| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89056123
Identifier: 89056123
GI number: 89056123
Start: 3706817
End: 3707278
Strand: Direct
Name: 89056123
Synonym: Jann_3632
Alternate gene names: NA
Gene position: 3706817-3707278 (Clockwise)
Preceding gene: 89056122
Following gene: 89056128
Centisome position: 85.85
GC content: 63.85
Gene sequence:
>462_bases ATGTCCGGCCCGGTCGAGCGCTATAGCCCGCGTCGCGTCACCTATCTGGGCCTGTGGGAAGCCGGTCCCCTGCGGATGAA GGCCTACGGTCTGGAGGCCCGGGGCCACAACGTCAGCGAGGACGTGATCGCCCGCGCCCGCACGCTTCTGGACCACGATG TGACGTCAGCGGTCCGCGCAATGGGCGACAGCAATAACGTGGGCTTCGTGATCATCCACCCCGGAACGCTGGGTGTGTCC ATTTCCAGCTATTGGTGGGTTCAGGGGTCTGTCCTGTGCCACCACATGGTCCGGCAACTCTACAGCGCGCCGCAGCCGAT GGAAACGGCCAGCCGTCCGGTGATCGGTTGTGTGTGGGAGTTAGAGATCGTTGCGGCAGAGCAGGCCGCCTTCAAACGAC ACATGATGGGGCCGGACCACGACAGCGATGGGTATGTTGCGTCCAGGATCGCTGAGAGCTGA
Upstream 100 bases:
>100_bases GAGCGGCCAACCGGCACGCGCACTTATAACCGGGCCGCCAAACGCATGCAGCAGGCGCTGATCGAGCGTTGGGGCGCCGT TTACGCATGAGATTGCCGTG
Downstream 100 bases:
>100_bases ATGCAAAAAGGCCACCCAATCGGGCGGCCTTCTTTTGATGTATCAGGCAGTGCCTACACGTTGATCGAGTTGCCGCCTTT GGGGCCAGCGATCAACCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MSGPVERYSPRRVTYLGLWEAGPLRMKAYGLEARGHNVSEDVIARARTLLDHDVTSAVRAMGDSNNVGFVIIHPGTLGVS ISSYWWVQGSVLCHHMVRQLYSAPQPMETASRPVIGCVWELEIVAAEQAAFKRHMMGPDHDSDGYVASRIAES
Sequences:
>Translated_153_residues MSGPVERYSPRRVTYLGLWEAGPLRMKAYGLEARGHNVSEDVIARARTLLDHDVTSAVRAMGDSNNVGFVIIHPGTLGVS ISSYWWVQGSVLCHHMVRQLYSAPQPMETASRPVIGCVWELEIVAAEQAAFKRHMMGPDHDSDGYVASRIAES >Mature_152_residues SGPVERYSPRRVTYLGLWEAGPLRMKAYGLEARGHNVSEDVIARARTLLDHDVTSAVRAMGDSNNVGFVIIHPGTLGVSI SSYWWVQGSVLCHHMVRQLYSAPQPMETASRPVIGCVWELEIVAAEQAAFKRHMMGPDHDSDGYVASRIAES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16893; Mature: 16762
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGPVERYSPRRVTYLGLWEAGPLRMKAYGLEARGHNVSEDVIARARTLLDHDVTSAVRA CCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH MGDSNNVGFVIIHPGTLGVSISSYWWVQGSVLCHHMVRQLYSAPQPMETASRPVIGCVWE CCCCCCEEEEEECCCCEEEEECCEEEECHHHHHHHHHHHHHCCCCCCHHHCCCEEEEEEE LEIVAAEQAAFKRHMMGPDHDSDGYVASRIAES EEEEHHHHHHHHHHCCCCCCCCCCHHHHHHCCC >Mature Secondary Structure SGPVERYSPRRVTYLGLWEAGPLRMKAYGLEARGHNVSEDVIARARTLLDHDVTSAVRA CCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH MGDSNNVGFVIIHPGTLGVSISSYWWVQGSVLCHHMVRQLYSAPQPMETASRPVIGCVWE CCCCCCEEEEEECCCCEEEEECCEEEECHHHHHHHHHHHHHCCCCCCHHHCCCEEEEEEE LEIVAAEQAAFKRHMMGPDHDSDGYVASRIAES EEEEHHHHHHHHHHCCCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA