Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89056656

Identifier: 89056656

GI number: 89056656

Start: 4274409

End: 4275260

Strand: Direct

Name: 89056656

Synonym: Jann_4165

Alternate gene names: NA

Gene position: 4274409-4275260 (Clockwise)

Preceding gene: 89056655

Following gene: 89056657

Centisome position: 98.99

GC content: 60.68

Gene sequence:

>852_bases
ATGAAATGGTGTTCTTCGATGTCTGACCCCAAACCCTGCATCATCTGTGTGGCCATCACCGGCTCTGTGCCCACAAAGGC
CGCAAACCCTGCCGTTCCGATCACGGTAGCCGAACAGATCGAGTCCACCCATGCCGCGTTTGAGGCGGGCGCGGCCATCT
GCCATGCCCATGTCCGCAACGATGATGAAACACCCTCCTCGGACCCCGAAAAGTTCGCCCGCCTGAAAGAGGGCGTTGAG
GGGCATTGTCCCGGTATGATTGTCCAACTTTCCACTGGCGGGAGGTCGGGCGCGAGCAAGGAACGGGGTGGGATGCTCCC
CTTGCGGCCCGATATGGCGTCGCTGTCTGTGGGCTCAAACAACTTCCCCACCCGCGTCTATGAGAACCCGCCCGACCTGG
TCGATTGGCTGGCCGCCGAGATGCGCACGTATGACATAAAGCCCGAGATTGAGGCCTTTGACCTCAGCCATATTCACCAT
GCCGCCCTGATGCATCAACGGGGGCAGTTGGCCGGCCACCCCTATGTGCAATTCGTCATGGGCGTCAAAAATGCCATGCC
CGCCGACCGGGAGACATTTGATTTCTATGTCGCGACCATGACGCGGTTGTTGCCTGAGTCCGAGTGGTGTGCGGCAGGCA
TTGGGCCCAACCAGATCGTCCTGAACGAATGGGCCATTGCAGCGGGTGGCCATGCGCGGACTGGATTGGAAGATAACGTG
CGCTGGGACAAACAGACCCTCGCGCCGTCCAATGCTGCGTTGGTCGAGCGCACGGCTGAGATCTGCGAAAAGAACGGGCG
ACCGGTGGCCACGACGGCACAGGCGCGAGAGATATTGGGCCTGCGTACCTAG

Upstream 100 bases:

>100_bases
GACCCTGTGTTACAGGGCCTTGATCTCGAGCGACGCGCAACCCTAATTGCCGCGCGCGACGGCACGACTTACCGCCTCGA
CATCCGTGTTCAGGGCGACA

Downstream 100 bases:

>100_bases
GGGTGGCGCAAGTTGACAGACCGATAGGCCCTGTGAATATGTCGCCCATGGCCGTCGCGCCCCCCCAATCCGAGAAAGAA
CAGCAGATCGCCGCCGCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MKWCSSMSDPKPCIICVAITGSVPTKAANPAVPITVAEQIESTHAAFEAGAAICHAHVRNDDETPSSDPEKFARLKEGVE
GHCPGMIVQLSTGGRSGASKERGGMLPLRPDMASLSVGSNNFPTRVYENPPDLVDWLAAEMRTYDIKPEIEAFDLSHIHH
AALMHQRGQLAGHPYVQFVMGVKNAMPADRETFDFYVATMTRLLPESEWCAAGIGPNQIVLNEWAIAAGGHARTGLEDNV
RWDKQTLAPSNAALVERTAEICEKNGRPVATTAQAREILGLRT

Sequences:

>Translated_283_residues
MKWCSSMSDPKPCIICVAITGSVPTKAANPAVPITVAEQIESTHAAFEAGAAICHAHVRNDDETPSSDPEKFARLKEGVE
GHCPGMIVQLSTGGRSGASKERGGMLPLRPDMASLSVGSNNFPTRVYENPPDLVDWLAAEMRTYDIKPEIEAFDLSHIHH
AALMHQRGQLAGHPYVQFVMGVKNAMPADRETFDFYVATMTRLLPESEWCAAGIGPNQIVLNEWAIAAGGHARTGLEDNV
RWDKQTLAPSNAALVERTAEICEKNGRPVATTAQAREILGLRT
>Mature_283_residues
MKWCSSMSDPKPCIICVAITGSVPTKAANPAVPITVAEQIESTHAAFEAGAAICHAHVRNDDETPSSDPEKFARLKEGVE
GHCPGMIVQLSTGGRSGASKERGGMLPLRPDMASLSVGSNNFPTRVYENPPDLVDWLAAEMRTYDIKPEIEAFDLSHIHH
AALMHQRGQLAGHPYVQFVMGVKNAMPADRETFDFYVATMTRLLPESEWCAAGIGPNQIVLNEWAIAAGGHARTGLEDNV
RWDKQTLAPSNAALVERTAEICEKNGRPVATTAQAREILGLRT

Specific function: Unknown

COG id: COG3246

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30636; Mature: 30636

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWCSSMSDPKPCIICVAITGSVPTKAANPAVPITVAEQIESTHAAFEAGAAICHAHVRN
CCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
DDETPSSDPEKFARLKEGVEGHCPGMIVQLSTGGRSGASKERGGMLPLRPDMASLSVGSN
CCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHCCCCCCCCCCHHHEECCCC
NFPTRVYENPPDLVDWLAAEMRTYDIKPEIEAFDLSHIHHAALMHQRGQLAGHPYVQFVM
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHH
GVKNAMPADRETFDFYVATMTRLLPESEWCAAGIGPNQIVLNEWAIAAGGHARTGLEDNV
HHHHCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCEEEEECEEEECCCCCCCCCCCCC
RWDKQTLAPSNAALVERTAEICEKNGRPVATTAQAREILGLRT
CCCHHHCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCC
>Mature Secondary Structure
MKWCSSMSDPKPCIICVAITGSVPTKAANPAVPITVAEQIESTHAAFEAGAAICHAHVRN
CCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
DDETPSSDPEKFARLKEGVEGHCPGMIVQLSTGGRSGASKERGGMLPLRPDMASLSVGSN
CCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHCCCCCCCCCCHHHEECCCC
NFPTRVYENPPDLVDWLAAEMRTYDIKPEIEAFDLSHIHHAALMHQRGQLAGHPYVQFVM
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHH
GVKNAMPADRETFDFYVATMTRLLPESEWCAAGIGPNQIVLNEWAIAAGGHARTGLEDNV
HHHHCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCEEEEECEEEECCCCCCCCCCCCC
RWDKQTLAPSNAALVERTAEICEKNGRPVATTAQAREILGLRT
CCCHHHCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA