Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89056635

Identifier: 89056635

GI number: 89056635

Start: 4254235

End: 4255398

Strand: Direct

Name: 89056635

Synonym: Jann_4144

Alternate gene names: NA

Gene position: 4254235-4255398 (Clockwise)

Preceding gene: 89056634

Following gene: 89056636

Centisome position: 98.52

GC content: 62.63

Gene sequence:

>1164_bases
ATGCACGCGCTGCACCCCAACTCAGAAGACGCCCTTGCGCAGCTTGGATTGCTGGCGAAGTCTGACAGGCTTCCGGCGCG
GGAAGCGGCGCGGTGCGCGCAATTGGTCGATGTGTTGCGGCGGCCAGCTCGCGTCTGTGTTGTCGGGCAAGACGTGAACG
TCATCCGCGCGATGCTGACCGCCCTGATCGGTGAACACGCCACGATCGCAAGCGACACTCTGCCCCCGGCTCTGGAATTG
GCCCATGGTGCCACGGTCCGAACGCGCCTGACCCTGGAGGACGGCACGACCCTGAACCACGAAGGCGCACCGACCGATGA
TCTGCTAACGCAAGCACCGCTGTTCATGCAGCTTGAGTTACCAAGTCCCTTGCTGCGCGATATGTCCATCCTTGTGCTGT
TGCTCGACAGAGATCCGAGAGTGCATCGCCCGGCCTTGTCTTGGGCCGCGCGGCGCACGGAAATTGCCGTGTGGTGCACC
TCGCGATTCTCCCGGTTGGACGCGCAGATCTGGTCCCACGTCCCGCAGCGGTTGTCGCATCACGCTTACCTTGTGGAGAC
GCGATCCGGCGATGTGACTGCCGCTGCACGAGGCAGCTTCACTGACCATTTGCATCTGCCAATCGGGCCAGATCCGACCC
TCCGCGATCTTGAACCCCTGATTGCGCGCTTAAGTGACGATATCGTGGACGGACGCTTGGCCGATCTCGACTCTGCCCAG
ATGCTGCTGCATCGGCTTGGCCATCTGCAACTACGTCCGACGACGGCCGGCGAAACTGACCCGGTTGGTGCAACAAGACC
GTCCGAAGACGTTGCCCGCCTGCGCCGCATCCTGTCCGAGCCAGTCTTGTTTCTGCAACGACGCGCGGGCGCGCTGGCCG
AAGACCTCGCATGGGCGGACGTTGAGGGGGACGATGATTGGCCAGCCAAGATCCGCAGTGGTTGCCTGGCGACGGCCGAA
GGGCTTCGCGATCGCGCGCAGTCCTGGCCCGACGACATGTCCGTCCTCCAAAGTCTGAGCGCCTTCACAGAGGAAGTGTG
CGACGCCTTCTTGTTGCTTGAGTTCGAAAACGGAGCAGACCAGGCGAAAGACGCCGCAGCCCTCCTTTACCAAATGCGCT
GCGAAATCGAGCGGGTACTTTTTCCGCAACCGGAGACCCCATGA

Upstream 100 bases:

>100_bases
CACGGAAAGGGATACTCGGCCGCGGATCGGGTGCCATGGTGAAAGCACTCCGTCGCGCCGTGAAACCCGCCGTCGTCCCG
GCACCGGGACAAAGCTGACG

Downstream 100 bases:

>100_bases
GACAGGACAATAAAATCTTACCGTCCGACAGCGAAGCTGCGATGCTGGCGACCACATGGCAGGGCCTTTCGCCCTTGGCG
CGTGACATTCGCAAGTTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MHALHPNSEDALAQLGLLAKSDRLPAREAARCAQLVDVLRRPARVCVVGQDVNVIRAMLTALIGEHATIASDTLPPALEL
AHGATVRTRLTLEDGTTLNHEGAPTDDLLTQAPLFMQLELPSPLLRDMSILVLLLDRDPRVHRPALSWAARRTEIAVWCT
SRFSRLDAQIWSHVPQRLSHHAYLVETRSGDVTAAARGSFTDHLHLPIGPDPTLRDLEPLIARLSDDIVDGRLADLDSAQ
MLLHRLGHLQLRPTTAGETDPVGATRPSEDVARLRRILSEPVLFLQRRAGALAEDLAWADVEGDDDWPAKIRSGCLATAE
GLRDRAQSWPDDMSVLQSLSAFTEEVCDAFLLLEFENGADQAKDAAALLYQMRCEIERVLFPQPETP

Sequences:

>Translated_387_residues
MHALHPNSEDALAQLGLLAKSDRLPAREAARCAQLVDVLRRPARVCVVGQDVNVIRAMLTALIGEHATIASDTLPPALEL
AHGATVRTRLTLEDGTTLNHEGAPTDDLLTQAPLFMQLELPSPLLRDMSILVLLLDRDPRVHRPALSWAARRTEIAVWCT
SRFSRLDAQIWSHVPQRLSHHAYLVETRSGDVTAAARGSFTDHLHLPIGPDPTLRDLEPLIARLSDDIVDGRLADLDSAQ
MLLHRLGHLQLRPTTAGETDPVGATRPSEDVARLRRILSEPVLFLQRRAGALAEDLAWADVEGDDDWPAKIRSGCLATAE
GLRDRAQSWPDDMSVLQSLSAFTEEVCDAFLLLEFENGADQAKDAAALLYQMRCEIERVLFPQPETP
>Mature_387_residues
MHALHPNSEDALAQLGLLAKSDRLPAREAARCAQLVDVLRRPARVCVVGQDVNVIRAMLTALIGEHATIASDTLPPALEL
AHGATVRTRLTLEDGTTLNHEGAPTDDLLTQAPLFMQLELPSPLLRDMSILVLLLDRDPRVHRPALSWAARRTEIAVWCT
SRFSRLDAQIWSHVPQRLSHHAYLVETRSGDVTAAARGSFTDHLHLPIGPDPTLRDLEPLIARLSDDIVDGRLADLDSAQ
MLLHRLGHLQLRPTTAGETDPVGATRPSEDVARLRRILSEPVLFLQRRAGALAEDLAWADVEGDDDWPAKIRSGCLATAE
GLRDRAQSWPDDMSVLQSLSAFTEEVCDAFLLLEFENGADQAKDAAALLYQMRCEIERVLFPQPETP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42648; Mature: 42648

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHALHPNSEDALAQLGLLAKSDRLPAREAARCAQLVDVLRRPARVCVVGQDVNVIRAMLT
CCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHH
ALIGEHATIASDTLPPALELAHGATVRTRLTLEDGTTLNHEGAPTDDLLTQAPLFMQLEL
HHHCCCCHHCCCCCCHHHHHHCCCEEEEEEEECCCCEECCCCCCCHHHHHCCCCEEEEEC
PSPLLRDMSILVLLLDRDPRVHRPALSWAARRTEIAVWCTSRFSRLDAQIWSHVPQRLSH
CCHHHHHHHHEEEEECCCCCCCCHHHHHHHHHCEEEEEHHHHHHHHHHHHHHHHHHHHCC
HAYLVETRSGDVTAAARGSFTDHLHLPIGPDPTLRDLEPLIARLSDDIVDGRLADLDSAQ
CEEEEEECCCCEEEEECCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHCCCHHH
MLLHRLGHLQLRPTTAGETDPVGATRPSEDVARLRRILSEPVLFLQRRAGALAEDLAWAD
HHHHHHCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCC
VEGDDDWPAKIRSGCLATAEGLRDRAQSWPDDMSVLQSLSAFTEEVCDAFLLLEFENGAD
CCCCCCCHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCC
QAKDAAALLYQMRCEIERVLFPQPETP
HHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MHALHPNSEDALAQLGLLAKSDRLPAREAARCAQLVDVLRRPARVCVVGQDVNVIRAMLT
CCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHH
ALIGEHATIASDTLPPALELAHGATVRTRLTLEDGTTLNHEGAPTDDLLTQAPLFMQLEL
HHHCCCCHHCCCCCCHHHHHHCCCEEEEEEEECCCCEECCCCCCCHHHHHCCCCEEEEEC
PSPLLRDMSILVLLLDRDPRVHRPALSWAARRTEIAVWCTSRFSRLDAQIWSHVPQRLSH
CCHHHHHHHHEEEEECCCCCCCCHHHHHHHHHCEEEEEHHHHHHHHHHHHHHHHHHHHCC
HAYLVETRSGDVTAAARGSFTDHLHLPIGPDPTLRDLEPLIARLSDDIVDGRLADLDSAQ
CEEEEEECCCCEEEEECCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHCCCHHH
MLLHRLGHLQLRPTTAGETDPVGATRPSEDVARLRRILSEPVLFLQRRAGALAEDLAWAD
HHHHHHCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCC
VEGDDDWPAKIRSGCLATAEGLRDRAQSWPDDMSVLQSLSAFTEEVCDAFLLLEFENGAD
CCCCCCCHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCC
QAKDAAALLYQMRCEIERVLFPQPETP
HHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA