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The map label for this gene is dppC [H]

Identifier: 89056297

GI number: 89056297

Start: 3891858

End: 3892697

Strand: Direct

Name: dppC [H]

Synonym: Jann_3806

Alternate gene names: 89056297

Gene position: 3891858-3892697 (Clockwise)

Preceding gene: 89056296

Following gene: 89056298

Centisome position: 90.13

GC content: 65.12

Gene sequence:

>840_bases
ATGACCCTCCTCCGCGCCCTTGCCCGCCACCCGGCAGGCCGCATCAGCCTTATCATCATCGGGTTGCTCAGCATCGCCGC
GCTGCTTGGGCTGTTTGGCCTGACGCCCCACGATCCACTTGCCCAGGACCGCCTCGCGCGCCTGCAAGCGCCCAGCAGCA
CATATGTTTTGGGAACCGACCTCTTTGGCCGGGACATGCTCAGCCGGTTGATGGTGGGGGCGGGGCAATCCTTCATGGTC
GCCCTGCTGTCCGTCACCCTCGCCGCGACGCTTGGCACGATCCTTGGGCTCACGGCGGCGTGGTTCGGCGGTCTCTGGGA
TGGGGTGGCGATGCGCCTGATGGATGTGCTGCTGGCTTTTCCCGCCATCCTTCTGGCCCTGCTGATCATCGCGATCCTTC
AAGCCGGTGTCCTGTCATCGGTGCTTGCCATCGCGGTCGTCTACACCCCGATCTTCACCCGTGTCGCGCGGGGCCCGGCG
CTGTCGATCAAGACGCGCAGCTTTGTCGATGCCGCGCGCACGTTTGGCAGCCCCACGACTTACATTCTGTCGCGTCATCT
GTTGGGCAACCTTGTGGCCCCGCTGACCGTGCAGTTCACGCTCGCCCTGGCCTGGGCACTGCTGACGGAGGCCGCACTCA
GCTTCCTCGGTCTCGGCACACAGCCGCCCAATCCATCCCTCGGCCTTATGCTGTCGGACAGCCGCAACCTGATGGAAATG
GCGCCGTGGCTGCTGATCTACCCCGCGGCCACGATCATGCTGGCGGTGCTGGGGTTCAATCTTCTGGGGGATGCTTTGCG
GGATATCACAGATCCGCGCGCGCAGGACGGTCGCCCATGA

Upstream 100 bases:

>100_bases
TTATCCTGTTCATCGCCTTCAATTTCATGGTGGTTAACCTGCTGGTCGATCTGGCCTACGCCGCCCTTGATCCGCGCATT
CGCTATGGCAGCGGCGGGTC

Downstream 100 bases:

>100_bases
CGCTGTTGTCCGTCACAGACCTGCGTGTTGGCTTCGGTGCAAAGGGGCAGGAGACCGAGGTTGTGCGCGGCGTCAGCTTT
GACGTCGCCGCCGGAGAGAC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MTLLRALARHPAGRISLIIIGLLSIAALLGLFGLTPHDPLAQDRLARLQAPSSTYVLGTDLFGRDMLSRLMVGAGQSFMV
ALLSVTLAATLGTILGLTAAWFGGLWDGVAMRLMDVLLAFPAILLALLIIAILQAGVLSSVLAIAVVYTPIFTRVARGPA
LSIKTRSFVDAARTFGSPTTYILSRHLLGNLVAPLTVQFTLALAWALLTEAALSFLGLGTQPPNPSLGLMLSDSRNLMEM
APWLLIYPAATIMLAVLGFNLLGDALRDITDPRAQDGRP

Sequences:

>Translated_279_residues
MTLLRALARHPAGRISLIIIGLLSIAALLGLFGLTPHDPLAQDRLARLQAPSSTYVLGTDLFGRDMLSRLMVGAGQSFMV
ALLSVTLAATLGTILGLTAAWFGGLWDGVAMRLMDVLLAFPAILLALLIIAILQAGVLSSVLAIAVVYTPIFTRVARGPA
LSIKTRSFVDAARTFGSPTTYILSRHLLGNLVAPLTVQFTLALAWALLTEAALSFLGLGTQPPNPSLGLMLSDSRNLMEM
APWLLIYPAATIMLAVLGFNLLGDALRDITDPRAQDGRP
>Mature_278_residues
TLLRALARHPAGRISLIIIGLLSIAALLGLFGLTPHDPLAQDRLARLQAPSSTYVLGTDLFGRDMLSRLMVGAGQSFMVA
LLSVTLAATLGTILGLTAAWFGGLWDGVAMRLMDVLLAFPAILLALLIIAILQAGVLSSVLAIAVVYTPIFTRVARGPAL
SIKTRSFVDAARTFGSPTTYILSRHLLGNLVAPLTVQFTLALAWALLTEAALSFLGLGTQPPNPSLGLMLSDSRNLMEMA
PWLLIYPAATIMLAVLGFNLLGDALRDITDPRAQDGRP

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=227, Percent_Identity=42.2907488986784, Blast_Score=194, Evalue=5e-51,
Organism=Escherichia coli, GI1787760, Length=241, Percent_Identity=40.2489626556017, Blast_Score=192, Evalue=3e-50,
Organism=Escherichia coli, GI1789964, Length=246, Percent_Identity=42.2764227642276, Blast_Score=152, Evalue=3e-38,
Organism=Escherichia coli, GI1787498, Length=224, Percent_Identity=37.5, Blast_Score=142, Evalue=3e-35,
Organism=Escherichia coli, GI1789889, Length=238, Percent_Identity=34.8739495798319, Blast_Score=141, Evalue=6e-35,
Organism=Escherichia coli, GI1787549, Length=215, Percent_Identity=39.5348837209302, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1788505, Length=228, Percent_Identity=31.140350877193, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29578; Mature: 29447

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLLRALARHPAGRISLIIIGLLSIAALLGLFGLTPHDPLAQDRLARLQAPSSTYVLGTD
CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEECH
LFGRDMLSRLMVGAGQSFMVALLSVTLAATLGTILGLTAAWFGGLWDGVAMRLMDVLLAF
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PAILLALLIIAILQAGVLSSVLAIAVVYTPIFTRVARGPALSIKTRSFVDAARTFGSPTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHH
YILSRHLLGNLVAPLTVQFTLALAWALLTEAALSFLGLGTQPPNPSLGLMLSDSRNLMEM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHH
APWLLIYPAATIMLAVLGFNLLGDALRDITDPRAQDGRP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TLLRALARHPAGRISLIIIGLLSIAALLGLFGLTPHDPLAQDRLARLQAPSSTYVLGTD
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEECH
LFGRDMLSRLMVGAGQSFMVALLSVTLAATLGTILGLTAAWFGGLWDGVAMRLMDVLLAF
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PAILLALLIIAILQAGVLSSVLAIAVVYTPIFTRVARGPALSIKTRSFVDAARTFGSPTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHH
YILSRHLLGNLVAPLTVQFTLALAWALLTEAALSFLGLGTQPPNPSLGLMLSDSRNLMEM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHH
APWLLIYPAATIMLAVLGFNLLGDALRDITDPRAQDGRP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]