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The map label for this gene is chrR [H]

Identifier: 89056513

GI number: 89056513

Start: 4125403

End: 4126044

Strand: Direct

Name: chrR [H]

Synonym: Jann_4022

Alternate gene names: 89056513

Gene position: 4125403-4126044 (Clockwise)

Preceding gene: 89056512

Following gene: 89056514

Centisome position: 95.54

GC content: 64.17

Gene sequence:

>642_bases
ATGACTGAAATGAACCACTCCGTCCCCGACGACATGCTGATGGGCTATGCGTCCGGATCGCTTGCGAAAGCCTTCGATCT
GGTGCTGGCGACCCATGTGTCGCTGAACGATGACGCCCGCGCCCGGCTAGAGACGTTTGAAGCGCTTGGCGGCGCGATCC
TCTGCGGCATGGACACCGTTGATGTAGACGACGACAGCCTGGAACAGACGATGGCCAAGATCCGTGGCAATGCGCCAATT
GAACGGCCCGCGCCGTCCGAGGGCCTGTTCCCGACGCCCCTGCAATCCATGGTCGGTGGCGATGTGGATGCCGTGCGCTG
GCGCAGCGTTGGCGGCGGCGTGAAGCAATGTGTGCTGCATTCCGATGACGGCGGCACCGTCCGGCTTCTGTCGATTGCGG
CGGGCCGGGCCATGCCCGCCCACAGCCACCACGGAACGGAAATGACGCTTGTGCTGCAAGGCGCGTACCGGGACGACGAC
GGCATCTTCGCCCGGGGCGATCTGGAACTGGCGGACACCGACACCAACCACCAGCCAGTGGCCGAGCCCGGTCAGGATTG
TATCTGCCTTGTGGCCACCAACGCCAAGCTGAAGTTCCAGGGCCTGTTGCCGCGCATTGCTCAGCCCTTCCTCGGCATCT
GA

Upstream 100 bases:

>100_bases
CGGTTTGCCCCTTGGCACAATCAAGTCGCGGATTAGGTTAGCGCTCGATCGACTTAGACACTCGATGAATTGAAACGACC
ATAAAGAACGACACACGACC

Downstream 100 bases:

>100_bases
TCCGCTCGTGCGCCGCTTTGGTCCCACACGGGGCGAGCTGAAGCTGCGTCTGGCGATCAGTGTCGGCGGCCTCGCGCTCA
TGATCGCGGCCTATGCGAGC

Product: anti-sigm factor, ChrR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MTEMNHSVPDDMLMGYASGSLAKAFDLVLATHVSLNDDARARLETFEALGGAILCGMDTVDVDDDSLEQTMAKIRGNAPI
ERPAPSEGLFPTPLQSMVGGDVDAVRWRSVGGGVKQCVLHSDDGGTVRLLSIAAGRAMPAHSHHGTEMTLVLQGAYRDDD
GIFARGDLELADTDTNHQPVAEPGQDCICLVATNAKLKFQGLLPRIAQPFLGI

Sequences:

>Translated_213_residues
MTEMNHSVPDDMLMGYASGSLAKAFDLVLATHVSLNDDARARLETFEALGGAILCGMDTVDVDDDSLEQTMAKIRGNAPI
ERPAPSEGLFPTPLQSMVGGDVDAVRWRSVGGGVKQCVLHSDDGGTVRLLSIAAGRAMPAHSHHGTEMTLVLQGAYRDDD
GIFARGDLELADTDTNHQPVAEPGQDCICLVATNAKLKFQGLLPRIAQPFLGI
>Mature_212_residues
TEMNHSVPDDMLMGYASGSLAKAFDLVLATHVSLNDDARARLETFEALGGAILCGMDTVDVDDDSLEQTMAKIRGNAPIE
RPAPSEGLFPTPLQSMVGGDVDAVRWRSVGGGVKQCVLHSDDGGTVRLLSIAAGRAMPAHSHHGTEMTLVLQGAYRDDDG
IFARGDLELADTDTNHQPVAEPGQDCICLVATNAKLKFQGLLPRIAQPFLGI

Specific function: Anti-sigma factor that inhibits the activity of the extracytoplasmic function (ECF) sigma (E) factor, thereby indirectly regulating the transcription of the cycA and rpoE genes [H]

COG id: COG3806

COG function: function code T; Anti-sigma factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012807
- InterPro:   IPR011051
- InterPro:   IPR014710 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22625; Mature: 22494

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEMNHSVPDDMLMGYASGSLAKAFDLVLATHVSLNDDARARLETFEALGGAILCGMDTV
CCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEECCCCC
DVDDDSLEQTMAKIRGNAPIERPAPSEGLFPTPLQSMVGGDVDAVRWRSVGGGVKQCVLH
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCEEEEEE
SDDGGTVRLLSIAAGRAMPAHSHHGTEMTLVLQGAYRDDDGIFARGDLELADTDTNHQPV
CCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECEECCCCEEEECCEEEECCCCCCCCC
AEPGQDCICLVATNAKLKFQGLLPRIAQPFLGI
CCCCCCEEEEEECCCEEEEECCCHHHHHHHCCC
>Mature Secondary Structure 
TEMNHSVPDDMLMGYASGSLAKAFDLVLATHVSLNDDARARLETFEALGGAILCGMDTV
CCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEECCCCC
DVDDDSLEQTMAKIRGNAPIERPAPSEGLFPTPLQSMVGGDVDAVRWRSVGGGVKQCVLH
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCEEEEEE
SDDGGTVRLLSIAAGRAMPAHSHHGTEMTLVLQGAYRDDDGIFARGDLELADTDTNHQPV
CCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECEECCCCEEEECCEEEECCCCCCCCC
AEPGQDCICLVATNAKLKFQGLLPRIAQPFLGI
CCCCCCEEEEEECCCEEEEECCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7721683 [H]