| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is ypwA [H]
Identifier: 89255538
GI number: 89255538
Start: 95358
End: 96863
Strand: Reverse
Name: ypwA [H]
Synonym: FTL_0100
Alternate gene names: 89255538
Gene position: 96863-95358 (Counterclockwise)
Preceding gene: 89255539
Following gene: 89255537
Centisome position: 5.11
GC content: 31.14
Gene sequence:
>1506_bases ATGAGCGCAATCAAAAGCCAACTCCAAATACTTCAGGACAAACTATCTCAAAAGAAGAAATATAATCACGCAATTTCTCT AATGCACTGGGACTTAGAAACACAAGCCCCTAAAAACTCAATCAACACAACATCTGAAGTTATTGGGTTTTTCAGTGAAA AAATCTATGAAATAACTAATAGTGAAGAAATAACTAGCAGCTTAAAGTATTTAAATAGCAACTTATCCGCGCTTGATGAG ATTAACAAAAGAATTGTATACCTAACAACAAAACAAAAAGATAGGCTAAGTAAAATACCTAAAGATGAGTATGTTGCATA CAATAAACTGCTATCACAAGCTCAAAATATTTGGGCAAAGGCTCGTAAAGATAATGACTTTGAAGCATTTGCTCCATATT TAGAAGAAATTATAAAGTATCAAAAAAAGTATGTCGAAAGAATTGGCTATAATGAGCACCCCTATGATGTGCTTCTTGAT GATTATGAAGAAGGTATGACTGTTGCAAAATTAGAACCTTTCTTTGACAGTCTAAAAGAAAGAATTGTACCTCTTCTAGA AAAGATAAAAAACACTGATCAAGTTGATACAAGCTGTATTGATAAACCATATAATATTGATAAACAGAAAGAGTATTCTC ACAAAATAGCTAAGAAACTAGGATTTAACTTTGATAGCGGTATTCTAAAAGAAAGTGCTCATCCATTTACTCTAAACTTC AATAAATATGATGTCAGAATGACAACACACTATATTGAAAATCTTTTTACATCTTCATTATTTAGTACTATCTATGAAAC AGGTCATGCCATGTATGAGCAAAATATCGGTGATAATATCTATGATACTATACTAGGCACTGGTGTTAGCTTAGGCATAC ACGAATCACAATCACGATTTTATGAAAACTTAGTCGGTAAAAATAAAGCCTTTTGGGATAGAAACTATAGTGAACTACAA GACTTATTTGCAGAAAATCTAGCTGATACTAGTATAGAAGAGTTTTATAAAGCAATAAATAAAGTTAGCCCTAGCCTAAT CCGTGTAGAAGCGGATGAATTGACATATTCTCTACACATATTAGTACGCTTTGAAATAGAGAAAGAAATCTTTGAAAAAG ATATTGATATTAGAGAGTTGCCAAAACTATGGAATGATAAATATCAAAAATATTTAGGTATTACTCCGTTTAATTTCTCT GATGGAATATTACAAGATGTACATTGGTCAGCTGGTTTGTTCGGCTACTTTCCAACTTATGCTCTTGGTAGTGCCTATGC TTCACAGATTTTTTATTATATGAATAAAGATTTTGATGTTAATGTCGCTATTAGAGATAACAAGCTAGAGCTTGTATTAG GCTTTTTAACTAAGCATATACACCAGTTTGGTAGTCTAAAGCCTGCTGATGAGATTATCTATAATATGTGTGGAGAATAT TTAAACGCTAAGTTTTATGTAGAGTATCTAGATGATAAGTTTACTAAAATTTACAATTTAAAATAA
Upstream 100 bases:
>100_bases GCATCTATGCTGACCTATATTCATCATCAAAAACCAATATATGATACCCTATTAAGACGTACTATTTCTAACGAAAGAAA ACAACAAGCAAAGGAAAAAA
Downstream 100 bases:
>100_bases TATTCATATCCGCTACCTTTCTACTCTAGCCTTTAGGGTAAATATTAGTGATAATATAAGTATTAAAATTTAATCATAGT ATTTAAATGTCAAAACTAAA
Product: carboxypeptidase,fragment
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 501; Mature: 500
Protein sequence:
>501_residues MSAIKSQLQILQDKLSQKKKYNHAISLMHWDLETQAPKNSINTTSEVIGFFSEKIYEITNSEEITSSLKYLNSNLSALDE INKRIVYLTTKQKDRLSKIPKDEYVAYNKLLSQAQNIWAKARKDNDFEAFAPYLEEIIKYQKKYVERIGYNEHPYDVLLD DYEEGMTVAKLEPFFDSLKERIVPLLEKIKNTDQVDTSCIDKPYNIDKQKEYSHKIAKKLGFNFDSGILKESAHPFTLNF NKYDVRMTTHYIENLFTSSLFSTIYETGHAMYEQNIGDNIYDTILGTGVSLGIHESQSRFYENLVGKNKAFWDRNYSELQ DLFAENLADTSIEEFYKAINKVSPSLIRVEADELTYSLHILVRFEIEKEIFEKDIDIRELPKLWNDKYQKYLGITPFNFS DGILQDVHWSAGLFGYFPTYALGSAYASQIFYYMNKDFDVNVAIRDNKLELVLGFLTKHIHQFGSLKPADEIIYNMCGEY LNAKFYVEYLDDKFTKIYNLK
Sequences:
>Translated_501_residues MSAIKSQLQILQDKLSQKKKYNHAISLMHWDLETQAPKNSINTTSEVIGFFSEKIYEITNSEEITSSLKYLNSNLSALDE INKRIVYLTTKQKDRLSKIPKDEYVAYNKLLSQAQNIWAKARKDNDFEAFAPYLEEIIKYQKKYVERIGYNEHPYDVLLD DYEEGMTVAKLEPFFDSLKERIVPLLEKIKNTDQVDTSCIDKPYNIDKQKEYSHKIAKKLGFNFDSGILKESAHPFTLNF NKYDVRMTTHYIENLFTSSLFSTIYETGHAMYEQNIGDNIYDTILGTGVSLGIHESQSRFYENLVGKNKAFWDRNYSELQ DLFAENLADTSIEEFYKAINKVSPSLIRVEADELTYSLHILVRFEIEKEIFEKDIDIRELPKLWNDKYQKYLGITPFNFS DGILQDVHWSAGLFGYFPTYALGSAYASQIFYYMNKDFDVNVAIRDNKLELVLGFLTKHIHQFGSLKPADEIIYNMCGEY LNAKFYVEYLDDKFTKIYNLK >Mature_500_residues SAIKSQLQILQDKLSQKKKYNHAISLMHWDLETQAPKNSINTTSEVIGFFSEKIYEITNSEEITSSLKYLNSNLSALDEI NKRIVYLTTKQKDRLSKIPKDEYVAYNKLLSQAQNIWAKARKDNDFEAFAPYLEEIIKYQKKYVERIGYNEHPYDVLLDD YEEGMTVAKLEPFFDSLKERIVPLLEKIKNTDQVDTSCIDKPYNIDKQKEYSHKIAKKLGFNFDSGILKESAHPFTLNFN KYDVRMTTHYIENLFTSSLFSTIYETGHAMYEQNIGDNIYDTILGTGVSLGIHESQSRFYENLVGKNKAFWDRNYSELQD LFAENLADTSIEEFYKAINKVSPSLIRVEADELTYSLHILVRFEIEKEIFEKDIDIRELPKLWNDKYQKYLGITPFNFSD GILQDVHWSAGLFGYFPTYALGSAYASQIFYYMNKDFDVNVAIRDNKLELVLGFLTKHIHQFGSLKPADEIIYNMCGEYL NAKFYVEYLDDKFTKIYNLK
Specific function: Unknown
COG id: COG2317
COG function: function code E; Zn-dependent carboxypeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M32 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001333 [H]
Pfam domain/function: PF02074 Peptidase_M32 [H]
EC number: NA
Molecular weight: Translated: 58577; Mature: 58446
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAIKSQLQILQDKLSQKKKYNHAISLMHWDLETQAPKNSINTTSEVIGFFSEKIYEITN CHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCC SEEITSSLKYLNSNLSALDEINKRIVYLTTKQKDRLSKIPKDEYVAYNKLLSQAQNIWAK HHHHHHHHHHHHCCHHHHHHHCCEEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHH ARKDNDFEAFAPYLEEIIKYQKKYVERIGYNEHPYDVLLDDYEEGMTVAKLEPFFDSLKE HCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHH RIVPLLEKIKNTDQVDTSCIDKPYNIDKQKEYSHKIAKKLGFNFDSGILKESAHPFTLNF HHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCEEEEC NKYDVRMTTHYIENLFTSSLFSTIYETGHAMYEQNIGDNIYDTILGTGVSLGIHESQSRF CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEECCCHHHHHH YENLVGKNKAFWDRNYSELQDLFAENLADTSIEEFYKAINKVSPSLIRVEADELTYSLHI HHHHHCCCCHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHEEEEHHHHEEEEEE LVRFEIEKEIFEKDIDIRELPKLWNDKYQKYLGITPFNFSDGILQDVHWSAGLFGYFPTY EEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHH ALGSAYASQIFYYMNKDFDVNVAIRDNKLELVLGFLTKHIHQFGSLKPADEIIYNMCGEY HHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LNAKFYVEYLDDKFTKIYNLK HCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SAIKSQLQILQDKLSQKKKYNHAISLMHWDLETQAPKNSINTTSEVIGFFSEKIYEITN HHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCC SEEITSSLKYLNSNLSALDEINKRIVYLTTKQKDRLSKIPKDEYVAYNKLLSQAQNIWAK HHHHHHHHHHHHCCHHHHHHHCCEEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHH ARKDNDFEAFAPYLEEIIKYQKKYVERIGYNEHPYDVLLDDYEEGMTVAKLEPFFDSLKE HCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHH RIVPLLEKIKNTDQVDTSCIDKPYNIDKQKEYSHKIAKKLGFNFDSGILKESAHPFTLNF HHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCEEEEC NKYDVRMTTHYIENLFTSSLFSTIYETGHAMYEQNIGDNIYDTILGTGVSLGIHESQSRF CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEECCCHHHHHH YENLVGKNKAFWDRNYSELQDLFAENLADTSIEEFYKAINKVSPSLIRVEADELTYSLHI HHHHHCCCCHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHEEEEHHHHEEEEEE LVRFEIEKEIFEKDIDIRELPKLWNDKYQKYLGITPFNFSDGILQDVHWSAGLFGYFPTY EEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHH ALGSAYASQIFYYMNKDFDVNVAIRDNKLELVLGFLTKHIHQFGSLKPADEIIYNMCGEY HHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LNAKFYVEYLDDKFTKIYNLK HCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8760912; 9384377 [H]