPADEIIYNMCGEY
LNAKFYVEYLDDKFTKIYNLK
>Mature_500_residues
SAIKSQLQILQDKLSQKKKYNHAISLMHWDLETQAPKNSINTTSEVIGFFSEKIYEITNSEEITSSLKYLNSNLSALDEI
NKRIVYLTTKQKDRLSKIPKDEYVAYNKLLSQAQNIWAKARKDNDFEAFAPYLEEIIKYQKKYVERIGYNEHPYDVLLDD
YEEGMTVAKLEPFFDSLKERIVPLLEKIKNTDQVDTSCIDKPYNIDKQKEYSHKIAKKLGFNFDSGILKESAHPFTLNFN
KYDVRMTTHYIENLFTSSLFSTIYETGHAMYEQNIGDNIYDTILGTGVSLGIHESQSRFYENLVGKNKAFWDRNYSELQD
LFAENLADTSIEEFYKAINKVSPSLIRVEADELTYSLHILVRFEIEKEIFEKDIDIRELPKLWNDKYQKYLGITPFNFSD
GILQDVHWSAGLFGYFPTYALGSAYASQIFYYMNKDFDVNVAIRDNKLELVLGFLTKHIHQFGSLKPADEIIYNMCGEYL
NAKFYVEYLDDKFTKIYNLK

Specific function: Unknown

COG id: COG2317

COG function: function code E; Zn-dependent carboxypeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M32 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001333 [H]

Pfam domain/function: PF02074 Peptidase_M32 [H]

EC number: NA

Molecular weight: Translated: 58577; Mature: 58446

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAIKSQLQILQDKLSQKKKYNHAISLMHWDLETQAPKNSINTTSEVIGFFSEKIYEITN
CHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
SEEITSSLKYLNSNLSALDEINKRIVYLTTKQKDRLSKIPKDEYVAYNKLLSQAQNIWAK
HHHHHHHHHHHHCCHHHHHHHCCEEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHH
ARKDNDFEAFAPYLEEIIKYQKKYVERIGYNEHPYDVLLDDYEEGMTVAKLEPFFDSLKE
HCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHH
RIVPLLEKIKNTDQVDTSCIDKPYNIDKQKEYSHKIAKKLGFNFDSGILKESAHPFTLNF
HHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCEEEEC
NKYDVRMTTHYIENLFTSSLFSTIYETGHAMYEQNIGDNIYDTILGTGVSLGIHESQSRF
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEECCCHHHHHH
YENLVGKNKAFWDRNYSELQDLFAENLADTSIEEFYKAINKVSPSLIRVEADELTYSLHI
HHHHHCCCCHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHEEEEHHHHEEEEEE
LVRFEIEKEIFEKDIDIRELPKLWNDKYQKYLGITPFNFSDGILQDVHWSAGLFGYFPTY
EEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHH
ALGSAYASQIFYYMNKDFDVNVAIRDNKLELVLGFLTKHIHQFGSLKPADEIIYNMCGEY
HHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LNAKFYVEYLDDKFTKIYNLK
HCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SAIKSQLQILQDKLSQKKKYNHAISLMHWDLETQAPKNSINTTSEVIGFFSEKIYEITN
HHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
SEEITSSLKYLNSNLSALDEINKRIVYLTTKQKDRLSKIPKDEYVAYNKLLSQAQNIWAK
HHHHHHHHHHHHCCHHHHHHHCCEEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHH
ARKDNDFEAFAPYLEEIIKYQKKYVERIGYNEHPYDVLLDDYEEGMTVAKLEPFFDSLKE
HCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHH
RIVPLLEKIKNTDQVDTSCIDKPYNIDKQKEYSHKIAKKLGFNFDSGILKESAHPFTLNF
HHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCEEEEC
NKYDVRMTTHYIENLFTSSLFSTIYETGHAMYEQNIGDNIYDTILGTGVSLGIHESQSRF
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEECCCHHHHHH
YENLVGKNKAFWDRNYSELQDLFAENLADTSIEEFYKAINKVSPSLIRVEADELTYSLHI
HHHHHCCCCHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHEEEEHHHHEEEEEE
LVRFEIEKEIFEKDIDIRELPKLWNDKYQKYLGITPFNFSDGILQDVHWSAGLFGYFPTY
EEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHH
ALGSAYASQIFYYMNKDFDVNVAIRDNKLELVLGFLTKHIHQFGSLKPADEIIYNMCGEY
HHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LNAKFYVEYLDDKFTKIYNLK
HCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]