Click here to switch to the map view.

The map label for this gene is 89056145

Identifier: 89056145

GI number: 89056145

Start: 3727114

End: 3728139

Strand: Direct

Name: 89056145

Synonym: Jann_3654

Alternate gene names: NA

Gene position: 3727114-3728139 (Clockwise)

Preceding gene: 89056144

Following gene: 89056146

Centisome position: 86.32

GC content: 63.94

Gene sequence:

>1026_bases
ATGGCTGACCAAACCCTTATCCCGCGCGTCCTGCCCCAGATCTGGGGCCGCATCGACAAGGTCGCCCTGACCTTCGTGCT
GATCGTGGCCGTGCTGGCCGCCTTCGACCGCAGCGCTGTCACCCCCACTTTGCAGGAAACGCTGGAGCACTTTGGCGGCA
CGTTGCCGTTTATCCTGTTCGCCGTCATGGCCATCGGCGTGATGAAGGCCACGGGGTCCGAGCGGCTTCTGGACGGCGCG
TTCGCAGGCCGCGAGGCGCGGATGATCGTGGTCGGTGCCCTCGCGGGCGGCCTTTCGCCCTTTTGTTCCTGCGAGGTGAT
CCCCTTTGTGGCAGCCCTTCTGGCCGCTGGCGCACCGCTCAGCGCAGTTATGGCATTCTGGCTTGCCTCGCCCCTGATGG
ACCCCGCGATGTTTGTGGTCACAGCGGGCGGCATCGGGTTTGACTTCGCGGTTGCGAAAACCGTGGCCGCCGTGGCGCTT
GGCATCTTTGGCGGCGTGATGGTGATGACCTTCGCCCGCACGCCTGTTTTCGCCGACCCACTGCGCGAACAGCCCATGAA
AAGCGGATGCTGTGCGCCCAAGAAAACCACCTTGAACTGGCGTTTCTGGCAAGAGGCGGACCGCCGCGCGACATTTGCAC
AGGCCGCGTGGGACAATTTCATCTTCCTCGGCAAATGGTTGATGCTGGCCTATCTGCTGCAATCGCTGTTGATCTCTTAC
GTGCCTGCCGCGCTGATTGCGCAGGTTGTCGGCGGCGACGGGCTGATGCCGATTATCGTCGGTGCACTCGTGGGCGCGCC
CGCCTACCTCAACGGCTACGCCGCCGTTCCGCTGATTGCGGGTCTGCTGGAGCAGGGCATGAGCCCCGGAGCCGCCATGT
CCTTTGTCATTGCCGGAGGCGTCAGTTGCATCCCCGCAGCCGTCGCCGTCTGGGCGTTGGTGAAGCCCCGTGTTTTTGCA
GCCTACCTCGGCCTCGCCCTTGCGGGTGCAATCATTGCGGGTATGGTCTGGAGTGTGATCGCCTAA

Upstream 100 bases:

>100_bases
CGGCGCATTCTGTCGCGCATAGACCACCCGGCGATTGAAGCGTTGTCCGCGTTCCTTATCGCTGAATGCTGCGCCGATGC
TGGCGGACACGGAGATCACC

Downstream 100 bases:

>100_bases
GATATGGACGCCTCGCCGACCATTGGTCAGTCACCACAGGAGCGGCAAAACGGGGACACCCATGTATCGGGTCTGGAATT
TCATTACCGGATATTCACTG

Product: permease

Products: NA

Alternate protein names: Permease Superfamily; Permease Family Protein; Capsule Polysaccharide Transport

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MADQTLIPRVLPQIWGRIDKVALTFVLIVAVLAAFDRSAVTPTLQETLEHFGGTLPFILFAVMAIGVMKATGSERLLDGA
FAGREARMIVVGALAGGLSPFCSCEVIPFVAALLAAGAPLSAVMAFWLASPLMDPAMFVVTAGGIGFDFAVAKTVAAVAL
GIFGGVMVMTFARTPVFADPLREQPMKSGCCAPKKTTLNWRFWQEADRRATFAQAAWDNFIFLGKWLMLAYLLQSLLISY
VPAALIAQVVGGDGLMPIIVGALVGAPAYLNGYAAVPLIAGLLEQGMSPGAAMSFVIAGGVSCIPAAVAVWALVKPRVFA
AYLGLALAGAIIAGMVWSVIA

Sequences:

>Translated_341_residues
MADQTLIPRVLPQIWGRIDKVALTFVLIVAVLAAFDRSAVTPTLQETLEHFGGTLPFILFAVMAIGVMKATGSERLLDGA
FAGREARMIVVGALAGGLSPFCSCEVIPFVAALLAAGAPLSAVMAFWLASPLMDPAMFVVTAGGIGFDFAVAKTVAAVAL
GIFGGVMVMTFARTPVFADPLREQPMKSGCCAPKKTTLNWRFWQEADRRATFAQAAWDNFIFLGKWLMLAYLLQSLLISY
VPAALIAQVVGGDGLMPIIVGALVGAPAYLNGYAAVPLIAGLLEQGMSPGAAMSFVIAGGVSCIPAAVAVWALVKPRVFA
AYLGLALAGAIIAGMVWSVIA
>Mature_340_residues
ADQTLIPRVLPQIWGRIDKVALTFVLIVAVLAAFDRSAVTPTLQETLEHFGGTLPFILFAVMAIGVMKATGSERLLDGAF
AGREARMIVVGALAGGLSPFCSCEVIPFVAALLAAGAPLSAVMAFWLASPLMDPAMFVVTAGGIGFDFAVAKTVAAVALG
IFGGVMVMTFARTPVFADPLREQPMKSGCCAPKKTTLNWRFWQEADRRATFAQAAWDNFIFLGKWLMLAYLLQSLLISYV
PAALIAQVVGGDGLMPIIVGALVGAPAYLNGYAAVPLIAGLLEQGMSPGAAMSFVIAGGVSCIPAAVAVWALVKPRVFAA
YLGLALAGAIIAGMVWSVIA

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35582; Mature: 35451

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADQTLIPRVLPQIWGRIDKVALTFVLIVAVLAAFDRSAVTPTLQETLEHFGGTLPFILF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHH
AVMAIGVMKATGSERLLDGAFAGREARMIVVGALAGGLSPFCSCEVIPFVAALLAAGAPL
HHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEHHHCCCCHHHHHHHHHHHHHHHHCCCCH
SAVMAFWLASPLMDPAMFVVTAGGIGFDFAVAKTVAAVALGIFGGVMVMTFARTPVFADP
HHHHHHHHHHHCCCCHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCH
LREQPMKSGCCAPKKTTLNWRFWQEADRRATFAQAAWDNFIFLGKWLMLAYLLQSLLISY
HHHCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPAALIAQVVGGDGLMPIIVGALVGAPAYLNGYAAVPLIAGLLEQGMSPGAAMSFVIAGG
HHHHHHHHHHCCCCHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHCC
VSCIPAAVAVWALVKPRVFAAYLGLALAGAIIAGMVWSVIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
ADQTLIPRVLPQIWGRIDKVALTFVLIVAVLAAFDRSAVTPTLQETLEHFGGTLPFILF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHH
AVMAIGVMKATGSERLLDGAFAGREARMIVVGALAGGLSPFCSCEVIPFVAALLAAGAPL
HHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEHHHCCCCHHHHHHHHHHHHHHHHCCCCH
SAVMAFWLASPLMDPAMFVVTAGGIGFDFAVAKTVAAVALGIFGGVMVMTFARTPVFADP
HHHHHHHHHHHCCCCHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCH
LREQPMKSGCCAPKKTTLNWRFWQEADRRATFAQAAWDNFIFLGKWLMLAYLLQSLLISY
HHHCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPAALIAQVVGGDGLMPIIVGALVGAPAYLNGYAAVPLIAGLLEQGMSPGAAMSFVIAGG
HHHHHHHHHHCCCCHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHCC
VSCIPAAVAVWALVKPRVFAAYLGLALAGAIIAGMVWSVIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA