Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89056567

Identifier: 89056567

GI number: 89056567

Start: 4183328

End: 4183756

Strand: Direct

Name: 89056567

Synonym: Jann_4076

Alternate gene names: NA

Gene position: 4183328-4183756 (Clockwise)

Preceding gene: 89056566

Following gene: 161898393

Centisome position: 96.88

GC content: 65.73

Gene sequence:

>429_bases
ATGCGCTTTCTTCCAACTCTGGCCCTCTGCATGGGCCTTGCAGGCCTTGGCGGGATCACCCCCCCGGCCGAGGCCCAGAC
CACCGCAACCGCCATTGCCTCCGGCCAATTCCAGGACACAGGCCCGCGCTACCAGGGGTCCGGCTCAGCGGTGATCGCGC
AAACATCTGACGGGCAGACGGTGCTGCAATTCGGTGACTTCTCTGTCACACCGGGCCCGGATCTGGAGGTTTGGCTGGTC
GAGGCCGACGCGCCCACAAGCGCCGCGGCGGTGCTGGCCAGCAGCTATATCTCGCTGGGGCCGCTGCAATCCGCAACGGG
AGGGCAAACGTATGGCATCCCGTCCGATATCGACGCCTCCGCCTATGGCAGCGTGGTGATCTGGTGCGAAGATTTCAGCG
TGCTGTTCTCCGTCGCGCCGCTGCGCTGA

Upstream 100 bases:

>100_bases
ACGACATGGATCACGGGCCAATCCCACAGATGTGAATGGCGTTGGACGGCGACCTGCGGCTAGCGTCCCTTTGACAGACC
GCTATCCAAAGGGACACATC

Downstream 100 bases:

>100_bases
CCACCTAGGGGCGGGGTTAGCCTCGCCCTACAGCCCGCCCATCTTGCAGACGATCTTCCATTCTGCGTCTGTGACGGGCT
GTACCGAGAGACGCGCGCTC

Product: putative secreted protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MRFLPTLALCMGLAGLGGITPPAEAQTTATAIASGQFQDTGPRYQGSGSAVIAQTSDGQTVLQFGDFSVTPGPDLEVWLV
EADAPTSAAAVLASSYISLGPLQSATGGQTYGIPSDIDASAYGSVVIWCEDFSVLFSVAPLR

Sequences:

>Translated_142_residues
MRFLPTLALCMGLAGLGGITPPAEAQTTATAIASGQFQDTGPRYQGSGSAVIAQTSDGQTVLQFGDFSVTPGPDLEVWLV
EADAPTSAAAVLASSYISLGPLQSATGGQTYGIPSDIDASAYGSVVIWCEDFSVLFSVAPLR
>Mature_142_residues
MRFLPTLALCMGLAGLGGITPPAEAQTTATAIASGQFQDTGPRYQGSGSAVIAQTSDGQTVLQFGDFSVTPGPDLEVWLV
EADAPTSAAAVLASSYISLGPLQSATGGQTYGIPSDIDASAYGSVVIWCEDFSVLFSVAPLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14462; Mature: 14462

Theoretical pI: Translated: 3.58; Mature: 3.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFLPTLALCMGLAGLGGITPPAEAQTTATAIASGQFQDTGPRYQGSGSAVIAQTSDGQT
CCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHEECCCCCCCCCCCCCCCCEEEEECCCCCE
VLQFGDFSVTPGPDLEVWLVEADAPTSAAAVLASSYISLGPLQSATGGQTYGIPSDIDAS
EEEECCEECCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
AYGSVVIWCEDFSVLFSVAPLR
CCCCEEEEECCCEEEEEECCCC
>Mature Secondary Structure
MRFLPTLALCMGLAGLGGITPPAEAQTTATAIASGQFQDTGPRYQGSGSAVIAQTSDGQT
CCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHEECCCCCCCCCCCCCCCCEEEEECCCCCE
VLQFGDFSVTPGPDLEVWLVEADAPTSAAAVLASSYISLGPLQSATGGQTYGIPSDIDAS
EEEECCEECCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
AYGSVVIWCEDFSVLFSVAPLR
CCCCEEEEECCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA