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The map label for this gene is regA [H]

Identifier: 89056559

GI number: 89056559

Start: 4176586

End: 4177146

Strand: Direct

Name: regA [H]

Synonym: Jann_4068

Alternate gene names: 89056559

Gene position: 4176586-4177146 (Clockwise)

Preceding gene: 89056558

Following gene: 89056560

Centisome position: 96.73

GC content: 65.24

Gene sequence:

>561_bases
ATGGCCACGCCAGACCGCAGCCTGAGAGACATCGGACCCGATAAGTCTCTGCTGCTGATCGACGATGACGAGCCGTTTCT
GCGCAGGCTGGAACGGGCGATGGAAAAGCGCGGCTTTGATGTGGAGGCGGCGGGATCTGTAGCCGCCGGCACCGCCATCG
CCACCGCGCGTCCGCCCGCCTATGCGGTCATTGATTTGCGGCTGGAGGACGGCAACGGCCTCGACGTGGTGGAGACGCTG
CGCGAAAAGCGCCCCGATGCGCGGATCGTTGTGCTGACAGGCTACGGCGCGATTGCGACGGCTGTCGCTGCGGTGAAGAT
GGGGGCGACGGATTACCTGTCCAAGCCCGCCGACGCCAACGACATCACCTCCGCGCTATTGGCCGAAGAGGAAGAGATGC
CGCCCCCGCCGGAAAACCCGATGTCCGCAGACCGTGTGCGGTGGGAGCATATTCAGCGGGTCTATGAGCTGTGCGACCGC
AACGTCTCCGAGACGGCGCGGCGGCTGAACATGCACCGGCGGACGTTGCAACGTATCCTCGCCAAGCGCTCACCACGGTG
A

Upstream 100 bases:

>100_bases
CGCTTTTTTTGTGCCGGTATGCCAATCGTTTCAACTGCGACCGTTTGACCAATTCTCTTTCATTCCTATAACTTAGGTTA
GGACAAGAGGAGACGACCCA

Downstream 100 bases:

>100_bases
GGGGGGCTGCAAGTGCCTGCGCGCTGATTGCGCTGCTGGCAGGATGTGTGGGCGGAGGTCCCGGTCAGGTGGCCTCGGAC
GACAGCTACCGGTTGGATGC

Product: response regulator receiver domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MATPDRSLRDIGPDKSLLLIDDDEPFLRRLERAMEKRGFDVEAAGSVAAGTAIATARPPAYAVIDLRLEDGNGLDVVETL
REKRPDARIVVLTGYGAIATAVAAVKMGATDYLSKPADANDITSALLAEEEEMPPPPENPMSADRVRWEHIQRVYELCDR
NVSETARRLNMHRRTLQRILAKRSPR

Sequences:

>Translated_186_residues
MATPDRSLRDIGPDKSLLLIDDDEPFLRRLERAMEKRGFDVEAAGSVAAGTAIATARPPAYAVIDLRLEDGNGLDVVETL
REKRPDARIVVLTGYGAIATAVAAVKMGATDYLSKPADANDITSALLAEEEEMPPPPENPMSADRVRWEHIQRVYELCDR
NVSETARRLNMHRRTLQRILAKRSPR
>Mature_185_residues
ATPDRSLRDIGPDKSLLLIDDDEPFLRRLERAMEKRGFDVEAAGSVAAGTAIATARPPAYAVIDLRLEDGNGLDVVETLR
EKRPDARIVVLTGYGAIATAVAAVKMGATDYLSKPADANDITSALLAEEEEMPPPPENPMSADRVRWEHIQRVYELCDRN
VSETARRLNMHRRTLQRILAKRSPR

Specific function: Member of the two-component regulatory system regB/regA. Involved in transactivating anaerobic expression of the photosynthetic apparatus. It is a transcriptional regulator that is responsible for activating expression of the puf, puh, and puc operons in

COG id: COG4567

COG function: function code TK; Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR002197
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02954 HTH_8; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 20632; Mature: 20501

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATPDRSLRDIGPDKSLLLIDDDEPFLRRLERAMEKRGFDVEAAGSVAAGTAIATARPPA
CCCCCCCHHHCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCC
YAVIDLRLEDGNGLDVVETLREKRPDARIVVLTGYGAIATAVAAVKMGATDYLSKPADAN
EEEEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCHHHHCCCCCHH
DITSALLAEEEEMPPPPENPMSADRVRWEHIQRVYELCDRNVSETARRLNMHRRTLQRIL
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
AKRSPR
HHCCCC
>Mature Secondary Structure 
ATPDRSLRDIGPDKSLLLIDDDEPFLRRLERAMEKRGFDVEAAGSVAAGTAIATARPPA
CCCCCCHHHCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCC
YAVIDLRLEDGNGLDVVETLREKRPDARIVVLTGYGAIATAVAAVKMGATDYLSKPADAN
EEEEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCHHHHCCCCCHH
DITSALLAEEEEMPPPPENPMSADRVRWEHIQRVYELCDRNVSETARRLNMHRRTLQRIL
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
AKRSPR
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA