| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89255499
Identifier: 89255499
GI number: 89255499
Start: 52734
End: 53273
Strand: Reverse
Name: 89255499
Synonym: FTL_0052
Alternate gene names: NA
Gene position: 53273-52734 (Counterclockwise)
Preceding gene: 89255500
Following gene: 89255498
Centisome position: 2.81
GC content: 29.07
Gene sequence:
>540_bases ATGAACTGTTGGGAAGACTATAAAAACCGAGCTAAAGACGATTCGGCTGGGGCAATGAGTTTAATCAGACAGCTTAAAGT AAAGAAAGATAAGCTTTTATCTTATCCTGTAGATGACTATAAAAACCTTAGAAATAAGACTATAGAAATCAAAAACTTTG ATCAAGACATTACTCTGCCTTCAAATCTAATAGAACTAAATTTAGATTTTAGCTCGGATAATAACTGGCAACTAGATCTT TTAGAGAATAATCAAGGATTTGTGATTAATATTCATTATCAAGATAATCAGATATTAGTGAAAAATAGCCTTAATGAAGT TATAGATAAAGCTTTTATAAAAGATATCCGCTCGCAAGAAATATCTGTAGATATTTTCTTAGATACAACTAGTATCGAGC TTTTTGTTAATAAGGAAGAAGAATCAATTACTATGAGATTTGAAGCATCTGATACAATAAAAAATACTATGAGAGTATCA GCTGTAAACCAAGATGATCTAACTATCAAATTATATGAACTAAATTCAGTATGGAAATAA
Upstream 100 bases:
>100_bases ATGGTAAGCATTTCTCTGCAGAAACACCTCCTACTCTGCAAAAGAGTTTTATGCACCACAGACTTTTGAAGCTAATGGTA ATAGATGCGCTATCGGTTGG
Downstream 100 bases:
>100_bases AAAACAGAGAATTTACAGATGGCATCAATTAATACAAATAACCAGTTATCTACCTTTATTGGTCCTGATAATTTAAAACT AAAAGCTGTTAGTATCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MNCWEDYKNRAKDDSAGAMSLIRQLKVKKDKLLSYPVDDYKNLRNKTIEIKNFDQDITLPSNLIELNLDFSSDNNWQLDL LENNQGFVINIHYQDNQILVKNSLNEVIDKAFIKDIRSQEISVDIFLDTTSIELFVNKEEESITMRFEASDTIKNTMRVS AVNQDDLTIKLYELNSVWK
Sequences:
>Translated_179_residues MNCWEDYKNRAKDDSAGAMSLIRQLKVKKDKLLSYPVDDYKNLRNKTIEIKNFDQDITLPSNLIELNLDFSSDNNWQLDL LENNQGFVINIHYQDNQILVKNSLNEVIDKAFIKDIRSQEISVDIFLDTTSIELFVNKEEESITMRFEASDTIKNTMRVS AVNQDDLTIKLYELNSVWK >Mature_179_residues MNCWEDYKNRAKDDSAGAMSLIRQLKVKKDKLLSYPVDDYKNLRNKTIEIKNFDQDITLPSNLIELNLDFSSDNNWQLDL LENNQGFVINIHYQDNQILVKNSLNEVIDKAFIKDIRSQEISVDIFLDTTSIELFVNKEEESITMRFEASDTIKNTMRVS AVNQDDLTIKLYELNSVWK
Specific function: Unknown
COG id: COG1621
COG function: function code G; Beta-fructosidases (levanase/invertase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.2.1.26
Molecular weight: Translated: 20933; Mature: 20933
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNCWEDYKNRAKDDSAGAMSLIRQLKVKKDKLLSYPVDDYKNLRNKTIEIKNFDQDITLP CCCHHHHHHCCCCCCHHHHHHHHHHHCCHHHHCCCCCHHHHHHHCCEEEEECCCCCCCCC SNLIELNLDFSSDNNWQLDLLENNQGFVINIHYQDNQILVKNSLNEVIDKAFIKDIRSQE CCEEEEEEEECCCCCEEEEEEECCCCEEEEEEECCCEEEEECCHHHHHHHHHHHHHCCCE ISVDIFLDTTSIELFVNKEEESITMRFEASDTIKNTMRVSAVNQDDLTIKLYELNSVWK EEEEEEEECCEEEEEEECCCCEEEEEEECCHHHHHCEEEEEECCCCCEEEEEECCCCCC >Mature Secondary Structure MNCWEDYKNRAKDDSAGAMSLIRQLKVKKDKLLSYPVDDYKNLRNKTIEIKNFDQDITLP CCCHHHHHHCCCCCCHHHHHHHHHHHCCHHHHCCCCCHHHHHHHCCEEEEECCCCCCCCC SNLIELNLDFSSDNNWQLDLLENNQGFVINIHYQDNQILVKNSLNEVIDKAFIKDIRSQE CCEEEEEEEECCCCCEEEEEEECCCCEEEEEEECCCEEEEECCHHHHHHHHHHHHHCCCE ISVDIFLDTTSIELFVNKEEESITMRFEASDTIKNTMRVSAVNQDDLTIKLYELNSVWK EEEEEEEECCEEEEEEECCCCEEEEEEECCHHHHHCEEEEEECCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA