Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89056161

Identifier: 89056161

GI number: 89056161

Start: 3747276

End: 3747614

Strand: Direct

Name: 89056161

Synonym: Jann_3670

Alternate gene names: NA

Gene position: 3747276-3747614 (Clockwise)

Preceding gene: 89056155

Following gene: 89056162

Centisome position: 86.78

GC content: 59.0

Gene sequence:

>339_bases
ATGAAATTCACGCTTGCCCTGCTTGCGGCAACCGCAAGCCTCACGTCATGGGCCATCGCGGCAGACCATCACATCATCAT
CCGAGGTATGAGCTTTCAGCCCAGCCATATGACAGTGTCAGTCGGCGACACGGTGATGGTCACAAACGCCGATGATCAGC
CGCACACAGTGACCGCCCTCGCGCGGGGCCTTGATACTGCGCAGGTGCAGGGCGGCGCGTTCGACACTGGGCTCATTGCC
CCCGATGACATGGTAGAGGTCAGGATCACTCGGTCGGGCGTGATTGATTTCTACTGTCAGTATCATCCGACCATGCTCGG
CCGCATCACCGCTGAATAG

Upstream 100 bases:

>100_bases
TCCCCAAGTTTTCCTCAGGTGACCGTCAAGCTTCGCCATCCCACTCAGTCTAAGCCGGTCTGGCGGCGCACCGCAAGTTG
TCACCAATGGAGTCACGATC

Downstream 100 bases:

>100_bases
CCTTCTCTCCATTTCAAAAATTTGACCCCAATCCGATAGGACATCCCATGACACGTTTTCGATCCACTCTGCCTCAGGTC
AACGGCACCACCCTGCTGAC

Product: blue (type1) copper domain-containing protein

Products: NA

Alternate protein names: Blue Copper Domain

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MKFTLALLAATASLTSWAIAADHHIIIRGMSFQPSHMTVSVGDTVMVTNADDQPHTVTALARGLDTAQVQGGAFDTGLIA
PDDMVEVRITRSGVIDFYCQYHPTMLGRITAE

Sequences:

>Translated_112_residues
MKFTLALLAATASLTSWAIAADHHIIIRGMSFQPSHMTVSVGDTVMVTNADDQPHTVTALARGLDTAQVQGGAFDTGLIA
PDDMVEVRITRSGVIDFYCQYHPTMLGRITAE
>Mature_112_residues
MKFTLALLAATASLTSWAIAADHHIIIRGMSFQPSHMTVSVGDTVMVTNADDQPHTVTALARGLDTAQVQGGAFDTGLIA
PDDMVEVRITRSGVIDFYCQYHPTMLGRITAE

Specific function: Unknown

COG id: COG3794

COG function: function code C; Plastocyanin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12033; Mature: 12033

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFTLALLAATASLTSWAIAADHHIIIRGMSFQPSHMTVSVGDTVMVTNADDQPHTVTAL
CEEEEEEEHHHHCCCEEEEECCCEEEEEECCCCCCEEEEEECCEEEEECCCCCCCCHHHH
ARGLDTAQVQGGAFDTGLIAPDDMVEVRITRSGVIDFYCQYHPTMLGRITAE
HCCCCCEEECCCCCCCCCCCCCCEEEEEEECCCEEEEEEECCCEEEEEEECC
>Mature Secondary Structure
MKFTLALLAATASLTSWAIAADHHIIIRGMSFQPSHMTVSVGDTVMVTNADDQPHTVTAL
CEEEEEEEHHHHCCCEEEEECCCEEEEEECCCCCCEEEEEECCEEEEECCCCCCCCHHHH
ARGLDTAQVQGGAFDTGLIAPDDMVEVRITRSGVIDFYCQYHPTMLGRITAE
HCCCCCEEECCCCCCCCCCCCCCEEEEEEECCCEEEEEEECCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA