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The map label for this gene is 89056034

Identifier: 89056034

GI number: 89056034

Start: 3606965

End: 3607729

Strand: Direct

Name: 89056034

Synonym: Jann_3543

Alternate gene names: NA

Gene position: 3606965-3607729 (Clockwise)

Preceding gene: 89056030

Following gene: 89056037

Centisome position: 83.53

GC content: 52.16

Gene sequence:

>765_bases
ATGAATACTTCGATGTCAAATACAGCCCAAAAGTCCGTGGGGATCGTTGGGTTTGGAGCTTTCGGAAAACTGATTGCTCA
GAGCCTGCATGGGCATTTTGATTTGAAGGCCCACGACCCGCGATCAGACCATCACGATGTTGCAGCCAACCTCGGTGTAC
GTTTCACTTCTCTTGAAGCTGTCGCACGTTGCGACATGATCGTGATCGCGGCACCGGTATCGAGCTTCGAAGACGTTTTG
GTCTCGATTGCCACCGTCTGTCGTCCCGGGACGTTGGTAATTGATGTCGGATCTGTCAAAGTGCATCCCGCTGATCTGAT
GGAGAAACACCTGCCGGACTACGTCAATATTGTCGCGACCCATCCGTTATTTGGGCCGCAAAGTGCCTGCGATGGCATCA
AGGGGCTAAAAATTGCCGTTTGTCCAATTCGAGGGCTGAAGCATTGGCCACTCGCGGTGTTTCTCCGCAAACATCTTGGC
CTTCAGGTCATCATGACGACACCCCACGATCACGACCGGGAAGCGGCAACAGTTCAGGGTTTGACGCATCTGATTGCCAA
GGTATTACAGAGAATGGGGCCTCTACCTTCCAGAATGACGACCCGGAGCTTCGACCTGCTCGTTGAGGCCGTTTCGATGG
TGCAAACCGATGCTCCGGAAGTGTTTGATGCAATAGAGAAGGCGAATCCTTATTCGGCTGACATCAGGCGGAGTTTTTTC
GAATTGGCTCACAAACTGAGCGTTGAGTTGGAAAGCAACGTGTAA

Upstream 100 bases:

>100_bases
CGATAGCTGCGGACGACTTTGTCGTGAAATTTCCGCTGCCCAGACAGCGGTTTGAATTGAAGACGACCTCCTGCCTGGCG
GCAAGTTAGAGGTCACCAAG

Downstream 100 bases:

>100_bases
TTTGAACGACTTTTCCCGAAACGGACTCCGAGGGGTTCAAAGCCGATGTCTCGTCTCGTAGTGCGTGAAGTCGGGCGACT
TCAGATTCTACATGTGCGGC

Product: prephenate dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MNTSMSNTAQKSVGIVGFGAFGKLIAQSLHGHFDLKAHDPRSDHHDVAANLGVRFTSLEAVARCDMIVIAAPVSSFEDVL
VSIATVCRPGTLVIDVGSVKVHPADLMEKHLPDYVNIVATHPLFGPQSACDGIKGLKIAVCPIRGLKHWPLAVFLRKHLG
LQVIMTTPHDHDREAATVQGLTHLIAKVLQRMGPLPSRMTTRSFDLLVEAVSMVQTDAPEVFDAIEKANPYSADIRRSFF
ELAHKLSVELESNV

Sequences:

>Translated_254_residues
MNTSMSNTAQKSVGIVGFGAFGKLIAQSLHGHFDLKAHDPRSDHHDVAANLGVRFTSLEAVARCDMIVIAAPVSSFEDVL
VSIATVCRPGTLVIDVGSVKVHPADLMEKHLPDYVNIVATHPLFGPQSACDGIKGLKIAVCPIRGLKHWPLAVFLRKHLG
LQVIMTTPHDHDREAATVQGLTHLIAKVLQRMGPLPSRMTTRSFDLLVEAVSMVQTDAPEVFDAIEKANPYSADIRRSFF
ELAHKLSVELESNV
>Mature_254_residues
MNTSMSNTAQKSVGIVGFGAFGKLIAQSLHGHFDLKAHDPRSDHHDVAANLGVRFTSLEAVARCDMIVIAAPVSSFEDVL
VSIATVCRPGTLVIDVGSVKVHPADLMEKHLPDYVNIVATHPLFGPQSACDGIKGLKIAVCPIRGLKHWPLAVFLRKHLG
LQVIMTTPHDHDREAATVQGLTHLIAKVLQRMGPLPSRMTTRSFDLLVEAVSMVQTDAPEVFDAIEKANPYSADIRRSFF
ELAHKLSVELESNV

Specific function: Unknown

COG id: COG0287

COG function: function code E; Prephenate dehydrogenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR016040
- InterPro:   IPR005121
- InterPro:   IPR008299
- InterPro:   IPR003099 [H]

Pfam domain/function: PF03147 FDX-ACB; PF02153 PDH [H]

EC number: NA

Molecular weight: Translated: 27622; Mature: 27622

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTSMSNTAQKSVGIVGFGAFGKLIAQSLHGHFDLKAHDPRSDHHDVAANLGVRFTSLEA
CCCCCCCHHHHHCCEEEEHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHCCCEEHHHHH
VARCDMIVIAAPVSSFEDVLVSIATVCRPGTLVIDVGSVKVHPADLMEKHLPDYVNIVAT
HHHCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCEEECHHHHHHHHCCHHHHHHCC
HPLFGPQSACDGIKGLKIAVCPIRGLKHWPLAVFLRKHLGLQVIMTTPHDHDREAATVQG
CCCCCCHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHCCEEEEEECCCCCCCHHHHHHH
LTHLIAKVLQRMGPLPSRMTTRSFDLLVEAVSMVQTDAPEVFDAIEKANPYSADIRRSFF
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHH
ELAHKLSVELESNV
HHHHHHHHEECCCC
>Mature Secondary Structure
MNTSMSNTAQKSVGIVGFGAFGKLIAQSLHGHFDLKAHDPRSDHHDVAANLGVRFTSLEA
CCCCCCCHHHHHCCEEEEHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHCCCEEHHHHH
VARCDMIVIAAPVSSFEDVLVSIATVCRPGTLVIDVGSVKVHPADLMEKHLPDYVNIVAT
HHHCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCEEECHHHHHHHHCCHHHHHHCC
HPLFGPQSACDGIKGLKIAVCPIRGLKHWPLAVFLRKHLGLQVIMTTPHDHDREAATVQG
CCCCCCHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHCCEEEEEECCCCCCCHHHHHHH
LTHLIAKVLQRMGPLPSRMTTRSFDLLVEAVSMVQTDAPEVFDAIEKANPYSADIRRSFF
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHH
ELAHKLSVELESNV
HHHHHHHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]