| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89056636
Identifier: 89056636
GI number: 89056636
Start: 4255395
End: 4257467
Strand: Direct
Name: 89056636
Synonym: Jann_4145
Alternate gene names: NA
Gene position: 4255395-4257467 (Clockwise)
Preceding gene: 89056635
Following gene: 89056637
Centisome position: 98.55
GC content: 61.6
Gene sequence:
>2073_bases ATGAGACAGGACAATAAAATCTTACCGTCCGACAGCGAAGCTGCGATGCTGGCGACCACATGGCAGGGCCTTTCGCCCTT GGCGCGTGACATTCGCAAGTTGGGCCAGGCTCTCGACCACCTCAAACGGGCGGGTGACAATTTCCACGAGGGACAGATTG ACACGCTGCGCCGGACCTTGCGCGAGTTTGAGCCGTCGGTGACACTGATTGGCCAGGTGAAGGCGGGCAAGACTTCCCTT GTGAATGCCCTGGCGGGCGGGCGCGATCTGCTCCCCTCCGACATCAACCCGTGGACCTCTGTCGTCACGTCGCTCCACCA ATCGCCGATTCTGACCGGAGCAAATGAGCGCGCGAGCTTCAGCTTTTTCAGTGAGGACGAATGGACTTCGCTTCTGCGGT CCGGAGGGCGCGTCGGGGAGCTGGCCAGCCGCGCCGGAGCCGATAGTGAACTGGAAAAAGTGCGCCAACAGCTCGACGAA ATGCGGCAGGCCTCGCGCCAAAGGCTTGGCGACCGTTTTGAGATGCTGCTGGGGCAAACCCACGATTATCGCTACGTCGA CGCCGAGTTGGTGCAGCGATACGTTTGTCTGGGGGATGCCACCGATCAAGGCGAGCCCGCAGATCAAAAGCAGGGTCGGT TCGCAGACATCACGCGATCTGCGGACATATTTGTCAGCCGTCCCTCCCTTCCTGTTCCGGTGTGCTTGCGGGACACGCCG GGCGTGAACGACACATTCATGGTGCGCGAACAAATTACGCTGAAAGCGATCCGCGGCAGTCGCCTTTGTGTGGTGGTGCT GTCCGCTCATCAGGCGCTTTCGAATGTCGATCTGGCGCTTGTGCGGATGATCGCCAACGTGCCCGCCCGCGATCTCATTA TCTTCATCAACCGGGTCGACGATCTTACGGACCCGGCCCAAGAGATCCCGGAGATTGAGCGCAGCGTTCGAGCCACGCTC GCGCGCTACAACGTGTCTGAGGACGCCCAACTCCTGTTCGGCAGTGCCAAGTGGGCCCTTGCGGCCGCATCGGGGAACCT GAACCAGATGGGACAGGCAAGTGCCGAAGCGCTATTGAATTGGGCACGGTATCAGGCTCTGCACGGGACGCTCGACAAAG ATCCCCTCGGCATGGTTTGGGCCCTGTCCGGCCTTCCGGCGCTTGGCGCCGCTATCTCGGACCGCGTCATCGCCGGAGAA GGCGCTGAGGTGATCGCCGGGGTCGCCAGCGGCGCCCGCAATGCGATTGGAGCGATTGCAGCCTCTCGCGCCATTGCCGA AAAGCGCGTGATGGAGGGGCAGTTGGCGCAGGTCGATGGTGCCGCCACAATAGCGACCGTCGATCAGATCACCGCAGATG CGGACGCCCGGTTCGCGGCAGACCTGGACCACGTGTTGAAGGGCCTGGATCTGCGCCTGCAAAAGGCCCAGGACAGTTTC GGCGCGCGCGCGACTGATGCCTTGATTGAGCATCTCGAAACCGTGGGCGAAGACGTCGAGTGGACGTATGATCCCACCGG CCTGCGGCTGCTTCTGGAGTCGGGCTACAACGTCTTCACCGCCAAAGCCCAGAAGCTCGCAGAGGATACATATCTGCGCA ACGCAACTGCAACGCGACAGCTGTTTCTTGATAAGTTCGGGCTAAGTGATGTCGGATTTGACCTTGAACCGCCCGCAGTG CCGCCCCCGCCTGTGCCGGTCATGTTGGGTCAGACGATCGCGCTCGACATCAAGGGCAGTTGGTGGACTCGCTGGTGGCG CCGCAAACGCAGCTACATCGCCTACGCTGACGAATTCCGGGCCTTGATTGACGCTGAAATCGCGCCGGTCCTAACGGCAC TAAGGGAAGATCACGCCGAAGGACACGTCCAGGCCCTACGAGATATCCTGACCCGTTTCACCACCGAGCAACGCGACGTG ATAGTCGGTCTGGCTGGCCAGGATCGATCCGATCTCAACCGGCTGCGGCGCGAAACGGCGGAGATTGCCGACGCGAAAGC GGAAGAACTGGACAGCGCGCGCGCGCAACTCGCCTCGATTGGGACTGGCGACATATTGAGGGACCGCACATGA
Upstream 100 bases:
>100_bases AGTTCGAAAACGGAGCAGACCAGGCGAAAGACGCCGCAGCCCTCCTTTACCAAATGCGCTGCGAAATCGAGCGGGTACTT TTTCCGCAACCGGAGACCCC
Downstream 100 bases:
>100_bases CCGATGCAGCAGCGACCCCCACCGCTCCACACAGCCAAAAACCGCGCGTTCTGCTCCTCGGTGAATTCAGCGCAGGCAAA AGCACTCTGGCCAACATCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 690; Mature: 690
Protein sequence:
>690_residues MRQDNKILPSDSEAAMLATTWQGLSPLARDIRKLGQALDHLKRAGDNFHEGQIDTLRRTLREFEPSVTLIGQVKAGKTSL VNALAGGRDLLPSDINPWTSVVTSLHQSPILTGANERASFSFFSEDEWTSLLRSGGRVGELASRAGADSELEKVRQQLDE MRQASRQRLGDRFEMLLGQTHDYRYVDAELVQRYVCLGDATDQGEPADQKQGRFADITRSADIFVSRPSLPVPVCLRDTP GVNDTFMVREQITLKAIRGSRLCVVVLSAHQALSNVDLALVRMIANVPARDLIIFINRVDDLTDPAQEIPEIERSVRATL ARYNVSEDAQLLFGSAKWALAAASGNLNQMGQASAEALLNWARYQALHGTLDKDPLGMVWALSGLPALGAAISDRVIAGE GAEVIAGVASGARNAIGAIAASRAIAEKRVMEGQLAQVDGAATIATVDQITADADARFAADLDHVLKGLDLRLQKAQDSF GARATDALIEHLETVGEDVEWTYDPTGLRLLLESGYNVFTAKAQKLAEDTYLRNATATRQLFLDKFGLSDVGFDLEPPAV PPPPVPVMLGQTIALDIKGSWWTRWWRRKRSYIAYADEFRALIDAEIAPVLTALREDHAEGHVQALRDILTRFTTEQRDV IVGLAGQDRSDLNRLRRETAEIADAKAEELDSARAQLASIGTGDILRDRT
Sequences:
>Translated_690_residues MRQDNKILPSDSEAAMLATTWQGLSPLARDIRKLGQALDHLKRAGDNFHEGQIDTLRRTLREFEPSVTLIGQVKAGKTSL VNALAGGRDLLPSDINPWTSVVTSLHQSPILTGANERASFSFFSEDEWTSLLRSGGRVGELASRAGADSELEKVRQQLDE MRQASRQRLGDRFEMLLGQTHDYRYVDAELVQRYVCLGDATDQGEPADQKQGRFADITRSADIFVSRPSLPVPVCLRDTP GVNDTFMVREQITLKAIRGSRLCVVVLSAHQALSNVDLALVRMIANVPARDLIIFINRVDDLTDPAQEIPEIERSVRATL ARYNVSEDAQLLFGSAKWALAAASGNLNQMGQASAEALLNWARYQALHGTLDKDPLGMVWALSGLPALGAAISDRVIAGE GAEVIAGVASGARNAIGAIAASRAIAEKRVMEGQLAQVDGAATIATVDQITADADARFAADLDHVLKGLDLRLQKAQDSF GARATDALIEHLETVGEDVEWTYDPTGLRLLLESGYNVFTAKAQKLAEDTYLRNATATRQLFLDKFGLSDVGFDLEPPAV PPPPVPVMLGQTIALDIKGSWWTRWWRRKRSYIAYADEFRALIDAEIAPVLTALREDHAEGHVQALRDILTRFTTEQRDV IVGLAGQDRSDLNRLRRETAEIADAKAEELDSARAQLASIGTGDILRDRT >Mature_690_residues MRQDNKILPSDSEAAMLATTWQGLSPLARDIRKLGQALDHLKRAGDNFHEGQIDTLRRTLREFEPSVTLIGQVKAGKTSL VNALAGGRDLLPSDINPWTSVVTSLHQSPILTGANERASFSFFSEDEWTSLLRSGGRVGELASRAGADSELEKVRQQLDE MRQASRQRLGDRFEMLLGQTHDYRYVDAELVQRYVCLGDATDQGEPADQKQGRFADITRSADIFVSRPSLPVPVCLRDTP GVNDTFMVREQITLKAIRGSRLCVVVLSAHQALSNVDLALVRMIANVPARDLIIFINRVDDLTDPAQEIPEIERSVRATL ARYNVSEDAQLLFGSAKWALAAASGNLNQMGQASAEALLNWARYQALHGTLDKDPLGMVWALSGLPALGAAISDRVIAGE GAEVIAGVASGARNAIGAIAASRAIAEKRVMEGQLAQVDGAATIATVDQITADADARFAADLDHVLKGLDLRLQKAQDSF GARATDALIEHLETVGEDVEWTYDPTGLRLLLESGYNVFTAKAQKLAEDTYLRNATATRQLFLDKFGLSDVGFDLEPPAV PPPPVPVMLGQTIALDIKGSWWTRWWRRKRSYIAYADEFRALIDAEIAPVLTALREDHAEGHVQALRDILTRFTTEQRDV IVGLAGQDRSDLNRLRRETAEIADAKAEELDSARAQLASIGTGDILRDRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75496; Mature: 75496
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQDNKILPSDSEAAMLATTWQGLSPLARDIRKLGQALDHLKRAGDNFHEGQIDTLRRTL CCCCCCCCCCCCCCEEEEHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH REFEPSVTLIGQVKAGKTSLVNALAGGRDLLPSDINPWTSVVTSLHQSPILTGANERASF HHCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCE SFFSEDEWTSLLRSGGRVGELASRAGADSELEKVRQQLDEMRQASRQRLGDRFEMLLGQT ECCCCHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC HDYRYVDAELVQRYVCLGDATDQGEPADQKQGRFADITRSADIFVSRPSLPVPVCLRDTP CCCEEECHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHCCCCCEEEECCCCCCEEEECCCC GVNDTFMVREQITLKAIRGSRLCVVVLSAHQALSNVDLALVRMIANVPARDLIIFINRVD CCCCEEEEHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEHHC DLTDPAQEIPEIERSVRATLARYNVSEDAQLLFGSAKWALAAASGNLNQMGQASAEALLN CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHEECCCCEEEEECCCCHHHHHHHHHHHHHH WARYQALHGTLDKDPLGMVWALSGLPALGAAISDRVIAGEGAEVIAGVASGARNAIGAIA HHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHH ASRAIAEKRVMEGQLAQVDGAATIATVDQITADADARFAADLDHVLKGLDLRLQKAQDSF HHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC GARATDALIEHLETVGEDVEWTYDPTGLRLLLESGYNVFTAKAQKLAEDTYLRNATATRQ CCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHCCCCEEHHHHHHHHHHHHHHCHHHHHH LFLDKFGLSDVGFDLEPPAVPPPPVPVMLGQTIALDIKGSWWTRWWRRKRSYIAYADEFR HHHHHCCCCCCCCCCCCCCCCCCCCCEECCCEEEEEECCCHHHHHHHHHHCHHHHHHHHH ALIDAEIAPVLTALREDHAEGHVQALRDILTRFTTEQRDVIVGLAGQDRSDLNRLRRETA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHH EIADAKAEELDSARAQLASIGTGDILRDRT HHHHHHHHHHHHHHHHHHHCCCCCHHCCCC >Mature Secondary Structure MRQDNKILPSDSEAAMLATTWQGLSPLARDIRKLGQALDHLKRAGDNFHEGQIDTLRRTL CCCCCCCCCCCCCCEEEEHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH REFEPSVTLIGQVKAGKTSLVNALAGGRDLLPSDINPWTSVVTSLHQSPILTGANERASF HHCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCE SFFSEDEWTSLLRSGGRVGELASRAGADSELEKVRQQLDEMRQASRQRLGDRFEMLLGQT ECCCCHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC HDYRYVDAELVQRYVCLGDATDQGEPADQKQGRFADITRSADIFVSRPSLPVPVCLRDTP CCCEEECHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHCCCCCEEEECCCCCCEEEECCCC GVNDTFMVREQITLKAIRGSRLCVVVLSAHQALSNVDLALVRMIANVPARDLIIFINRVD CCCCEEEEHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEHHC DLTDPAQEIPEIERSVRATLARYNVSEDAQLLFGSAKWALAAASGNLNQMGQASAEALLN CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHEECCCCEEEEECCCCHHHHHHHHHHHHHH WARYQALHGTLDKDPLGMVWALSGLPALGAAISDRVIAGEGAEVIAGVASGARNAIGAIA HHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHH ASRAIAEKRVMEGQLAQVDGAATIATVDQITADADARFAADLDHVLKGLDLRLQKAQDSF HHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC GARATDALIEHLETVGEDVEWTYDPTGLRLLLESGYNVFTAKAQKLAEDTYLRNATATRQ CCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHCCCCEEHHHHHHHHHHHHHHCHHHHHH LFLDKFGLSDVGFDLEPPAVPPPPVPVMLGQTIALDIKGSWWTRWWRRKRSYIAYADEFR HHHHHCCCCCCCCCCCCCCCCCCCCCEECCCEEEEEECCCHHHHHHHHHHCHHHHHHHHH ALIDAEIAPVLTALREDHAEGHVQALRDILTRFTTEQRDVIVGLAGQDRSDLNRLRRETA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHH EIADAKAEELDSARAQLASIGTGDILRDRT HHHHHHHHHHHHHHHHHHHCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA