Click here to switch to the map view.

The map label for this gene is 89056306

Identifier: 89056306

GI number: 89056306

Start: 3904070

End: 3905572

Strand: Direct

Name: 89056306

Synonym: Jann_3815

Alternate gene names: NA

Gene position: 3904070-3905572 (Clockwise)

Preceding gene: 89056305

Following gene: 89056307

Centisome position: 90.41

GC content: 64.94

Gene sequence:

>1503_bases
ATGACCCGCCCAAAGCACCGGATCGCCATCGCCGGGTTTCAGCACGAAACCAACAGCTTTTCGCCCACACCCGCGACCCT
TGCGGATTTTGAAATGGACGACAGCTGGCCCGGTCTGATGCGCGGGCCGGAGGTCATTGCCCGCACCCGGGGCATCAATC
TGGCCGTCGCCGGGTTCATTCTTGCCGCCGAGGCGGACGCCGATGTTGAAATCCTGCCGATCCTCTGGGCCTCGGCAGAA
CCCTCCGGCCCCGTCACCGACCATGCCTTCGACACCATTGCGGCTGAGATCTTAGCTGGCCTCAAAGCGGCGGGTCCCAT
CGACGGCCTCTTTCTGGACCTGCATGGCGCTATGATCACCGAGAGCCATGACGACGGTGAAGGCGCTTTGCTGGCGATGA
TCCGCGAGACCCTCGGCCCCGATCTGCCCATAGCAGTCAGCCTGGATCTGCATGCCAATATCTCGGACCAGATGGTAGAC
CTGTCCACGTCCATCGCGCTGTTTCGCACTTACCCGCACCTCGACATGGCGGATACCGGCGCACGGTGTTTTCCACAGCT
GCTAGCGCAGATCGAAGGCGCGCGGCCCTGCAAGGCCTTCGCCAATGTGCCGTTCCTGATCCCGCTTCACGCCCAATGCA
CCGATATGGCGCCTATGGGGCCGCTCTACGCCTTGGCTGAGCAGCACGGTGTAGAACTTGCAGCGGGGTTCACCGGTGGC
GACACGCGCCATACGTCTCCCTCCGTCCTGGCCTATGCCGACACGCAGGAGGAGGCGGACCGGGCCGTCGCGACGGTGAG
CGACGCCATGCTCGCCGTCGAACCCGCCTTCATCGGCACGCCCCCACCGCCCGAGGAGGTCGTGCGTCAGGCGATGGCAA
TGCCCATGGGCACGCCGGTCATCATCGCGGATGTGGAGGATAACCCGGGCGGCGGAGGGTCGTCTGACACAACGGGCCTC
TTGCGGGCCTTGGTCAGCGAAGGCGCGCAAGGGGCGCTTTTGGGTGTCCTGCATGACGCGGATGTCGCCAAGGCGGCCCA
TGACATCGGGGTCGGAGGCACCCTTGCGATGGACCTTGCCGGACGATCCGGCTGCGAGGGCGACGCCCCCTTCGAGGGAC
GCTTTCAGGTCATGGCGCTGAGCGACGGACGCGTAGTCTATGAGGGGGTCATGTATGGCGGAGGAGAGGCGCAGATCGGC
CCGTCCGCGCGTTTGAAGGTTCTGGATACCGCCGCCGATGTCCACGTGGTCGTCAGCACCATCCGCAACCAATGCCTCGA
CCGAGGATACTTCCGTGCTTTGGGGGTAAACCCCGAGGACGCCCGCATTGTTGCGATCAAAAGCACCGTCCATTTCCGGG
AAGCGTTCGAGCCGATGGCACAGGCGGTTCTGACCACCCGCGTGCCCGGCGCACTGGCCAGCGACCTCAGTCAAGCGCCC
TACCGCAACCTGCGACAGGGCGTCCGGATGGGGCCGGATGGATCCGCCTTTGAACGCGCTTAG

Upstream 100 bases:

>100_bases
TTGGATCATCGACGCCCGCATTGAAGCGACGGAGGATGATCAACCTTTTTTCAGCCGCGATTGGTCCCGGACCATCGCAC
GCGATCACATGTGATCTGCC

Downstream 100 bases:

>100_bases
GTCCCGGCTCTCCTGACATATCGCCCACAACCCATGCAACTAACAGTTGAAACACAGGGGATTGTAGGCAGAATGCCCTG
ACAAATTCATAACGGGCCGG

Product: MlrC-like

Products: NA

Alternate protein names: MlrC Domain-Containing Protein; MlrC Domain Protein; MlrC Family; Microcystin LR Degradation Protein MlrC; MlrC-Like; MlrC C-Terminus Family; MlrC Family Protein; Peptidase; MlrC C-Terminal Domain Family Protein; MlrC-Like Protein; Cytoplasmic Protein; Microcystin Lr Degradation Protein Mlrc-Like Protein; MlrC C-Terminus Family Protein; LOW QUALITY PROTEIN MlrC C-Terminus Superfamily Protein; Microcystin Lr Degradation Domain; MlrC C-Terminus Superfamily Protein

Number of amino acids: Translated: 500; Mature: 499

Protein sequence:

>500_residues
MTRPKHRIAIAGFQHETNSFSPTPATLADFEMDDSWPGLMRGPEVIARTRGINLAVAGFILAAEADADVEILPILWASAE
PSGPVTDHAFDTIAAEILAGLKAAGPIDGLFLDLHGAMITESHDDGEGALLAMIRETLGPDLPIAVSLDLHANISDQMVD
LSTSIALFRTYPHLDMADTGARCFPQLLAQIEGARPCKAFANVPFLIPLHAQCTDMAPMGPLYALAEQHGVELAAGFTGG
DTRHTSPSVLAYADTQEEADRAVATVSDAMLAVEPAFIGTPPPPEEVVRQAMAMPMGTPVIIADVEDNPGGGGSSDTTGL
LRALVSEGAQGALLGVLHDADVAKAAHDIGVGGTLAMDLAGRSGCEGDAPFEGRFQVMALSDGRVVYEGVMYGGGEAQIG
PSARLKVLDTAADVHVVVSTIRNQCLDRGYFRALGVNPEDARIVAIKSTVHFREAFEPMAQAVLTTRVPGALASDLSQAP
YRNLRQGVRMGPDGSAFERA

Sequences:

>Translated_500_residues
MTRPKHRIAIAGFQHETNSFSPTPATLADFEMDDSWPGLMRGPEVIARTRGINLAVAGFILAAEADADVEILPILWASAE
PSGPVTDHAFDTIAAEILAGLKAAGPIDGLFLDLHGAMITESHDDGEGALLAMIRETLGPDLPIAVSLDLHANISDQMVD
LSTSIALFRTYPHLDMADTGARCFPQLLAQIEGARPCKAFANVPFLIPLHAQCTDMAPMGPLYALAEQHGVELAAGFTGG
DTRHTSPSVLAYADTQEEADRAVATVSDAMLAVEPAFIGTPPPPEEVVRQAMAMPMGTPVIIADVEDNPGGGGSSDTTGL
LRALVSEGAQGALLGVLHDADVAKAAHDIGVGGTLAMDLAGRSGCEGDAPFEGRFQVMALSDGRVVYEGVMYGGGEAQIG
PSARLKVLDTAADVHVVVSTIRNQCLDRGYFRALGVNPEDARIVAIKSTVHFREAFEPMAQAVLTTRVPGALASDLSQAP
YRNLRQGVRMGPDGSAFERA
>Mature_499_residues
TRPKHRIAIAGFQHETNSFSPTPATLADFEMDDSWPGLMRGPEVIARTRGINLAVAGFILAAEADADVEILPILWASAEP
SGPVTDHAFDTIAAEILAGLKAAGPIDGLFLDLHGAMITESHDDGEGALLAMIRETLGPDLPIAVSLDLHANISDQMVDL
STSIALFRTYPHLDMADTGARCFPQLLAQIEGARPCKAFANVPFLIPLHAQCTDMAPMGPLYALAEQHGVELAAGFTGGD
TRHTSPSVLAYADTQEEADRAVATVSDAMLAVEPAFIGTPPPPEEVVRQAMAMPMGTPVIIADVEDNPGGGGSSDTTGLL
RALVSEGAQGALLGVLHDADVAKAAHDIGVGGTLAMDLAGRSGCEGDAPFEGRFQVMALSDGRVVYEGVMYGGGEAQIGP
SARLKVLDTAADVHVVVSTIRNQCLDRGYFRALGVNPEDARIVAIKSTVHFREAFEPMAQAVLTTRVPGALASDLSQAPY
RNLRQGVRMGPDGSAFERA

Specific function: Unknown

COG id: COG5476

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52456; Mature: 52325

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRPKHRIAIAGFQHETNSFSPTPATLADFEMDDSWPGLMRGPEVIARTRGINLAVAGFI
CCCCCCEEEEEEEECCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHCCCEEEEEEEE
LAAEADADVEILPILWASAEPSGPVTDHAFDTIAAEILAGLKAAGPIDGLFLDLHGAMIT
EEECCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEE
ESHDDGEGALLAMIRETLGPDLPIAVSLDLHANISDQMVDLSTSIALFRTYPHLDMADTG
CCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHEEEEEECCCCCCCCCC
ARCFPQLLAQIEGARPCKAFANVPFLIPLHAQCTDMAPMGPLYALAEQHGVELAAGFTGG
HHHHHHHHHHHCCCCCHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCEEEEECCCC
DTRHTSPSVLAYADTQEEADRAVATVSDAMLAVEPAFIGTPPPPEEVVRQAMAMPMGTPV
CCCCCCCCEEEEECCHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHCCCCCCE
IIADVEDNPGGGGSSDTTGLLRALVSEGAQGALLGVLHDADVAKAAHDIGVGGTLAMDLA
EEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHCCCCCEEEEEEC
GRSGCEGDAPFEGRFQVMALSDGRVVYEGVMYGGGEAQIGPSARLKVLDTAADVHVVVST
CCCCCCCCCCCCCCEEEEEEECCEEEEEEEEECCCCCCCCCCCEEEEEECHHHHHHHHHH
IRNQCLDRGYFRALGVNPEDARIVAIKSTVHFREAFEPMAQAVLTTRVPGALASDLSQAP
HHHHHHCCCCEEEECCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCH
YRNLRQGVRMGPDGSAFERA
HHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
TRPKHRIAIAGFQHETNSFSPTPATLADFEMDDSWPGLMRGPEVIARTRGINLAVAGFI
CCCCCEEEEEEEECCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHCCCEEEEEEEE
LAAEADADVEILPILWASAEPSGPVTDHAFDTIAAEILAGLKAAGPIDGLFLDLHGAMIT
EEECCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEE
ESHDDGEGALLAMIRETLGPDLPIAVSLDLHANISDQMVDLSTSIALFRTYPHLDMADTG
CCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHEEEEEECCCCCCCCCC
ARCFPQLLAQIEGARPCKAFANVPFLIPLHAQCTDMAPMGPLYALAEQHGVELAAGFTGG
HHHHHHHHHHHCCCCCHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCEEEEECCCC
DTRHTSPSVLAYADTQEEADRAVATVSDAMLAVEPAFIGTPPPPEEVVRQAMAMPMGTPV
CCCCCCCCEEEEECCHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHCCCCCCE
IIADVEDNPGGGGSSDTTGLLRALVSEGAQGALLGVLHDADVAKAAHDIGVGGTLAMDLA
EEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHCCCCCEEEEEEC
GRSGCEGDAPFEGRFQVMALSDGRVVYEGVMYGGGEAQIGPSARLKVLDTAADVHVVVST
CCCCCCCCCCCCCCEEEEEEECCEEEEEEEEECCCCCCCCCCCEEEEEECHHHHHHHHHH
IRNQCLDRGYFRALGVNPEDARIVAIKSTVHFREAFEPMAQAVLTTRVPGALASDLSQAP
HHHHHHCCCCEEEECCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCH
YRNLRQGVRMGPDGSAFERA
HHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA