Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89056066

Identifier: 89056066

GI number: 89056066

Start: 3650290

End: 3650955

Strand: Direct

Name: 89056066

Synonym: Jann_3575

Alternate gene names: NA

Gene position: 3650290-3650955 (Clockwise)

Preceding gene: 89056063

Following gene: 89056067

Centisome position: 84.54

GC content: 55.71

Gene sequence:

>666_bases
ATGTCGAATATTGCGGGCAAAGCATATGCAATGAACGTATTAACCCCCAGCAATTCAAAGATTTCCTGGGTTAATCGCTT
GCTGTTCATGGCCTCTCGTGGGCTCCCGAAAAATCTGATGGGGCTGTTGGGCCTGTCGCTGATTCACTTCGCGCGCTGGG
TGATCATCAAGCCGCGCGACTGGCCAGACCTTGGTCAGGGCAAAGAGAAACTGCAACACGACTACATGCTGTTTTGCTCC
AATTTCAACGGTACGTGGGACCAATATATCGACGCATTCTCGGACGGTATTCCCGGCGGACTGGACATGTTCTGGTACGC
GTCTATCGGCTATCCCGAGTCGATCCCGATCACGCCATTTAAGGATTATATCACGTTCAATCAGGTCAATACCGATTATT
ACTACAACGCCACGCCCGGCTCGGCGCAGCGGGACGTCAAGACGAGCCTGCTGGTTTTTGATCAAGTGTTGAAGCTTGCT
GATATGCACGCCACAGCCTCGCCCGAGGATTTCGCAGCGGCCTATCATAAGGCGGCACTGAAGATGCAGAAGGGCCTCGG
CGATCCGGGCTTTGGGCCGGTCGCAAGCCTCGACACGGAGCGGGCCGAGGTCAACCGCAGGGACCTTCTTCCACCCTCTG
GTGTGGGGGGACCTGCCGATGCCTGA

Upstream 100 bases:

>100_bases
TCCTCAACTCGCGGTAACGTTGCGGCGTATTATTTATCACCTGAGTGGGCGTTTTTTTGCCCCCGGTGTGCGTATCCCTT
TTTAAATTAGTGAGGTTCCC

Downstream 100 bases:

>100_bases
TTTTGACAGCGGACACATTTTCCTGACCACATTGGCTCCGATCAAACCGGGCGCGCCCGCGGACCATCCCCAGTCTTCCT
ATGAGCAGCGCGCGCGCATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MSNIAGKAYAMNVLTPSNSKISWVNRLLFMASRGLPKNLMGLLGLSLIHFARWVIIKPRDWPDLGQGKEKLQHDYMLFCS
NFNGTWDQYIDAFSDGIPGGLDMFWYASIGYPESIPITPFKDYITFNQVNTDYYYNATPGSAQRDVKTSLLVFDQVLKLA
DMHATASPEDFAAAYHKAALKMQKGLGDPGFGPVASLDTERAEVNRRDLLPPSGVGGPADA

Sequences:

>Translated_221_residues
MSNIAGKAYAMNVLTPSNSKISWVNRLLFMASRGLPKNLMGLLGLSLIHFARWVIIKPRDWPDLGQGKEKLQHDYMLFCS
NFNGTWDQYIDAFSDGIPGGLDMFWYASIGYPESIPITPFKDYITFNQVNTDYYYNATPGSAQRDVKTSLLVFDQVLKLA
DMHATASPEDFAAAYHKAALKMQKGLGDPGFGPVASLDTERAEVNRRDLLPPSGVGGPADA
>Mature_220_residues
SNIAGKAYAMNVLTPSNSKISWVNRLLFMASRGLPKNLMGLLGLSLIHFARWVIIKPRDWPDLGQGKEKLQHDYMLFCSN
FNGTWDQYIDAFSDGIPGGLDMFWYASIGYPESIPITPFKDYITFNQVNTDYYYNATPGSAQRDVKTSLLVFDQVLKLAD
MHATASPEDFAAAYHKAALKMQKGLGDPGFGPVASLDTERAEVNRRDLLPPSGVGGPADA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24418; Mature: 24287

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNIAGKAYAMNVLTPSNSKISWVNRLLFMASRGLPKNLMGLLGLSLIHFARWVIIKPRD
CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEECCCC
WPDLGQGKEKLQHDYMLFCSNFNGTWDQYIDAFSDGIPGGLDMFWYASIGYPESIPITPF
CCCCCCHHHHHHHCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCH
KDYITFNQVNTDYYYNATPGSAQRDVKTSLLVFDQVLKLADMHATASPEDFAAAYHKAAL
HHHEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
KMQKGLGDPGFGPVASLDTERAEVNRRDLLPPSGVGGPADA
HHHHCCCCCCCCCCCCCCCHHHHCCHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SNIAGKAYAMNVLTPSNSKISWVNRLLFMASRGLPKNLMGLLGLSLIHFARWVIIKPRD
CCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEECCCC
WPDLGQGKEKLQHDYMLFCSNFNGTWDQYIDAFSDGIPGGLDMFWYASIGYPESIPITPF
CCCCCCHHHHHHHCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCH
KDYITFNQVNTDYYYNATPGSAQRDVKTSLLVFDQVLKLADMHATASPEDFAAAYHKAAL
HHHEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
KMQKGLGDPGFGPVASLDTERAEVNRRDLLPPSGVGGPADA
HHHHCCCCCCCCCCCCCCCHHHHCCHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA