| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89056085
Identifier: 89056085
GI number: 89056085
Start: 3670899
End: 3671612
Strand: Direct
Name: 89056085
Synonym: Jann_3594
Alternate gene names: NA
Gene position: 3670899-3671612 (Clockwise)
Preceding gene: 89056084
Following gene: 89056088
Centisome position: 85.01
GC content: 63.03
Gene sequence:
>714_bases ATGACGCCACCTCCAACGCCTTCGTCCCAGGACATGGATCCGGTCTATCGCCTGAATGGCGTCGACCTGGCCGTGCCCGA TGGGCTGGCCAACGCTTCGATCATCGAGAAATTGGCCAACGGCACCTACGAGGAGGACGAAGCGCGATCCGTGGACCGCT GCGTGCGATCCGGCTTTCGGGTGTTGGAGCTGGGGGCTGGTCTTGGGTATGTCGGCACGCTGGCCGCCCGGAAGACCGAG CCCGGCAATGTGCTGTCGGTGGAGGCCAACCCGGACTTGATACCTGTGATCCGGTCCAATCACGCCCGCAACGGCGTGGA GGATATCAGCCTGATGCACGGCGCTGTCGTGGGCTACGCAGAGGAGGCTGCCACCGCGAGCTTCCATATTGCGGACGGTT TCACCGGTTCGCGCCTTGGGGCGCGCGGCGGGCGCCAGGTAGAGGTGCCGCTGATTGGGTTCCATGAGCTGATCCGCGCC CACCGCCCCCATGTGGTCCTGATGGATGTGGAGGGGGCAGAGGCGGCGTATTTCGACCGGTCCTGGAAATGTCCGCTTCG GTTTTGCGTGATGGAAATCCATCCCAAGCAATACGGCGCGGAGGTGATCAAGAAAATCATCGACCGGATGAGCGCTATGG ACATGACCTATGATCCGGTCACGTCACGGGGCAAGGTGCTTGGCTTCCGCAAGGTCTGGAGCGAGGGGACGTAG
Upstream 100 bases:
>100_bases CTGATTTCCACCGGAGCTTACCCTTTGGGGCTATGATCGCGGCGGCGGTGAGGCCCTCAAATCGCCAAAATCCCACGCTA TGGCCTGAGGCACGACAGAC
Downstream 100 bases:
>100_bases CCCCGCCCCAAGGCGGTCCCGATTTGGTCGCAATGGCGGGGTTCACCTCGCCCTACGGCTGGGTCGATTACGTTTTCTTC AGCCCCGCTCGATCAGCCCC
Product: methyltransferase FkbM
Products: NA
Alternate protein names: Methyltransferase FkbM Family; Methyltransferase FkbM; GSCFA Family; Methyltransferase FkbM Family Protein
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MTPPPTPSSQDMDPVYRLNGVDLAVPDGLANASIIEKLANGTYEEDEARSVDRCVRSGFRVLELGAGLGYVGTLAARKTE PGNVLSVEANPDLIPVIRSNHARNGVEDISLMHGAVVGYAEEAATASFHIADGFTGSRLGARGGRQVEVPLIGFHELIRA HRPHVVLMDVEGAEAAYFDRSWKCPLRFCVMEIHPKQYGAEVIKKIIDRMSAMDMTYDPVTSRGKVLGFRKVWSEGT
Sequences:
>Translated_237_residues MTPPPTPSSQDMDPVYRLNGVDLAVPDGLANASIIEKLANGTYEEDEARSVDRCVRSGFRVLELGAGLGYVGTLAARKTE PGNVLSVEANPDLIPVIRSNHARNGVEDISLMHGAVVGYAEEAATASFHIADGFTGSRLGARGGRQVEVPLIGFHELIRA HRPHVVLMDVEGAEAAYFDRSWKCPLRFCVMEIHPKQYGAEVIKKIIDRMSAMDMTYDPVTSRGKVLGFRKVWSEGT >Mature_236_residues TPPPTPSSQDMDPVYRLNGVDLAVPDGLANASIIEKLANGTYEEDEARSVDRCVRSGFRVLELGAGLGYVGTLAARKTEP GNVLSVEANPDLIPVIRSNHARNGVEDISLMHGAVVGYAEEAATASFHIADGFTGSRLGARGGRQVEVPLIGFHELIRAH RPHVVLMDVEGAEAAYFDRSWKCPLRFCVMEIHPKQYGAEVIKKIIDRMSAMDMTYDPVTSRGKVLGFRKVWSEGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25807; Mature: 25676
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPPPTPSSQDMDPVYRLNGVDLAVPDGLANASIIEKLANGTYEEDEARSVDRCVRSGFR CCCCCCCCCCCCCCCEEECCCEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCE VLELGAGLGYVGTLAARKTEPGNVLSVEANPDLIPVIRSNHARNGVEDISLMHGAVVGYA EEEECCCCCHHHHHHHCCCCCCCEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH EEAATASFHIADGFTGSRLGARGGRQVEVPLIGFHELIRAHRPHVVLMDVEGAEAAYFDR HHHCCEEEEEECCCCCCCCCCCCCCEEEEEEECHHHHHHHCCCCEEEEECCCCCEECCCC SWKCPLRFCVMEIHPKQYGAEVIKKIIDRMSAMDMTYDPVTSRGKVLGFRKVWSEGT CCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHCCCCC >Mature Secondary Structure TPPPTPSSQDMDPVYRLNGVDLAVPDGLANASIIEKLANGTYEEDEARSVDRCVRSGFR CCCCCCCCCCCCCCEEECCCEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCE VLELGAGLGYVGTLAARKTEPGNVLSVEANPDLIPVIRSNHARNGVEDISLMHGAVVGYA EEEECCCCCHHHHHHHCCCCCCCEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH EEAATASFHIADGFTGSRLGARGGRQVEVPLIGFHELIRAHRPHVVLMDVEGAEAAYFDR HHHCCEEEEEECCCCCCCCCCCCCCEEEEEEECHHHHHHHCCCCEEEEECCCCCEECCCC SWKCPLRFCVMEIHPKQYGAEVIKKIIDRMSAMDMTYDPVTSRGKVLGFRKVWSEGT CCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA