Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89056037

Identifier: 89056037

GI number: 89056037

Start: 3610319

End: 3610801

Strand: Direct

Name: 89056037

Synonym: Jann_3546

Alternate gene names: NA

Gene position: 3610319-3610801 (Clockwise)

Preceding gene: 89056034

Following gene: 89056038

Centisome position: 83.61

GC content: 59.21

Gene sequence:

>483_bases
TTGTTTTTGGACGAAATCACCAATTCTGATGAGGAAACCCAAATTTGTCGCGCATACCGTGCCGTTGAGACAAAAACGAA
GGCAAGTCATCACATGATCGATGGTATCGGTTTGGCGGGCCCCTCTATCGGGCGGTCCAGGACAGACATGGTGCAGACCT
TGGTCGCGTTCGGCGGCAGGCGCCCTGTTCAAGATGGCCAGCGGTGCTCTCATGAGACAATCGAAGATACACGATTGGCC
GTGGTCGGGATGTTGCGCTGCCCCACACGCCATTGGGGCTGTGAAATGGACCAACGTCGTCCGCATGTGGCAGATGGGGA
TGCAACCGCGTCCGTCGGCACATCTGTCAGCACACACAGCGGAGACGGCAATGGGCGAACCAGCCCAACAGGCGAAGCCT
TTGCGGTGCGCGCGGACTGCGCCGCCACTGGCACAACGTCTTCGCATACCGAAGGGCGTCACGCGCACTGTCCGCGACAG
TGA

Upstream 100 bases:

>100_bases
CTGTGCCCTGTGGCTGGCCTTTGACGCCACCTACCAACGCCCTCCAAGGTGACGCACCAGGCATTCACCTCACAACCATA
AGAATTGCCAACTACTGGTT

Downstream 100 bases:

>100_bases
CTCGGATGGGGTACGCGCTTCGGTTTGAGCACTACTTGCTACTCACAGTTTCGGGAGGCGCGCGCCTTGAAGCAATACAT
GGTCATAGAACGGTTCAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MFLDEITNSDEETQICRAYRAVETKTKASHHMIDGIGLAGPSIGRSRTDMVQTLVAFGGRRPVQDGQRCSHETIEDTRLA
VVGMLRCPTRHWGCEMDQRRPHVADGDATASVGTSVSTHSGDGNGRTSPTGEAFAVRADCAATGTTSSHTEGRHAHCPRQ

Sequences:

>Translated_160_residues
MFLDEITNSDEETQICRAYRAVETKTKASHHMIDGIGLAGPSIGRSRTDMVQTLVAFGGRRPVQDGQRCSHETIEDTRLA
VVGMLRCPTRHWGCEMDQRRPHVADGDATASVGTSVSTHSGDGNGRTSPTGEAFAVRADCAATGTTSSHTEGRHAHCPRQ
>Mature_160_residues
MFLDEITNSDEETQICRAYRAVETKTKASHHMIDGIGLAGPSIGRSRTDMVQTLVAFGGRRPVQDGQRCSHETIEDTRLA
VVGMLRCPTRHWGCEMDQRRPHVADGDATASVGTSVSTHSGDGNGRTSPTGEAFAVRADCAATGTTSSHTEGRHAHCPRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17218; Mature: 17218

Theoretical pI: Translated: 6.99; Mature: 6.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLDEITNSDEETQICRAYRAVETKTKASHHMIDGIGLAGPSIGRSRTDMVQTLVAFGGR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCC
RPVQDGQRCSHETIEDTRLAVVGMLRCPTRHWGCEMDQRRPHVADGDATASVGTSVSTHS
CCCCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC
GDGNGRTSPTGEAFAVRADCAATGTTSSHTEGRHAHCPRQ
CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFLDEITNSDEETQICRAYRAVETKTKASHHMIDGIGLAGPSIGRSRTDMVQTLVAFGGR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCC
RPVQDGQRCSHETIEDTRLAVVGMLRCPTRHWGCEMDQRRPHVADGDATASVGTSVSTHS
CCCCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC
GDGNGRTSPTGEAFAVRADCAATGTTSSHTEGRHAHCPRQ
CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA