Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89056644

Identifier: 89056644

GI number: 89056644

Start: 4265152

End: 4265751

Strand: Direct

Name: 89056644

Synonym: Jann_4153

Alternate gene names: NA

Gene position: 4265152-4265751 (Clockwise)

Preceding gene: 89056642

Following gene: 89056645

Centisome position: 98.78

GC content: 62.67

Gene sequence:

>600_bases
ATGCAGCCAGAGATTCGGAAGATCGTCACCTATGATGAGGAGGTCTTGATCGAAGGCTTCCGCAAAGCCGATGCACCCTG
GCGCATGTTCGCAATTGCCTGCGTGGTGCGGAACCCCTGGGCGGGTCGTTTCGTGGAGGATCTTAAGCCCGAGATCATGG
CCTATGGCCCCGTTTTGGGGGAACTGATGACCGAGCGCATGATCACGCTGGCAGGCTCTGGCGATGCGATTGAAGCCTAC
GGCAAGGCCGCAATCGTCGGCGTGGACGGAGAGGTGGAGCATGCCTCCGGCCTGATCCACACGTTGCGGTTCGGGAACTT
TTTCCGGGAGGCGGTCGGCGCGAATTCGTACCTCGCCTTCACCAACACCCGCGGCCCGGCCAATGCACCGATCATGGTGC
CGCTGATGGACAAGAATGACGCCGGGCGCAGGTCCCATTACCTGACGATCCAGTTTGCGATCCCCGATGCCCCCCGCGCG
GACGAGATCGTCGTTTTGCTGGGGGCGGCGACGTCCGGAAGGCCCCATCACCGCATCGGCGACCGTTACCAAGACCTCAA
GGACCTGGGCCATGACCTGGACAACCCGGCCGCGGTCTGA

Upstream 100 bases:

>100_bases
CAATCTTGCCATTAACGACGCTAATGGCAATGGCGCGGAATTCCTCGTTTGTCAAAATCCCGGATCACCCCGACGGTGCA
CCCGGAGCGGGAGAGCCCAG

Downstream 100 bases:

>100_bases
ATTCGGCCCGCTTCAGGCGGTCCGTGCAGGCGCGGGACCATGCGTCGTGTTATTGCACGGCGTGGGCCTGCGGGCCGAGG
CCTGGGGCGCACAGATCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MQPEIRKIVTYDEEVLIEGFRKADAPWRMFAIACVVRNPWAGRFVEDLKPEIMAYGPVLGELMTERMITLAGSGDAIEAY
GKAAIVGVDGEVEHASGLIHTLRFGNFFREAVGANSYLAFTNTRGPANAPIMVPLMDKNDAGRRSHYLTIQFAIPDAPRA
DEIVVLLGAATSGRPHHRIGDRYQDLKDLGHDLDNPAAV

Sequences:

>Translated_199_residues
MQPEIRKIVTYDEEVLIEGFRKADAPWRMFAIACVVRNPWAGRFVEDLKPEIMAYGPVLGELMTERMITLAGSGDAIEAY
GKAAIVGVDGEVEHASGLIHTLRFGNFFREAVGANSYLAFTNTRGPANAPIMVPLMDKNDAGRRSHYLTIQFAIPDAPRA
DEIVVLLGAATSGRPHHRIGDRYQDLKDLGHDLDNPAAV
>Mature_199_residues
MQPEIRKIVTYDEEVLIEGFRKADAPWRMFAIACVVRNPWAGRFVEDLKPEIMAYGPVLGELMTERMITLAGSGDAIEAY
GKAAIVGVDGEVEHASGLIHTLRFGNFFREAVGANSYLAFTNTRGPANAPIMVPLMDKNDAGRRSHYLTIQFAIPDAPRA
DEIVVLLGAATSGRPHHRIGDRYQDLKDLGHDLDNPAAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21859; Mature: 21859

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPEIRKIVTYDEEVLIEGFRKADAPWRMFAIACVVRNPWAGRFVEDLKPEIMAYGPVLG
CCCHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHCCHHHEEHHHHHH
ELMTERMITLAGSGDAIEAYGKAAIVGVDGEVEHASGLIHTLRFGNFFREAVGANSYLAF
HHHHHHHEEEECCCCEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEE
TNTRGPANAPIMVPLMDKNDAGRRSHYLTIQFAIPDAPRADEIVVLLGAATSGRPHHRIG
ECCCCCCCCCEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCHHHH
DRYQDLKDLGHDLDNPAAV
HHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MQPEIRKIVTYDEEVLIEGFRKADAPWRMFAIACVVRNPWAGRFVEDLKPEIMAYGPVLG
CCCHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHCCHHHEEHHHHHH
ELMTERMITLAGSGDAIEAYGKAAIVGVDGEVEHASGLIHTLRFGNFFREAVGANSYLAF
HHHHHHHEEEECCCCEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEE
TNTRGPANAPIMVPLMDKNDAGRRSHYLTIQFAIPDAPRADEIVVLLGAATSGRPHHRIG
ECCCCCCCCCEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCHHHH
DRYQDLKDLGHDLDNPAAV
HHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA